Protein–RNA interactions for Protein: P18827

SDC1, Syndecan-1, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1P18827 RN7SKP234-201ENST00000517173 224 ntBASIC3.46□□□□□ -1.86
SDC1P18827 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.46□□□□□ -1.86
SDC1P18827 AP006245.1-201ENST00000522549 120 ntBASIC3.46□□□□□ -1.86
SDC1P18827 AC007991.1-201ENST00000522680 631 ntBASIC3.46□□□□□ -1.86
SDC1P18827 AC104417.1-201ENST00000523974 751 ntBASIC3.46□□□□□ -1.86
SDC1P18827 AC118942.1-201ENST00000529674 1035 ntBASIC3.46□□□□□ -1.86
SDC1P18827 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.46□□□□□ -1.86
SDC1P18827 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.46□□□□□ -1.86
SDC1P18827 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SDC1P18827 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SDC1P18827 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.46□□□□□ -1.86
SDC1P18827 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.46□□□□□ -1.86
SDC1P18827 AL606834.3-201ENST00000602615 496 ntBASIC3.46□□□□□ -1.86
SDC1P18827 AL158050.2-201ENST00000605336 568 ntBASIC3.46□□□□□ -1.86
SDC1P18827 AL139022.2-201ENST00000606934 443 ntBASIC3.46□□□□□ -1.86
SDC1P18827 FAM157B-203ENST00000639350 358 ntBASIC3.46□□□□□ -1.86
SDC1P18827 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SDC1P18827 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.46□□□□□ -1.86
SDC1P18827 DCAF13P3-201ENST00000561147 1334 ntBASIC3.45□□□□□ -1.86
SDC1P18827 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.45□□□□□ -1.86
SDC1P18827 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.45□□□□□ -1.86
SDC1P18827 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SDC1P18827 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SDC1P18827 AC007685.1-201ENST00000329806 452 ntBASIC3.45□□□□□ -1.86
SDC1P18827 RNA5SP235-201ENST00000365411 114 ntBASIC3.45□□□□□ -1.86
SDC1P18827 RNU6-444P-201ENST00000383988 108 ntBASIC3.45□□□□□ -1.86
SDC1P18827 AL136116.1-201ENST00000403591 381 ntBASIC3.45□□□□□ -1.86
SDC1P18827 GSTA8P-201ENST00000404253 637 ntBASIC3.45□□□□□ -1.86
SDC1P18827 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.45□□□□□ -1.86
SDC1P18827 RPS7P9-201ENST00000414704 586 ntBASIC3.45□□□□□ -1.86
SDC1P18827 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.45□□□□□ -1.86
SDC1P18827 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.45□□□□□ -1.86
SDC1P18827 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.45□□□□□ -1.86
SDC1P18827 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.45□□□□□ -1.86
SDC1P18827 SDCBPP2-201ENST00000424643 885 ntBASIC3.45□□□□□ -1.86
SDC1P18827 C1DP1-201ENST00000426049 402 ntBASIC3.45□□□□□ -1.86
SDC1P18827 RPP40P1-201ENST00000426762 456 ntBASIC3.45□□□□□ -1.86
SDC1P18827 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.45□□□□□ -1.86
SDC1P18827 UBE2V1P1-201ENST00000430836 445 ntBASIC3.45□□□□□ -1.86
SDC1P18827 PTGES3P1-201ENST00000439531 483 ntBASIC3.45□□□□□ -1.86
SDC1P18827 ZNF736P11Y-201ENST00000442535 1213 ntBASIC3.45□□□□□ -1.86
SDC1P18827 ZNF736P12Y-201ENST00000443152 1243 ntBASIC3.45□□□□□ -1.86
SDC1P18827 BX276092.4-201ENST00000452056 248 ntBASIC3.45□□□□□ -1.86
SDC1P18827 ANP32BP2-201ENST00000454525 545 ntBASIC3.45□□□□□ -1.86
SDC1P18827 ZNF736P4Y-201ENST00000454995 1243 ntBASIC3.45□□□□□ -1.86
SDC1P18827 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.45□□□□□ -1.86
SDC1P18827 AP000893.1-201ENST00000474462 794 ntBASIC3.45□□□□□ -1.86
SDC1P18827 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.45□□□□□ -1.86
SDC1P18827 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.45□□□□□ -1.86
SDC1P18827 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SDC1P18827 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SDC1P18827 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.45□□□□□ -1.86
SDC1P18827 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SDC1P18827 AC026784.1-201ENST00000507986 352 ntBASIC3.45□□□□□ -1.86
SDC1P18827 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.45□□□□□ -1.86
SDC1P18827 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SDC1P18827 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.45□□□□□ -1.86
SDC1P18827 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.45□□□□□ -1.86
SDC1P18827 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.45□□□□□ -1.86
SDC1P18827 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.45□□□□□ -1.86
SDC1P18827 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.45□□□□□ -1.86
SDC1P18827 OR8R1P-201ENST00000543943 764 ntBASIC3.45□□□□□ -1.86
SDC1P18827 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.45□□□□□ -1.86
SDC1P18827 MTCYBP28-201ENST00000566728 1132 ntBASIC3.45□□□□□ -1.86
SDC1P18827 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.45□□□□□ -1.86
SDC1P18827 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.45□□□□□ -1.86
SDC1P18827 MIR4504-201ENST00000577413 92 ntBASIC3.45□□□□□ -1.86
SDC1P18827 MIR4666A-201ENST00000580160 79 ntBASIC3.45□□□□□ -1.86
SDC1P18827 MIR4286-201ENST00000580651 93 ntBASIC3.45□□□□□ -1.86
SDC1P18827 AP001542.2-201ENST00000593141 364 ntBASIC3.45□□□□□ -1.86
SDC1P18827 AL022067.1-201ENST00000602426 454 ntBASIC3.45□□□□□ -1.86
SDC1P18827 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.45□□□□□ -1.86
SDC1P18827 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.45□□□□□ -1.86
SDC1P18827 AP005137.2-201ENST00000609238 400 ntBASIC3.45□□□□□ -1.86
SDC1P18827 AC105227.2-201ENST00000615075 605 ntBASIC3.45□□□□□ -1.86
SDC1P18827 AC022306.3-201ENST00000619930 550 ntBASIC3.45□□□□□ -1.86
SDC1P18827 AC084824.4-201ENST00000620106 731 ntBASIC3.45□□□□□ -1.86
SDC1P18827 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.45□□□□□ -1.86
SDC1P18827 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.45□□□□□ -1.86
SDC1P18827 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.45□□□□□ -1.86
SDC1P18827 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.45□□□□□ -1.86
SDC1P18827 MTCO1P14-201ENST00000441695 1559 ntBASIC3.45□□□□□ -1.86
SDC1P18827 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
SDC1P18827 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SDC1P18827 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.45□□□□□ -1.86
SDC1P18827 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SDC1P18827 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SDC1P18827 AC025125.1-201ENST00000624743 1922 ntBASIC3.44□□□□□ -1.86
SDC1P18827 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SDC1P18827 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.44□□□□□ -1.86
SDC1P18827 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.44□□□□□ -1.86
SDC1P18827 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SDC1P18827 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
SDC1P18827 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SDC1P18827 OR4A15-201ENST00000314706 1035 ntBASIC3.44□□□□□ -1.86
SDC1P18827 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
SDC1P18827 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
SDC1P18827 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.44□□□□□ -1.86
SDC1P18827 U3.39-201ENST00000408569 239 ntBASIC3.44□□□□□ -1.86
SDC1P18827 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms