Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HLA-DMAP28067 AC017071.1-201ENST00000564407 2204 ntBASIC2.98□□□□□ -1.93
HLA-DMAP28067 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
HLA-DMAP28067 AL356274.2-201ENST00000624379 3752 ntBASIC2.98□□□□□ -1.93
HLA-DMAP28067 AC117529.2-201ENST00000512159 2068 ntBASIC2.97□□□□□ -1.93
HLA-DMAP28067 AL122126.1-201ENST00000546905 1318 ntBASIC2.97□□□□□ -1.93
HLA-DMAP28067 MTND5P28-201ENST00000438005 1594 ntBASIC2.97□□□□□ -1.93
HLA-DMAP28067 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-DMAP28067 METTL21EP-201ENST00000298105 713 ntBASIC2.97□□□□□ -1.93
HLA-DMAP28067 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-DMAP28067 RNU6-213P-201ENST00000384051 104 ntBASIC2.97□□□□□ -1.93
HLA-DMAP28067 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
HLA-DMAP28067 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
HLA-DMAP28067 AL354719.1-201ENST00000406535 843 ntBASIC2.97□□□□□ -1.93
HLA-DMAP28067 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC2.97□□□□□ -1.93
HLA-DMAP28067 RPL32P35-201ENST00000415214 394 ntBASIC2.97□□□□□ -1.93
HLA-DMAP28067 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.97□□□□□ -1.93
HLA-DMAP28067 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.97□□□□□ -1.93
HLA-DMAP28067 AC245054.1-201ENST00000420944 258 ntBASIC2.97□□□□□ -1.93
HLA-DMAP28067 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.97□□□□□ -1.93
HLA-DMAP28067 RPL7P46-201ENST00000425129 740 ntBASIC2.97□□□□□ -1.93
HLA-DMAP28067 AL590623.1-201ENST00000427864 105 ntBASIC2.97□□□□□ -1.93
HLA-DMAP28067 UBE2V1P1-201ENST00000430836 445 ntBASIC2.97□□□□□ -1.93
HLA-DMAP28067 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.97□□□□□ -1.93
HLA-DMAP28067 TRIM60P13-201ENST00000432350 1283 ntBASIC2.97□□□□□ -1.93
HLA-DMAP28067 MTND2P21-201ENST00000436242 1042 ntBASIC2.97□□□□□ -1.93
HLA-DMAP28067 RPS27P5-201ENST00000444247 244 ntBASIC2.97□□□□□ -1.93
HLA-DMAP28067 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC2.97□□□□□ -1.93
HLA-DMAP28067 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC2.97□□□□□ -1.93
HLA-DMAP28067 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.97□□□□□ -1.93
HLA-DMAP28067 AL035407.2-201ENST00000454090 378 ntBASIC2.97□□□□□ -1.93
HLA-DMAP28067 AC007686.1-201ENST00000488511 463 ntBASIC2.97□□□□□ -1.93
HLA-DMAP28067 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.97□□□□□ -1.93
HLA-DMAP28067 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.97□□□□□ -1.93
HLA-DMAP28067 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC2.97□□□□□ -1.93
HLA-DMAP28067 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC2.97□□□□□ -1.93
HLA-DMAP28067 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC2.97□□□□□ -1.93
HLA-DMAP28067 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.97□□□□□ -1.93
HLA-DMAP28067 SNORD59.2-201ENST00000516873 68 ntBASIC2.97□□□□□ -1.93
HLA-DMAP28067 SCARNA20.6-201ENST00000517251 106 ntBASIC2.97□□□□□ -1.93
HLA-DMAP28067 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC2.97□□□□□ -1.93
HLA-DMAP28067 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC2.97□□□□□ -1.93
HLA-DMAP28067 PTS-202ENST00000524931 696 ntTSL 3 BASIC2.97□□□□□ -1.93
HLA-DMAP28067 MED28P5-201ENST00000528254 438 ntBASIC2.97□□□□□ -1.93
HLA-DMAP28067 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.97□□□□□ -1.93
HLA-DMAP28067 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC2.97□□□□□ -1.93
HLA-DMAP28067 AC023575.1-201ENST00000580510 358 ntBASIC2.97□□□□□ -1.93
HLA-DMAP28067 MIR3939-201ENST00000582614 106 ntBASIC2.97□□□□□ -1.93
HLA-DMAP28067 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC2.97□□□□□ -1.93
HLA-DMAP28067 AC068790.4-201ENST00000602474 263 ntBASIC2.97□□□□□ -1.93
HLA-DMAP28067 AL133393.1-201ENST00000603277 287 ntBASIC2.97□□□□□ -1.93
HLA-DMAP28067 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
HLA-DMAP28067 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
HLA-DMAP28067 AC073342.3-201ENST00000624211 193 ntBASIC2.97□□□□□ -1.93
HLA-DMAP28067 OR52H1-202ENST00000641796 1061 ntBASIC2.97□□□□□ -1.93
HLA-DMAP28067 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.97□□□□□ -1.93
HLA-DMAP28067 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-DMAP28067 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-DMAP28067 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
HLA-DMAP28067 FAM35CP-201ENST00000554755 2470 ntBASIC2.96□□□□□ -1.94
HLA-DMAP28067 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HLA-DMAP28067 OR5T3-201ENST00000303059 1023 ntBASIC2.96□□□□□ -1.94
HLA-DMAP28067 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
HLA-DMAP28067 RPL7P60-201ENST00000397636 735 ntBASIC2.96□□□□□ -1.94
HLA-DMAP28067 AL022722.2-201ENST00000402519 180 ntBASIC2.96□□□□□ -1.94
HLA-DMAP28067 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.96□□□□□ -1.94
HLA-DMAP28067 SFR1P1-201ENST00000403720 688 ntBASIC2.96□□□□□ -1.94
HLA-DMAP28067 RPS20P25-201ENST00000412447 352 ntBASIC2.96□□□□□ -1.94
HLA-DMAP28067 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC2.96□□□□□ -1.94
HLA-DMAP28067 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DMAP28067 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DMAP28067 AL591419.1-201ENST00000427423 339 ntBASIC2.96□□□□□ -1.94
HLA-DMAP28067 RPS7P2-201ENST00000435134 607 ntBASIC2.96□□□□□ -1.94
HLA-DMAP28067 TRIM60P18-201ENST00000441518 828 ntBASIC2.96□□□□□ -1.94
HLA-DMAP28067 RPL17P49-201ENST00000443728 411 ntBASIC2.96□□□□□ -1.94
HLA-DMAP28067 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DMAP28067 RPS29P33-201ENST00000456717 146 ntBASIC2.96□□□□□ -1.94
HLA-DMAP28067 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC2.96□□□□□ -1.94
HLA-DMAP28067 snoU13.24-201ENST00000458998 104 ntBASIC2.96□□□□□ -1.94
HLA-DMAP28067 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HLA-DMAP28067 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.96□□□□□ -1.94
HLA-DMAP28067 FTH1P21-201ENST00000512179 511 ntBASIC2.96□□□□□ -1.94
HLA-DMAP28067 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC2.96□□□□□ -1.94
HLA-DMAP28067 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DMAP28067 SERPINE4P-201ENST00000554978 281 ntBASIC2.96□□□□□ -1.94
HLA-DMAP28067 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC2.96□□□□□ -1.94
HLA-DMAP28067 AL009028.1-201ENST00000604895 802 ntBASIC2.96□□□□□ -1.94
HLA-DMAP28067 AL591034.3-201ENST00000605511 685 ntBASIC2.96□□□□□ -1.94
HLA-DMAP28067 AC015802.5-201ENST00000607478 399 ntBASIC2.96□□□□□ -1.94
HLA-DMAP28067 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HLA-DMAP28067 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC2.96□□□□□ -1.94
HLA-DMAP28067 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC2.96□□□□□ -1.94
HLA-DMAP28067 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DMAP28067 AC009501.3-201ENST00000605001 1352 ntBASIC2.96□□□□□ -1.94
HLA-DMAP28067 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HLA-DMAP28067 MFSD8-233ENST00000641482 4860 ntBASIC2.96□□□□□ -1.94
HLA-DMAP28067 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HLA-DMAP28067 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HLA-DMAP28067 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
HLA-DMAP28067 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms