Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.88□□□□□ -1.63
POLR2AP24928 RNU6-1263P-201ENST00000384601 106 ntBASIC4.88□□□□□ -1.63
POLR2AP24928 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
POLR2AP24928 TCEA1P4-201ENST00000415066 844 ntBASIC4.88□□□□□ -1.63
POLR2AP24928 NPM1P11-201ENST00000417106 855 ntBASIC4.88□□□□□ -1.63
POLR2AP24928 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.88□□□□□ -1.63
POLR2AP24928 HMGB1P45-201ENST00000435986 653 ntBASIC4.88□□□□□ -1.63
POLR2AP24928 ELOCP10-201ENST00000440624 327 ntBASIC4.88□□□□□ -1.63
POLR2AP24928 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.88□□□□□ -1.63
POLR2AP24928 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC4.88□□□□□ -1.63
POLR2AP24928 MTCO3P11-201ENST00000455103 774 ntBASIC4.88□□□□□ -1.63
POLR2AP24928 SUMO2P2-201ENST00000456482 255 ntBASIC4.88□□□□□ -1.63
POLR2AP24928 RPL7P18-201ENST00000478965 734 ntBASIC4.88□□□□□ -1.63
POLR2AP24928 PPIAP15-201ENST00000479662 484 ntBASIC4.88□□□□□ -1.63
POLR2AP24928 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
POLR2AP24928 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.88□□□□□ -1.63
POLR2AP24928 AP001207.1-201ENST00000524051 481 ntBASIC4.88□□□□□ -1.63
POLR2AP24928 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
POLR2AP24928 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
POLR2AP24928 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.88□□□□□ -1.63
POLR2AP24928 CYP2C60P-201ENST00000566088 139 ntBASIC4.88□□□□□ -1.63
POLR2AP24928 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.88□□□□□ -1.63
POLR2AP24928 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.88□□□□□ -1.63
POLR2AP24928 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC4.88□□□□□ -1.63
POLR2AP24928 ELOCP34-201ENST00000604436 327 ntBASIC4.88□□□□□ -1.63
POLR2AP24928 AL592436.1-201ENST00000605135 558 ntBASIC4.88□□□□□ -1.63
POLR2AP24928 AC124864.2-201ENST00000624736 186 ntBASIC4.88□□□□□ -1.63
POLR2AP24928 SEPT14P19-203ENST00000633205 211 ntBASIC4.88□□□□□ -1.63
POLR2AP24928 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.88□□□□□ -1.63
POLR2AP24928 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.88□□□□□ -1.63
POLR2AP24928 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
POLR2AP24928 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
POLR2AP24928 CR848007.1-201ENST00000442354 1699 ntBASIC4.88□□□□□ -1.63
POLR2AP24928 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
POLR2AP24928 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
POLR2AP24928 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.88□□□□□ -1.63
POLR2AP24928 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC4.88□□□□□ -1.63
POLR2AP24928 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC4.88□□□□□ -1.63
POLR2AP24928 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
POLR2AP24928 MAPK10-286ENST00000641208 8747 ntBASIC4.87□□□□□ -1.63
POLR2AP24928 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
POLR2AP24928 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
POLR2AP24928 RNU1-83P-201ENST00000363426 164 ntBASIC4.87□□□□□ -1.63
POLR2AP24928 RNU6-1042P-201ENST00000384204 107 ntBASIC4.87□□□□□ -1.63
POLR2AP24928 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.87□□□□□ -1.63
POLR2AP24928 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.87□□□□□ -1.63
POLR2AP24928 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.87□□□□□ -1.63
POLR2AP24928 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.87□□□□□ -1.63
POLR2AP24928 EPS15P1-201ENST00000448836 336 ntBASIC4.87□□□□□ -1.63
POLR2AP24928 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4.87□□□□□ -1.63
POLR2AP24928 RPS29P19-201ENST00000479709 171 ntBASIC4.87□□□□□ -1.63
POLR2AP24928 AC147055.4-201ENST00000504399 745 ntBASIC4.87□□□□□ -1.63
POLR2AP24928 PRELID3BP4-201ENST00000515476 571 ntBASIC4.87□□□□□ -1.63
POLR2AP24928 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.87□□□□□ -1.63
POLR2AP24928 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.87□□□□□ -1.63
POLR2AP24928 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.87□□□□□ -1.63
POLR2AP24928 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.87□□□□□ -1.63
POLR2AP24928 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4.87□□□□□ -1.63
POLR2AP24928 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.87□□□□□ -1.63
POLR2AP24928 WISP1-OT1-201ENST00000602893 642 ntBASIC4.87□□□□□ -1.63
POLR2AP24928 SUMO2P14-201ENST00000604488 293 ntBASIC4.87□□□□□ -1.63
POLR2AP24928 AL390816.3-201ENST00000604527 1066 ntBASIC4.87□□□□□ -1.63
POLR2AP24928 AL160290.3-201ENST00000604869 165 ntBASIC4.87□□□□□ -1.63
POLR2AP24928 AL159169.3-201ENST00000608871 561 ntBASIC4.87□□□□□ -1.63
POLR2AP24928 AL391261.4-201ENST00000616012 481 ntBASIC4.87□□□□□ -1.63
POLR2AP24928 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.87□□□□□ -1.63
POLR2AP24928 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.87□□□□□ -1.63
POLR2AP24928 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.87□□□□□ -1.63
POLR2AP24928 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
POLR2AP24928 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
POLR2AP24928 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.87□□□□□ -1.63
POLR2AP24928 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.87□□□□□ -1.63
POLR2AP24928 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
POLR2AP24928 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
POLR2AP24928 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.87□□□□□ -1.63
POLR2AP24928 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
POLR2AP24928 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
POLR2AP24928 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
POLR2AP24928 RNU6-549P-201ENST00000384433 107 ntBASIC4.87□□□□□ -1.63
POLR2AP24928 AL139098.1-201ENST00000407291 389 ntBASIC4.87□□□□□ -1.63
POLR2AP24928 AP000907.1-201ENST00000428428 510 ntBASIC4.87□□□□□ -1.63
POLR2AP24928 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.87□□□□□ -1.63
POLR2AP24928 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.87□□□□□ -1.63
POLR2AP24928 AL353898.1-201ENST00000444055 238 ntBASIC4.87□□□□□ -1.63
POLR2AP24928 NANOGNBP1-201ENST00000448444 480 ntBASIC4.87□□□□□ -1.63
POLR2AP24928 RNU6-956P-201ENST00000458868 103 ntBASIC4.87□□□□□ -1.63
POLR2AP24928 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.87□□□□□ -1.63
POLR2AP24928 GAPDHP39-201ENST00000481866 979 ntBASIC4.87□□□□□ -1.63
POLR2AP24928 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.87□□□□□ -1.63
POLR2AP24928 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.87□□□□□ -1.63
POLR2AP24928 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.87□□□□□ -1.63
POLR2AP24928 AC091516.1-201ENST00000549191 703 ntBASIC4.87□□□□□ -1.63
POLR2AP24928 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.87□□□□□ -1.63
POLR2AP24928 HMGB2P1-201ENST00000591146 634 ntBASIC4.87□□□□□ -1.63
POLR2AP24928 LSM1P2-201ENST00000604911 322 ntBASIC4.87□□□□□ -1.63
POLR2AP24928 AC126118.1-201ENST00000607744 628 ntBASIC4.87□□□□□ -1.63
POLR2AP24928 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
POLR2AP24928 AL353726.1-201ENST00000614041 1000 ntBASIC4.87□□□□□ -1.63
POLR2AP24928 AC063943.3-201ENST00000615562 356 ntBASIC4.87□□□□□ -1.63
POLR2AP24928 AL136981.2-201ENST00000617319 734 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms