Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HOXA3O43365 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXA3O43365 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.47□□□□□ -1.69
HOXA3O43365 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXA3O43365 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.47□□□□□ -1.69
HOXA3O43365 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXA3O43365 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
HOXA3O43365 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXA3O43365 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.47□□□□□ -1.69
HOXA3O43365 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.47□□□□□ -1.69
HOXA3O43365 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXA3O43365 SNORD82-201ENST00000365530 70 ntBASIC4.47□□□□□ -1.69
HOXA3O43365 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HOXA3O43365 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
HOXA3O43365 RPL7P60-201ENST00000397636 735 ntBASIC4.47□□□□□ -1.69
HOXA3O43365 MIR937-201ENST00000401271 86 ntBASIC4.47□□□□□ -1.69
HOXA3O43365 RNU6-373P-201ENST00000411247 98 ntBASIC4.47□□□□□ -1.69
HOXA3O43365 RPS20P15-201ENST00000412792 311 ntBASIC4.47□□□□□ -1.69
HOXA3O43365 RPL12P9-201ENST00000412942 488 ntBASIC4.47□□□□□ -1.69
HOXA3O43365 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXA3O43365 SNRPFP1-201ENST00000414761 252 ntBASIC4.47□□□□□ -1.69
HOXA3O43365 AC007390.1-201ENST00000415722 356 ntBASIC4.47□□□□□ -1.69
HOXA3O43365 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.47□□□□□ -1.69
HOXA3O43365 RBMY2QP-201ENST00000429799 1147 ntBASIC4.47□□□□□ -1.69
HOXA3O43365 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXA3O43365 RPS27P18-201ENST00000431701 247 ntBASIC4.47□□□□□ -1.69
HOXA3O43365 OR6D1P-201ENST00000436165 939 ntBASIC4.47□□□□□ -1.69
HOXA3O43365 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXA3O43365 AC108734.1-201ENST00000439549 399 ntBASIC4.47□□□□□ -1.69
HOXA3O43365 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXA3O43365 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.47□□□□□ -1.69
HOXA3O43365 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXA3O43365 AC005532.2-201ENST00000467154 373 ntBASIC4.47□□□□□ -1.69
HOXA3O43365 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
HOXA3O43365 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC4.47□□□□□ -1.69
HOXA3O43365 RN7SL727P-201ENST00000482164 296 ntBASIC4.47□□□□□ -1.69
HOXA3O43365 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.47□□□□□ -1.69
HOXA3O43365 TOMM22P4-201ENST00000511318 336 ntBASIC4.47□□□□□ -1.69
HOXA3O43365 SNORA70.11-201ENST00000515987 138 ntBASIC4.47□□□□□ -1.69
HOXA3O43365 SNORA70.13-201ENST00000516116 138 ntBASIC4.47□□□□□ -1.69
HOXA3O43365 RNU6-1153P-201ENST00000516760 105 ntBASIC4.47□□□□□ -1.69
HOXA3O43365 IGLV3-24-201ENST00000517477 197 ntBASIC4.47□□□□□ -1.69
HOXA3O43365 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.47□□□□□ -1.69
HOXA3O43365 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXA3O43365 OR4R1P-201ENST00000529879 463 ntBASIC4.47□□□□□ -1.69
HOXA3O43365 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXA3O43365 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.47□□□□□ -1.69
HOXA3O43365 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.47□□□□□ -1.69
HOXA3O43365 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXA3O43365 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXA3O43365 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.47□□□□□ -1.69
HOXA3O43365 AC060771.1-201ENST00000582031 164 ntBASIC4.47□□□□□ -1.69
HOXA3O43365 MIR4795-201ENST00000584182 89 ntBASIC4.47□□□□□ -1.69
HOXA3O43365 UBE2L4-201ENST00000587688 464 ntBASIC4.47□□□□□ -1.69
HOXA3O43365 AC098848.2-201ENST00000588023 330 ntBASIC4.47□□□□□ -1.69
HOXA3O43365 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXA3O43365 AC013553.2-201ENST00000604244 589 ntBASIC4.47□□□□□ -1.69
HOXA3O43365 AC000068.2-201ENST00000608816 460 ntBASIC4.47□□□□□ -1.69
HOXA3O43365 AC064836.2-201ENST00000609491 462 ntBASIC4.47□□□□□ -1.69
HOXA3O43365 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HOXA3O43365 AL121612.2-201ENST00000612261 482 ntBASIC4.47□□□□□ -1.69
HOXA3O43365 AC025574.2-201ENST00000615621 514 ntBASIC4.47□□□□□ -1.69
HOXA3O43365 AL158801.5-201ENST00000623123 465 ntBASIC4.47□□□□□ -1.69
HOXA3O43365 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.47□□□□□ -1.69
HOXA3O43365 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HOXA3O43365 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HOXA3O43365 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HOXA3O43365 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXA3O43365 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
HOXA3O43365 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.47□□□□□ -1.69
HOXA3O43365 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXA3O43365 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.47□□□□□ -1.69
HOXA3O43365 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
HOXA3O43365 AC011978.2-201ENST00000569835 2054 ntBASIC4.47□□□□□ -1.69
HOXA3O43365 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
HOXA3O43365 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HOXA3O43365 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.47□□□□□ -1.69
HOXA3O43365 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC4.47□□□□□ -1.69
HOXA3O43365 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.47□□□□□ -1.69
HOXA3O43365 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HOXA3O43365 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
HOXA3O43365 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXA3O43365 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.47□□□□□ -1.69
HOXA3O43365 AL122126.1-201ENST00000546905 1318 ntBASIC4.46□□□□□ -1.69
HOXA3O43365 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
HOXA3O43365 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.69
HOXA3O43365 AC009229.4-201ENST00000623854 1947 ntBASIC4.46□□□□□ -1.69
HOXA3O43365 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC4.46□□□□□ -1.69
HOXA3O43365 LINC01963-201ENST00000562038 3148 ntBASIC4.46□□□□□ -1.69
HOXA3O43365 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
HOXA3O43365 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.46□□□□□ -1.69
HOXA3O43365 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
HOXA3O43365 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.69
HOXA3O43365 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HOXA3O43365 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXA3O43365 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXA3O43365 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HOXA3O43365 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXA3O43365 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HOXA3O43365 AL022322.2-201ENST00000624072 20397 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms