Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.3□□□□□ -1.72
CAPN3P20807 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CAPN3P20807 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.3□□□□□ -1.72
CAPN3P20807 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.3□□□□□ -1.72
CAPN3P20807 AL512347.1-201ENST00000566420 503 ntBASIC4.3□□□□□ -1.72
CAPN3P20807 LARP7P2-201ENST00000575306 125 ntBASIC4.3□□□□□ -1.72
CAPN3P20807 MAGOH2P-202ENST00000584384 429 ntBASIC4.3□□□□□ -1.72
CAPN3P20807 BPIFA4P-203ENST00000603168 689 ntBASIC4.3□□□□□ -1.72
CAPN3P20807 DUXAP3-201ENST00000603616 594 ntBASIC4.3□□□□□ -1.72
CAPN3P20807 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CAPN3P20807 AC009237.17-201ENST00000618111 748 ntBASIC4.3□□□□□ -1.72
CAPN3P20807 U3.53-201ENST00000628922 216 ntBASIC4.3□□□□□ -1.72
CAPN3P20807 AC097714.1-201ENST00000511272 1647 ntBASIC4.3□□□□□ -1.72
CAPN3P20807 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CAPN3P20807 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
CAPN3P20807 AL133383.2-201ENST00000622958 2336 ntBASIC4.3□□□□□ -1.72
CAPN3P20807 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CAPN3P20807 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CAPN3P20807 AL049780.3-201ENST00000624612 1583 ntBASIC4.3□□□□□ -1.72
CAPN3P20807 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CAPN3P20807 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CAPN3P20807 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.3□□□□□ -1.72
CAPN3P20807 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.3□□□□□ -1.72
CAPN3P20807 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
CAPN3P20807 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CAPN3P20807 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.29□□□□□ -1.72
CAPN3P20807 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CAPN3P20807 MARK2P15-201ENST00000432204 2186 ntBASIC4.29□□□□□ -1.72
CAPN3P20807 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CAPN3P20807 LINC00622-201ENST00000562811 1570 ntBASIC4.29□□□□□ -1.72
CAPN3P20807 AC097504.1-201ENST00000515103 2415 ntBASIC4.29□□□□□ -1.72
CAPN3P20807 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CAPN3P20807 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.29□□□□□ -1.72
CAPN3P20807 RNA5SP307-201ENST00000362863 116 ntBASIC4.29□□□□□ -1.72
CAPN3P20807 SNORD116.1-201ENST00000365628 92 ntBASIC4.29□□□□□ -1.72
CAPN3P20807 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.29□□□□□ -1.72
CAPN3P20807 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CAPN3P20807 HMGB1P17-201ENST00000403495 628 ntBASIC4.29□□□□□ -1.72
CAPN3P20807 SNORA74C-2-201ENST00000411179 201 ntBASIC4.29□□□□□ -1.72
CAPN3P20807 AC068533.2-201ENST00000411872 306 ntBASIC4.29□□□□□ -1.72
CAPN3P20807 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.29□□□□□ -1.72
CAPN3P20807 CRYBB2P1-203ENST00000415709 538 ntBASIC4.29□□□□□ -1.72
CAPN3P20807 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.29□□□□□ -1.72
CAPN3P20807 MTATP6P27-201ENST00000416987 621 ntBASIC4.29□□□□□ -1.72
CAPN3P20807 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.29□□□□□ -1.72
CAPN3P20807 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.29□□□□□ -1.72
CAPN3P20807 AL592293.2-201ENST00000422292 996 ntBASIC4.29□□□□□ -1.72
CAPN3P20807 AC073335.1-201ENST00000427776 363 ntBASIC4.29□□□□□ -1.72
CAPN3P20807 RPL23AP1-201ENST00000428990 471 ntBASIC4.29□□□□□ -1.72
CAPN3P20807 BMS1P19-201ENST00000433925 393 ntBASIC4.29□□□□□ -1.72
CAPN3P20807 VDAC1P3-201ENST00000434069 851 ntBASIC4.29□□□□□ -1.72
CAPN3P20807 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.29□□□□□ -1.72
CAPN3P20807 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CAPN3P20807 HLA-N-201ENST00000437516 135 ntBASIC4.29□□□□□ -1.72
CAPN3P20807 AC005154.2-201ENST00000438110 379 ntBASIC4.29□□□□□ -1.72
CAPN3P20807 Z95327.1-201ENST00000446082 482 ntBASIC4.29□□□□□ -1.72
CAPN3P20807 ARL2BPP10-201ENST00000446487 531 ntBASIC4.29□□□□□ -1.72
CAPN3P20807 DDX39BP2-208ENST00000453923 258 ntBASIC4.29□□□□□ -1.72
CAPN3P20807 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.29□□□□□ -1.72
CAPN3P20807 AC010618.1-201ENST00000469924 477 ntBASIC4.29□□□□□ -1.72
CAPN3P20807 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.29□□□□□ -1.72
CAPN3P20807 RPL7P38-201ENST00000488396 739 ntBASIC4.29□□□□□ -1.72
CAPN3P20807 AC090453.1-201ENST00000495560 436 ntBASIC4.29□□□□□ -1.72
CAPN3P20807 AC104986.1-201ENST00000517978 436 ntBASIC4.29□□□□□ -1.72
CAPN3P20807 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.29□□□□□ -1.72
CAPN3P20807 MTND2P32-201ENST00000521584 1038 ntBASIC4.29□□□□□ -1.72
CAPN3P20807 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.29□□□□□ -1.72
CAPN3P20807 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.29□□□□□ -1.72
CAPN3P20807 AC069240.1-201ENST00000548774 375 ntBASIC4.29□□□□□ -1.72
CAPN3P20807 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.29□□□□□ -1.72
CAPN3P20807 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.29□□□□□ -1.72
CAPN3P20807 AC079171.1-201ENST00000568788 914 ntBASIC4.29□□□□□ -1.72
CAPN3P20807 RPL23AP97-201ENST00000568955 471 ntBASIC4.29□□□□□ -1.72
CAPN3P20807 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.29□□□□□ -1.72
CAPN3P20807 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.29□□□□□ -1.72
CAPN3P20807 MIR92B-201ENST00000607575 96 ntBASIC4.29□□□□□ -1.72
CAPN3P20807 AC018755.4-201ENST00000619715 454 ntBASIC4.29□□□□□ -1.72
CAPN3P20807 AC007546.2-201ENST00000623996 360 ntBASIC4.29□□□□□ -1.72
CAPN3P20807 AP001002.2-201ENST00000625137 386 ntBASIC4.29□□□□□ -1.72
CAPN3P20807 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CAPN3P20807 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CAPN3P20807 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CAPN3P20807 CPHL1P-201ENST00000461341 3407 ntBASIC4.29□□□□□ -1.72
CAPN3P20807 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.29□□□□□ -1.72
CAPN3P20807 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CAPN3P20807 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CAPN3P20807 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CAPN3P20807 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CAPN3P20807 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CAPN3P20807 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
CAPN3P20807 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CAPN3P20807 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CAPN3P20807 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CAPN3P20807 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CAPN3P20807 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CAPN3P20807 OR5BR1P-201ENST00000524992 1330 ntBASIC4.28□□□□□ -1.72
CAPN3P20807 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CAPN3P20807 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.28□□□□□ -1.72
CAPN3P20807 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CAPN3P20807 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms