Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LDLRP01130 SDHCP2-201ENST00000398565 501 ntBASIC4.11□□□□□ -1.75
LDLRP01130 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
LDLRP01130 ERHP2-201ENST00000402323 299 ntBASIC4.11□□□□□ -1.75
LDLRP01130 RNA5SP239-201ENST00000410218 129 ntBASIC4.11□□□□□ -1.75
LDLRP01130 RN7SKP202-201ENST00000410439 330 ntBASIC4.11□□□□□ -1.75
LDLRP01130 RNU6-628P-201ENST00000410675 107 ntBASIC4.11□□□□□ -1.75
LDLRP01130 NRBF2P2-201ENST00000413087 861 ntBASIC4.11□□□□□ -1.75
LDLRP01130 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.11□□□□□ -1.75
LDLRP01130 AC009237.5-201ENST00000414271 501 ntBASIC4.11□□□□□ -1.75
LDLRP01130 MTND2P18-201ENST00000419962 1030 ntBASIC4.11□□□□□ -1.75
LDLRP01130 AC092647.1-201ENST00000420654 287 ntBASIC4.11□□□□□ -1.75
LDLRP01130 RBMY1KP-201ENST00000423480 476 ntBASIC4.11□□□□□ -1.75
LDLRP01130 RPL30P3-201ENST00000424262 333 ntBASIC4.11□□□□□ -1.75
LDLRP01130 DPRXP1-201ENST00000426312 460 ntBASIC4.11□□□□□ -1.75
LDLRP01130 FTH1P6-201ENST00000430768 320 ntBASIC4.11□□□□□ -1.75
LDLRP01130 AL132765.1-201ENST00000434165 553 ntBASIC4.11□□□□□ -1.75
LDLRP01130 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.11□□□□□ -1.75
LDLRP01130 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.11□□□□□ -1.75
LDLRP01130 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4.11□□□□□ -1.75
LDLRP01130 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.11□□□□□ -1.75
LDLRP01130 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.11□□□□□ -1.75
LDLRP01130 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.11□□□□□ -1.75
LDLRP01130 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.11□□□□□ -1.75
LDLRP01130 AC007327.1-201ENST00000447461 264 ntBASIC4.11□□□□□ -1.75
LDLRP01130 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.11□□□□□ -1.75
LDLRP01130 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.11□□□□□ -1.75
LDLRP01130 MTND1P27-201ENST00000451117 902 ntBASIC4.11□□□□□ -1.75
LDLRP01130 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.11□□□□□ -1.75
LDLRP01130 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.11□□□□□ -1.75
LDLRP01130 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LDLRP01130 RN7SL542P-201ENST00000467147 294 ntBASIC4.11□□□□□ -1.75
LDLRP01130 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.11□□□□□ -1.75
LDLRP01130 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LDLRP01130 LAMTOR3P2-201ENST00000504479 232 ntBASIC4.11□□□□□ -1.75
LDLRP01130 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.11□□□□□ -1.75
LDLRP01130 RNU6-885P-201ENST00000516607 104 ntBASIC4.11□□□□□ -1.75
LDLRP01130 RN7SKP96-201ENST00000516948 297 ntBASIC4.11□□□□□ -1.75
LDLRP01130 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.11□□□□□ -1.75
LDLRP01130 AC087373.1-201ENST00000524920 491 ntBASIC4.11□□□□□ -1.75
LDLRP01130 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.11□□□□□ -1.75
LDLRP01130 AP000827.1-201ENST00000527814 258 ntBASIC4.11□□□□□ -1.75
LDLRP01130 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.11□□□□□ -1.75
LDLRP01130 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.11□□□□□ -1.75
LDLRP01130 AC009094.1-201ENST00000564443 426 ntBASIC4.11□□□□□ -1.75
LDLRP01130 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.11□□□□□ -1.75
LDLRP01130 AC011939.3-201ENST00000613686 466 ntBASIC4.11□□□□□ -1.75
LDLRP01130 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.11□□□□□ -1.75
LDLRP01130 RMST_9.1-201ENST00000619945 193 ntBASIC4.11□□□□□ -1.75
LDLRP01130 MIR6075-201ENST00000620782 95 ntBASIC4.11□□□□□ -1.75
LDLRP01130 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.11□□□□□ -1.75
LDLRP01130 AC124312.6-202ENST00000623624 418 ntBASIC4.11□□□□□ -1.75
LDLRP01130 AC017037.3-201ENST00000625016 472 ntBASIC4.11□□□□□ -1.75
LDLRP01130 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.11□□□□□ -1.75
LDLRP01130 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LDLRP01130 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.11□□□□□ -1.75
LDLRP01130 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.11□□□□□ -1.75
LDLRP01130 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.11□□□□□ -1.75
LDLRP01130 AC125257.1-201ENST00000560400 2930 ntBASIC4.11□□□□□ -1.75
LDLRP01130 Z99496.1-201ENST00000469424 1477 ntBASIC4.11□□□□□ -1.75
LDLRP01130 AC018555.1-201ENST00000567548 1980 ntBASIC4.11□□□□□ -1.75
LDLRP01130 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
LDLRP01130 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
LDLRP01130 SPRR2C-201ENST00000290702 219 ntBASIC4.1□□□□□ -1.75
LDLRP01130 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.1□□□□□ -1.75
LDLRP01130 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
LDLRP01130 MIR554-201ENST00000384874 96 ntBASIC4.1□□□□□ -1.75
LDLRP01130 SNORD65.1-201ENST00000390889 71 ntBASIC4.1□□□□□ -1.75
LDLRP01130 AL590084.1-201ENST00000407885 387 ntBASIC4.1□□□□□ -1.75
LDLRP01130 MIR1302-8-201ENST00000408342 128 ntBASIC4.1□□□□□ -1.75
LDLRP01130 RPS20P14-201ENST00000412545 360 ntBASIC4.1□□□□□ -1.75
LDLRP01130 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.1□□□□□ -1.75
LDLRP01130 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.1□□□□□ -1.75
LDLRP01130 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
LDLRP01130 USP9YP11-201ENST00000427537 717 ntBASIC4.1□□□□□ -1.75
LDLRP01130 MTCO3P5-201ENST00000433620 714 ntBASIC4.1□□□□□ -1.75
LDLRP01130 GTF2IP7-202ENST00000436677 309 ntBASIC4.1□□□□□ -1.75
LDLRP01130 YWHAZP8-201ENST00000436935 731 ntBASIC4.1□□□□□ -1.75
LDLRP01130 RPL23AP93-201ENST00000440847 484 ntBASIC4.1□□□□□ -1.75
LDLRP01130 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.1□□□□□ -1.75
LDLRP01130 AL121877.1-201ENST00000453704 622 ntBASIC4.1□□□□□ -1.75
LDLRP01130 RN7SL98P-201ENST00000462271 300 ntBASIC4.1□□□□□ -1.75
LDLRP01130 RPL23AP2-201ENST00000471227 466 ntBASIC4.1□□□□□ -1.75
LDLRP01130 AP000926.1-201ENST00000479573 241 ntBASIC4.1□□□□□ -1.75
LDLRP01130 BET1P1-201ENST00000482276 359 ntBASIC4.1□□□□□ -1.75
LDLRP01130 AC126121.1-201ENST00000482313 553 ntBASIC4.1□□□□□ -1.75
LDLRP01130 FTH1P24-201ENST00000503502 462 ntBASIC4.1□□□□□ -1.75
LDLRP01130 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.1□□□□□ -1.75
LDLRP01130 AC025554.1-201ENST00000505641 188 ntBASIC4.1□□□□□ -1.75
LDLRP01130 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.1□□□□□ -1.75
LDLRP01130 AC018797.3-201ENST00000513388 1241 ntBASIC4.1□□□□□ -1.75
LDLRP01130 AP001207.1-201ENST00000524051 481 ntBASIC4.1□□□□□ -1.75
LDLRP01130 AP001317.1-201ENST00000531194 960 ntBASIC4.1□□□□□ -1.75
LDLRP01130 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.1□□□□□ -1.75
LDLRP01130 AL161713.1-201ENST00000555538 145 ntBASIC4.1□□□□□ -1.75
LDLRP01130 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
LDLRP01130 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.1□□□□□ -1.75
LDLRP01130 AC068790.5-201ENST00000602741 355 ntBASIC4.1□□□□□ -1.75
LDLRP01130 AC025588.2-201ENST00000604851 466 ntBASIC4.1□□□□□ -1.75
LDLRP01130 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms