Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 TPTE2P4-201ENST00000258589 1605 ntBASIC5.25□□□□□ -1.57
VAMP1P23763 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.25□□□□□ -1.57
VAMP1P23763 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
VAMP1P23763 MTND4P29-201ENST00000503122 1372 ntBASIC5.25□□□□□ -1.57
VAMP1P23763 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.25□□□□□ -1.57
VAMP1P23763 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VAMP1P23763 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VAMP1P23763 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VAMP1P23763 OR4G2P-202ENST00000641004 1759 ntBASIC5.24□□□□□ -1.57
VAMP1P23763 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.24□□□□□ -1.57
VAMP1P23763 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VAMP1P23763 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VAMP1P23763 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VAMP1P23763 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VAMP1P23763 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VAMP1P23763 RNA5SP321-201ENST00000362722 111 ntBASIC5.24□□□□□ -1.57
VAMP1P23763 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.24□□□□□ -1.57
VAMP1P23763 SNORA36C-201ENST00000384289 132 ntBASIC5.24□□□□□ -1.57
VAMP1P23763 MIR607-201ENST00000385241 96 ntBASIC5.24□□□□□ -1.57
VAMP1P23763 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC5.24□□□□□ -1.57
VAMP1P23763 BTF3L4P3-201ENST00000418879 476 ntBASIC5.24□□□□□ -1.57
VAMP1P23763 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC5.24□□□□□ -1.57
VAMP1P23763 AC110995.1-202ENST00000422914 860 ntTSL 3 BASIC5.24□□□□□ -1.57
VAMP1P23763 HMGN2P27-201ENST00000427352 270 ntBASIC5.24□□□□□ -1.57
VAMP1P23763 FTH1P6-201ENST00000430768 320 ntBASIC5.24□□□□□ -1.57
VAMP1P23763 MTND3P23-201ENST00000431980 347 ntBASIC5.24□□□□□ -1.57
VAMP1P23763 HMGB3P24-201ENST00000433260 622 ntBASIC5.24□□□□□ -1.57
VAMP1P23763 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.24□□□□□ -1.57
VAMP1P23763 AC007547.1-201ENST00000462177 490 ntBASIC5.24□□□□□ -1.57
VAMP1P23763 AP000926.1-201ENST00000479573 241 ntBASIC5.24□□□□□ -1.57
VAMP1P23763 AC078817.1-201ENST00000492623 435 ntBASIC5.24□□□□□ -1.57
VAMP1P23763 AC091951.2-201ENST00000500762 203 ntBASIC5.24□□□□□ -1.57
VAMP1P23763 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VAMP1P23763 AC008945.1-201ENST00000505144 499 ntBASIC5.24□□□□□ -1.57
VAMP1P23763 HMGB1P22-201ENST00000505315 124 ntBASIC5.24□□□□□ -1.57
VAMP1P23763 AC108475.1-201ENST00000507880 950 ntBASIC5.24□□□□□ -1.57
VAMP1P23763 RBBP4P6-201ENST00000508098 202 ntBASIC5.24□□□□□ -1.57
VAMP1P23763 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.24□□□□□ -1.57
VAMP1P23763 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.24□□□□□ -1.57
VAMP1P23763 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.24□□□□□ -1.57
VAMP1P23763 MTND6P2-201ENST00000512226 524 ntBASIC5.24□□□□□ -1.57
VAMP1P23763 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC5.24□□□□□ -1.57
VAMP1P23763 RNU6-875P-201ENST00000516488 106 ntBASIC5.24□□□□□ -1.57
VAMP1P23763 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC5.24□□□□□ -1.57
VAMP1P23763 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.24□□□□□ -1.57
VAMP1P23763 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.24□□□□□ -1.57
VAMP1P23763 MED28P6-201ENST00000558776 231 ntBASIC5.24□□□□□ -1.57
VAMP1P23763 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC5.24□□□□□ -1.57
VAMP1P23763 AC093591.2-201ENST00000565254 3843 ntBASIC5.24□□□□□ -1.57
VAMP1P23763 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC5.24□□□□□ -1.57
VAMP1P23763 AC005668.1-201ENST00000571142 476 ntBASIC5.24□□□□□ -1.57
VAMP1P23763 MIR3921-201ENST00000577308 85 ntBASIC5.24□□□□□ -1.57
VAMP1P23763 MIR4428-201ENST00000584884 73 ntBASIC5.24□□□□□ -1.57
VAMP1P23763 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC5.24□□□□□ -1.57
VAMP1P23763 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC5.24□□□□□ -1.57
VAMP1P23763 ZNF85-206ENST00000596476 1259 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VAMP1P23763 COX6CP7-201ENST00000597056 208 ntBASIC5.24□□□□□ -1.57
VAMP1P23763 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.24□□□□□ -1.57
VAMP1P23763 AL390877.1-201ENST00000605704 214 ntBASIC5.24□□□□□ -1.57
VAMP1P23763 AC104117.5-201ENST00000606195 547 ntBASIC5.24□□□□□ -1.57
VAMP1P23763 AC009994.1-201ENST00000606889 253 ntBASIC5.24□□□□□ -1.57
VAMP1P23763 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.24□□□□□ -1.57
VAMP1P23763 pRNA.9-201ENST00000618609 89 ntBASIC5.24□□□□□ -1.57
VAMP1P23763 AC104985.2-201ENST00000620598 500 ntBASIC5.24□□□□□ -1.57
VAMP1P23763 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC5.24□□□□□ -1.57
VAMP1P23763 C2orf27A-204ENST00000623058 969 ntBASIC5.24□□□□□ -1.57
VAMP1P23763 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC5.24□□□□□ -1.57
VAMP1P23763 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VAMP1P23763 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VAMP1P23763 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.24□□□□□ -1.57
VAMP1P23763 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
VAMP1P23763 AP001273.1-201ENST00000624493 3152 ntBASIC5.24□□□□□ -1.57
VAMP1P23763 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.24□□□□□ -1.57
VAMP1P23763 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VAMP1P23763 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VAMP1P23763 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.24□□□□□ -1.57
VAMP1P23763 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
VAMP1P23763 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VAMP1P23763 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.23□□□□□ -1.57
VAMP1P23763 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VAMP1P23763 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VAMP1P23763 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
VAMP1P23763 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VAMP1P23763 Y_RNA.279-201ENST00000364763 95 ntBASIC5.23□□□□□ -1.57
VAMP1P23763 Y_RNA.373-201ENST00000365600 103 ntBASIC5.23□□□□□ -1.57
VAMP1P23763 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
VAMP1P23763 RN7SKP177-201ENST00000410567 355 ntBASIC5.23□□□□□ -1.57
VAMP1P23763 AL590383.1-201ENST00000428602 75 ntBASIC5.23□□□□□ -1.57
VAMP1P23763 AL591212.2-201ENST00000433923 257 ntBASIC5.23□□□□□ -1.57
VAMP1P23763 C5orf24-203ENST00000435259 851 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
VAMP1P23763 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.23□□□□□ -1.57
VAMP1P23763 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC5.23□□□□□ -1.57
VAMP1P23763 AL118520.1-201ENST00000450770 291 ntBASIC5.23□□□□□ -1.57
VAMP1P23763 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC5.23□□□□□ -1.57
VAMP1P23763 RPL23AP11-201ENST00000475260 469 ntBASIC5.23□□□□□ -1.57
VAMP1P23763 AC083982.1-201ENST00000485679 344 ntBASIC5.23□□□□□ -1.57
VAMP1P23763 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC5.23□□□□□ -1.57
VAMP1P23763 HMGN1P12-201ENST00000499125 195 ntBASIC5.23□□□□□ -1.57
VAMP1P23763 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
VAMP1P23763 MRPS33P2-201ENST00000507850 322 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms