Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
PROM1O43490 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.66□□□□□ -1.66
PROM1O43490 RPL7P24-201ENST00000493052 752 ntBASIC4.66□□□□□ -1.66
PROM1O43490 MRPS33P2-201ENST00000507850 322 ntBASIC4.66□□□□□ -1.66
PROM1O43490 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.66□□□□□ -1.66
PROM1O43490 RNU6-202P-201ENST00000515998 96 ntBASIC4.66□□□□□ -1.66
PROM1O43490 Y_RNA.719-201ENST00000517156 106 ntBASIC4.66□□□□□ -1.66
PROM1O43490 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.66□□□□□ -1.66
PROM1O43490 AP002748.2-201ENST00000528671 348 ntBASIC4.66□□□□□ -1.66
PROM1O43490 OR5AN2P-201ENST00000534535 896 ntBASIC4.66□□□□□ -1.66
PROM1O43490 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.66□□□□□ -1.66
PROM1O43490 ZNF519P2-201ENST00000557032 169 ntBASIC4.66□□□□□ -1.66
PROM1O43490 HMGB3P26-201ENST00000560051 582 ntBASIC4.66□□□□□ -1.66
PROM1O43490 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.66□□□□□ -1.66
PROM1O43490 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.66□□□□□ -1.66
PROM1O43490 AC136618.2-201ENST00000575091 400 ntBASIC4.66□□□□□ -1.66
PROM1O43490 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.66□□□□□ -1.66
PROM1O43490 AC007390.2-201ENST00000606229 3803 ntBASIC4.66□□□□□ -1.66
PROM1O43490 AP001521.2-201ENST00000608772 546 ntBASIC4.66□□□□□ -1.66
PROM1O43490 AC090517.2-201ENST00000614966 680 ntBASIC4.66□□□□□ -1.66
PROM1O43490 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.66□□□□□ -1.66
PROM1O43490 AC019206.1-201ENST00000621938 425 ntBASIC4.66□□□□□ -1.66
PROM1O43490 AP006248.2-201ENST00000623309 592 ntBASIC4.66□□□□□ -1.66
PROM1O43490 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PROM1O43490 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.66□□□□□ -1.66
PROM1O43490 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
PROM1O43490 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PROM1O43490 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
PROM1O43490 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PROM1O43490 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PROM1O43490 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
PROM1O43490 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
PROM1O43490 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.65□□□□□ -1.66
PROM1O43490 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.66
PROM1O43490 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.65□□□□□ -1.66
PROM1O43490 AC134882.1-201ENST00000603738 1676 ntBASIC4.65□□□□□ -1.66
PROM1O43490 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
PROM1O43490 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
PROM1O43490 RNU6-462P-201ENST00000362659 105 ntBASIC4.65□□□□□ -1.67
PROM1O43490 RNU5E-5P-201ENST00000365379 116 ntBASIC4.65□□□□□ -1.67
PROM1O43490 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.65□□□□□ -1.67
PROM1O43490 Y_RNA.582-201ENST00000391023 95 ntBASIC4.65□□□□□ -1.67
PROM1O43490 HMGB3P23-201ENST00000414981 585 ntBASIC4.65□□□□□ -1.67
PROM1O43490 USP9YP13-201ENST00000417797 480 ntBASIC4.65□□□□□ -1.67
PROM1O43490 AIMP1P1-201ENST00000418670 937 ntBASIC4.65□□□□□ -1.67
PROM1O43490 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.65□□□□□ -1.67
PROM1O43490 IPMKP1-201ENST00000425988 855 ntBASIC4.65□□□□□ -1.67
PROM1O43490 MTND1P2-201ENST00000430604 821 ntBASIC4.65□□□□□ -1.67
PROM1O43490 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.65□□□□□ -1.67
PROM1O43490 RPL7P11-201ENST00000437586 658 ntBASIC4.65□□□□□ -1.67
PROM1O43490 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.65□□□□□ -1.67
PROM1O43490 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.65□□□□□ -1.67
PROM1O43490 VN1R10P-201ENST00000447106 875 ntBASIC4.65□□□□□ -1.67
PROM1O43490 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.65□□□□□ -1.67
PROM1O43490 PAXBP1P1-201ENST00000449315 447 ntBASIC4.65□□□□□ -1.67
PROM1O43490 RPL37P3-201ENST00000456825 293 ntBASIC4.65□□□□□ -1.67
PROM1O43490 AL672167.3-201ENST00000465951 960 ntBASIC4.65□□□□□ -1.67
PROM1O43490 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
PROM1O43490 AC004924.1-201ENST00000480160 781 ntBASIC4.65□□□□□ -1.67
PROM1O43490 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.65□□□□□ -1.67
PROM1O43490 RNA5SP216-201ENST00000516111 123 ntBASIC4.65□□□□□ -1.67
PROM1O43490 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.65□□□□□ -1.67
PROM1O43490 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.65□□□□□ -1.67
PROM1O43490 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.65□□□□□ -1.67
PROM1O43490 AC005868.1-201ENST00000536421 331 ntBASIC4.65□□□□□ -1.67
PROM1O43490 AC091489.2-201ENST00000566263 604 ntBASIC4.65□□□□□ -1.67
PROM1O43490 RN7SL52P-201ENST00000584271 284 ntBASIC4.65□□□□□ -1.67
PROM1O43490 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.65□□□□□ -1.67
PROM1O43490 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.65□□□□□ -1.67
PROM1O43490 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.65□□□□□ -1.67
PROM1O43490 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.65□□□□□ -1.67
PROM1O43490 AC011451.2-201ENST00000604303 598 ntBASIC4.65□□□□□ -1.67
PROM1O43490 AL359535.1-201ENST00000612100 1087 ntBASIC4.65□□□□□ -1.67
PROM1O43490 RN7SL722P-201ENST00000617780 284 ntBASIC4.65□□□□□ -1.67
PROM1O43490 RN7SL565P-201ENST00000618246 284 ntBASIC4.65□□□□□ -1.67
PROM1O43490 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC4.65□□□□□ -1.67
PROM1O43490 AC091905.4-201ENST00000623432 202 ntBASIC4.65□□□□□ -1.67
PROM1O43490 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.65□□□□□ -1.67
PROM1O43490 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.65□□□□□ -1.67
PROM1O43490 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
PROM1O43490 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PROM1O43490 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PROM1O43490 MAPK10-263ENST00000641052 4307 ntBASIC4.65□□□□□ -1.67
PROM1O43490 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PROM1O43490 ELF2P3-201ENST00000445099 1506 ntBASIC4.65□□□□□ -1.67
PROM1O43490 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.65□□□□□ -1.67
PROM1O43490 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.65□□□□□ -1.67
PROM1O43490 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PROM1O43490 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.65□□□□□ -1.67
PROM1O43490 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
PROM1O43490 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
PROM1O43490 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PROM1O43490 MAPK10-320ENST00000641462 6696 ntBASIC4.65□□□□□ -1.67
PROM1O43490 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PROM1O43490 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PROM1O43490 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PROM1O43490 AC025125.1-201ENST00000624743 1922 ntBASIC4.64□□□□□ -1.67
PROM1O43490 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
PROM1O43490 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PROM1O43490 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms