Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.48□□□□□ -1.69
PCDH17O14917 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.48□□□□□ -1.69
PCDH17O14917 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.48□□□□□ -1.69
PCDH17O14917 AC090453.1-201ENST00000495560 436 ntBASIC4.48□□□□□ -1.69
PCDH17O14917 AC006499.5-201ENST00000505037 514 ntBASIC4.48□□□□□ -1.69
PCDH17O14917 AC093809.1-201ENST00000509155 340 ntBASIC4.48□□□□□ -1.69
PCDH17O14917 RNA5SP392-201ENST00000516905 112 ntBASIC4.48□□□□□ -1.69
PCDH17O14917 IGLVIV-53-201ENST00000520107 367 ntBASIC4.48□□□□□ -1.69
PCDH17O14917 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.48□□□□□ -1.69
PCDH17O14917 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.48□□□□□ -1.69
PCDH17O14917 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PCDH17O14917 AL049839.1-201ENST00000556151 657 ntBASIC4.48□□□□□ -1.69
PCDH17O14917 PCMTD1P2-201ENST00000565017 355 ntBASIC4.48□□□□□ -1.69
PCDH17O14917 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.48□□□□□ -1.69
PCDH17O14917 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PCDH17O14917 AL009028.1-201ENST00000604895 802 ntBASIC4.48□□□□□ -1.69
PCDH17O14917 AC012360.2-201ENST00000609349 391 ntBASIC4.48□□□□□ -1.69
PCDH17O14917 AL158063.1-201ENST00000615349 536 ntBASIC4.48□□□□□ -1.69
PCDH17O14917 AL356266.1-201ENST00000623311 483 ntBASIC4.48□□□□□ -1.69
PCDH17O14917 AL356596.1-201ENST00000624230 379 ntBASIC4.48□□□□□ -1.69
PCDH17O14917 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.48□□□□□ -1.69
PCDH17O14917 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.48□□□□□ -1.69
PCDH17O14917 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDH17O14917 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PCDH17O14917 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDH17O14917 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDH17O14917 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDH17O14917 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDH17O14917 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDH17O14917 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
PCDH17O14917 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
PCDH17O14917 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
PCDH17O14917 ZNF734P-201ENST00000419494 1534 ntBASIC4.47□□□□□ -1.69
PCDH17O14917 CR383658.2-201ENST00000547576 1525 ntBASIC4.47□□□□□ -1.69
PCDH17O14917 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.47□□□□□ -1.69
PCDH17O14917 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.47□□□□□ -1.69
PCDH17O14917 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.47□□□□□ -1.69
PCDH17O14917 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PCDH17O14917 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PCDH17O14917 SNORD96B-201ENST00000386148 79 ntBASIC4.47□□□□□ -1.69
PCDH17O14917 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
PCDH17O14917 SNORA26.8-201ENST00000391306 124 ntBASIC4.47□□□□□ -1.69
PCDH17O14917 AL121834.1-202ENST00000404494 277 ntBASIC4.47□□□□□ -1.69
PCDH17O14917 VN1R8P-201ENST00000407739 893 ntBASIC4.47□□□□□ -1.69
PCDH17O14917 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PCDH17O14917 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PCDH17O14917 TPMTP3-201ENST00000411928 735 ntBASIC4.47□□□□□ -1.69
PCDH17O14917 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.47□□□□□ -1.69
PCDH17O14917 AC069213.2-201ENST00000420238 366 ntBASIC4.47□□□□□ -1.69
PCDH17O14917 RPL7P30-201ENST00000420888 709 ntBASIC4.47□□□□□ -1.69
PCDH17O14917 RPL18P10-201ENST00000425606 538 ntBASIC4.47□□□□□ -1.69
PCDH17O14917 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.47□□□□□ -1.69
PCDH17O14917 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC4.47□□□□□ -1.69
PCDH17O14917 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.47□□□□□ -1.69
PCDH17O14917 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.47□□□□□ -1.69
PCDH17O14917 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.47□□□□□ -1.69
PCDH17O14917 ZNF114P1-201ENST00000453500 292 ntBASIC4.47□□□□□ -1.69
PCDH17O14917 PLGLA-201ENST00000465668 449 ntBASIC4.47□□□□□ -1.69
PCDH17O14917 AL136126.1-201ENST00000473603 402 ntBASIC4.47□□□□□ -1.69
PCDH17O14917 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PCDH17O14917 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.47□□□□□ -1.69
PCDH17O14917 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.47□□□□□ -1.69
PCDH17O14917 AC109458.1-201ENST00000508858 316 ntBASIC4.47□□□□□ -1.69
PCDH17O14917 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.47□□□□□ -1.69
PCDH17O14917 MTND5P4-201ENST00000514978 288 ntBASIC4.47□□□□□ -1.69
PCDH17O14917 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.47□□□□□ -1.69
PCDH17O14917 AC134698.5-201ENST00000519444 336 ntBASIC4.47□□□□□ -1.69
PCDH17O14917 HIGD1AP10-201ENST00000527837 282 ntBASIC4.47□□□□□ -1.69
PCDH17O14917 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.47□□□□□ -1.69
PCDH17O14917 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PCDH17O14917 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.47□□□□□ -1.69
PCDH17O14917 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.47□□□□□ -1.69
PCDH17O14917 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.47□□□□□ -1.69
PCDH17O14917 AC011260.1-201ENST00000578420 472 ntBASIC4.47□□□□□ -1.69
PCDH17O14917 RN7SL176P-201ENST00000580352 264 ntBASIC4.47□□□□□ -1.69
PCDH17O14917 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.47□□□□□ -1.69
PCDH17O14917 AC008507.1-201ENST00000587506 734 ntBASIC4.47□□□□□ -1.69
PCDH17O14917 AC040904.1-201ENST00000590850 223 ntBASIC4.47□□□□□ -1.69
PCDH17O14917 RPL26P30-202ENST00000602923 645 ntBASIC4.47□□□□□ -1.69
PCDH17O14917 AC115286.1-201ENST00000604298 434 ntBASIC4.47□□□□□ -1.69
PCDH17O14917 AL022161.1-201ENST00000604390 213 ntBASIC4.47□□□□□ -1.69
PCDH17O14917 AC011939.3-201ENST00000613686 466 ntBASIC4.47□□□□□ -1.69
PCDH17O14917 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.47□□□□□ -1.69
PCDH17O14917 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.47□□□□□ -1.69
PCDH17O14917 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.47□□□□□ -1.69
PCDH17O14917 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.47□□□□□ -1.69
PCDH17O14917 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.47□□□□□ -1.69
PCDH17O14917 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.47□□□□□ -1.69
PCDH17O14917 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
PCDH17O14917 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.47□□□□□ -1.69
PCDH17O14917 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
PCDH17O14917 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
PCDH17O14917 DHX40P1-201ENST00000588725 1412 ntBASIC4.46□□□□□ -1.69
PCDH17O14917 PABPC1P7-201ENST00000413177 1513 ntBASIC4.46□□□□□ -1.69
PCDH17O14917 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.46□□□□□ -1.69
PCDH17O14917 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
PCDH17O14917 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
PCDH17O14917 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PCDH17O14917 AL442639.1-201ENST00000625030 1899 ntBASIC4.46□□□□□ -1.7
PCDH17O14917 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms