Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 AC022878.1-201ENST00000530684 149 ntBASIC5.01□□□□□ -1.61
XPAP23025 OR5D15P-201ENST00000531671 942 ntBASIC5.01□□□□□ -1.61
XPAP23025 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC5.01□□□□□ -1.61
XPAP23025 AC124947.2-202ENST00000552735 133 ntBASIC5.01□□□□□ -1.61
XPAP23025 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.01□□□□□ -1.61
XPAP23025 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.01□□□□□ -1.61
XPAP23025 AC009977.1-201ENST00000586015 570 ntBASIC5.01□□□□□ -1.61
XPAP23025 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC5.01□□□□□ -1.61
XPAP23025 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.01□□□□□ -1.61
XPAP23025 AL161729.4-201ENST00000604650 476 ntBASIC5.01□□□□□ -1.61
XPAP23025 AC090578.1-201ENST00000604955 591 ntBASIC5.01□□□□□ -1.61
XPAP23025 AC091965.4-201ENST00000607691 587 ntBASIC5.01□□□□□ -1.61
XPAP23025 AP001521.2-201ENST00000608772 546 ntBASIC5.01□□□□□ -1.61
XPAP23025 AC109347.2-201ENST00000610220 349 ntBASIC5.01□□□□□ -1.61
XPAP23025 AC090970.3-201ENST00000612566 866 ntBASIC5.01□□□□□ -1.61
XPAP23025 U4.5-201ENST00000617137 123 ntBASIC5.01□□□□□ -1.61
XPAP23025 AP001784.1-201ENST00000624107 428 ntBASIC5.01□□□□□ -1.61
XPAP23025 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
XPAP23025 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
XPAP23025 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
XPAP23025 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
XPAP23025 AC104260.2-201ENST00000623551 3497 ntBASIC5.01□□□□□ -1.61
XPAP23025 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.01□□□□□ -1.61
XPAP23025 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.01□□□□□ -1.61
XPAP23025 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
XPAP23025 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
XPAP23025 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
XPAP23025 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
XPAP23025 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
XPAP23025 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
XPAP23025 XPOTP1-201ENST00000443317 2398 ntBASIC5□□□□□ -1.61
XPAP23025 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5□□□□□ -1.61
XPAP23025 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5□□□□□ -1.61
XPAP23025 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5□□□□□ -1.61
XPAP23025 IRF5P1-201ENST00000504852 2164 ntBASIC5□□□□□ -1.61
XPAP23025 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
XPAP23025 SNORA51.6-201ENST00000384151 125 ntBASIC5□□□□□ -1.61
XPAP23025 RNU6-769P-201ENST00000384407 104 ntBASIC5□□□□□ -1.61
XPAP23025 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC5□□□□□ -1.61
XPAP23025 AL109941.1-201ENST00000401925 229 ntBASIC5□□□□□ -1.61
XPAP23025 RPS3AP3-201ENST00000411933 242 ntBASIC5□□□□□ -1.61
XPAP23025 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC5□□□□□ -1.61
XPAP23025 ISCA1P1-201ENST00000426679 387 ntBASIC5□□□□□ -1.61
XPAP23025 AC104837.2-201ENST00000427236 424 ntBASIC5□□□□□ -1.61
XPAP23025 TRIM60P3Y-201ENST00000432201 673 ntBASIC5□□□□□ -1.61
XPAP23025 SNRPEP7-201ENST00000438350 220 ntBASIC5□□□□□ -1.61
XPAP23025 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5□□□□□ -1.61
XPAP23025 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC5□□□□□ -1.61
XPAP23025 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC5□□□□□ -1.61
XPAP23025 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC5□□□□□ -1.61
XPAP23025 CYCSP24-201ENST00000445119 316 ntBASIC5□□□□□ -1.61
XPAP23025 FGF7P6-202ENST00000451282 293 ntBASIC5□□□□□ -1.61
XPAP23025 PRPF38AP1-201ENST00000451976 933 ntBASIC5□□□□□ -1.61
XPAP23025 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5□□□□□ -1.61
XPAP23025 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5□□□□□ -1.61
XPAP23025 SNRPFP4-201ENST00000456366 242 ntBASIC5□□□□□ -1.61
XPAP23025 snoU109.1-201ENST00000459339 135 ntBASIC5□□□□□ -1.61
XPAP23025 RPS3AP41-201ENST00000462701 778 ntBASIC5□□□□□ -1.61
XPAP23025 AP000942.1-201ENST00000463969 747 ntBASIC5□□□□□ -1.61
XPAP23025 RPL7P22-201ENST00000466005 733 ntBASIC5□□□□□ -1.61
XPAP23025 RPS23P1-201ENST00000491662 432 ntBASIC5□□□□□ -1.61
XPAP23025 AC106872.3-201ENST00000495104 446 ntBASIC5□□□□□ -1.61
XPAP23025 AC091133.4-201ENST00000511142 308 ntBASIC5□□□□□ -1.61
XPAP23025 KCTD9P2-201ENST00000512203 1013 ntBASIC5□□□□□ -1.61
XPAP23025 AC108064.1-201ENST00000513791 460 ntBASIC5□□□□□ -1.61
XPAP23025 AC022483.1-201ENST00000514020 567 ntBASIC5□□□□□ -1.61
XPAP23025 SNORA18.6-201ENST00000516792 115 ntBASIC5□□□□□ -1.61
XPAP23025 RNA5SP230-201ENST00000517039 122 ntBASIC5□□□□□ -1.61
XPAP23025 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5□□□□□ -1.61
XPAP23025 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC5□□□□□ -1.61
XPAP23025 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5□□□□□ -1.61
XPAP23025 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC5□□□□□ -1.61
XPAP23025 AC008033.2-201ENST00000542626 177 ntBASIC5□□□□□ -1.61
XPAP23025 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5□□□□□ -1.61
XPAP23025 AC008127.2-201ENST00000549925 1075 ntBASIC5□□□□□ -1.61
XPAP23025 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5□□□□□ -1.61
XPAP23025 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5□□□□□ -1.61
XPAP23025 HSPE1P3-201ENST00000559254 309 ntBASIC5□□□□□ -1.61
XPAP23025 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5□□□□□ -1.61
XPAP23025 AL022154.1-201ENST00000604698 785 ntBASIC5□□□□□ -1.61
XPAP23025 AL109618.2-201ENST00000605527 211 ntBASIC5□□□□□ -1.61
XPAP23025 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5□□□□□ -1.61
XPAP23025 AC100827.5-201ENST00000615883 426 ntBASIC5□□□□□ -1.61
XPAP23025 AC099654.13-201ENST00000639774 207 ntBASIC5□□□□□ -1.61
XPAP23025 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5□□□□□ -1.61
XPAP23025 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
XPAP23025 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
XPAP23025 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
XPAP23025 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
XPAP23025 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC5□□□□□ -1.61
XPAP23025 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
XPAP23025 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
XPAP23025 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
XPAP23025 AC021242.1-201ENST00000507315 2035 ntBASIC4.99□□□□□ -1.61
XPAP23025 AC004520.1-201ENST00000608362 1413 ntBASIC4.99□□□□□ -1.61
XPAP23025 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.99□□□□□ -1.61
XPAP23025 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
XPAP23025 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
XPAP23025 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.99□□□□□ -1.61
XPAP23025 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms