Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC118282.1-201ENST00000506408 765 ntBASIC2.63□□□□□ -1.99
SDCBPO00560 POU5F1P7-201ENST00000508759 541 ntBASIC2.63□□□□□ -1.99
SDCBPO00560 AC119751.1-201ENST00000513357 765 ntBASIC2.63□□□□□ -1.99
SDCBPO00560 MTCO1P30-201ENST00000515244 580 ntBASIC2.63□□□□□ -1.99
SDCBPO00560 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC2.63□□□□□ -1.99
SDCBPO00560 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.63□□□□□ -1.99
SDCBPO00560 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC2.63□□□□□ -1.99
SDCBPO00560 MIR2682-201ENST00000580305 110 ntBASIC2.63□□□□□ -1.99
SDCBPO00560 AC245389.1-201ENST00000605141 529 ntBASIC2.63□□□□□ -1.99
SDCBPO00560 AL354976.1-201ENST00000613843 387 ntBASIC2.63□□□□□ -1.99
SDCBPO00560 AC009464.1-201ENST00000615731 469 ntBASIC2.63□□□□□ -1.99
SDCBPO00560 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SDCBPO00560 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.63□□□□□ -1.99
SDCBPO00560 MAPK10-362ENST00000641864 4484 ntBASIC2.63□□□□□ -1.99
SDCBPO00560 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SDCBPO00560 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
SDCBPO00560 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SDCBPO00560 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SDCBPO00560 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SDCBPO00560 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.62□□□□□ -1.99
SDCBPO00560 RNU6-244P-201ENST00000391028 104 ntBASIC2.62□□□□□ -1.99
SDCBPO00560 ELOCP6-201ENST00000429066 328 ntBASIC2.62□□□□□ -1.99
SDCBPO00560 AL159987.2-201ENST00000432754 307 ntBASIC2.62□□□□□ -1.99
SDCBPO00560 AC108734.1-201ENST00000439549 399 ntBASIC2.62□□□□□ -1.99
SDCBPO00560 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.62□□□□□ -1.99
SDCBPO00560 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
SDCBPO00560 MTCO3P17-201ENST00000443775 513 ntBASIC2.62□□□□□ -1.99
SDCBPO00560 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
SDCBPO00560 ELOCP12-201ENST00000458706 328 ntBASIC2.62□□□□□ -1.99
SDCBPO00560 AC008155.2-201ENST00000464337 397 ntBASIC2.62□□□□□ -1.99
SDCBPO00560 RPL30P11-201ENST00000495304 339 ntBASIC2.62□□□□□ -1.99
SDCBPO00560 AC147055.1-201ENST00000509261 750 ntBASIC2.62□□□□□ -1.99
SDCBPO00560 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.62□□□□□ -1.99
SDCBPO00560 RN7SKP43-201ENST00000516173 320 ntBASIC2.62□□□□□ -1.99
SDCBPO00560 HMGB1P23-201ENST00000518743 568 ntBASIC2.62□□□□□ -1.99
SDCBPO00560 OR4A2P-201ENST00000527276 913 ntBASIC2.62□□□□□ -1.99
SDCBPO00560 MIR4506-201ENST00000584693 77 ntBASIC2.62□□□□□ -1.99
SDCBPO00560 MTCO2P22-201ENST00000603246 681 ntBASIC2.62□□□□□ -1.99
SDCBPO00560 AC117490.2-201ENST00000610042 594 ntBASIC2.62□□□□□ -1.99
SDCBPO00560 AC015967.1-201ENST00000619893 476 ntBASIC2.62□□□□□ -1.99
SDCBPO00560 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SDCBPO00560 AC118273.1-201ENST00000525324 3006 ntBASIC2.62□□□□□ -1.99
SDCBPO00560 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC2.62□□□□□ -1.99
SDCBPO00560 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.62□□□□□ -1.99
SDCBPO00560 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SDCBPO00560 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
SDCBPO00560 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SDCBPO00560 SNORD65-201ENST00000391079 73 ntBASIC2.61□□□□□ -1.99
SDCBPO00560 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.61□□□□□ -1.99
SDCBPO00560 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC2.61□□□□□ -1.99
SDCBPO00560 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.61□□□□□ -1.99
SDCBPO00560 AC097713.2-201ENST00000430199 356 ntBASIC2.61□□□□□ -1.99
SDCBPO00560 RPL37P1-201ENST00000432310 284 ntBASIC2.61□□□□□ -1.99
SDCBPO00560 OR2B8P-201ENST00000432841 938 ntBASIC2.61□□□□□ -1.99
SDCBPO00560 NEK4P1-201ENST00000433383 879 ntBASIC2.61□□□□□ -1.99
SDCBPO00560 AL353898.1-201ENST00000444055 238 ntBASIC2.61□□□□□ -1.99
SDCBPO00560 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC2.61□□□□□ -1.99
SDCBPO00560 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC2.61□□□□□ -1.99
SDCBPO00560 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC2.61□□□□□ -1.99
SDCBPO00560 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.61□□□□□ -1.99
SDCBPO00560 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC2.61□□□□□ -1.99
SDCBPO00560 AC108860.1-201ENST00000484521 383 ntBASIC2.61□□□□□ -1.99
SDCBPO00560 AC108043.1-201ENST00000512696 574 ntBASIC2.61□□□□□ -1.99
SDCBPO00560 RNU2-58P-201ENST00000516403 183 ntBASIC2.61□□□□□ -1.99
SDCBPO00560 HIGD1AP18-201ENST00000520730 278 ntBASIC2.61□□□□□ -1.99
SDCBPO00560 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.61□□□□□ -1.99
SDCBPO00560 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC2.61□□□□□ -1.99
SDCBPO00560 AC008083.2-201ENST00000546707 476 ntBASIC2.61□□□□□ -1.99
SDCBPO00560 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.61□□□□□ -1.99
SDCBPO00560 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC2.61□□□□□ -1.99
SDCBPO00560 ZNF415P1-201ENST00000582279 1166 ntBASIC2.61□□□□□ -1.99
SDCBPO00560 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.61□□□□□ -1.99
SDCBPO00560 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC2.61□□□□□ -1.99
SDCBPO00560 CKS1BP3-201ENST00000600888 237 ntBASIC2.61□□□□□ -1.99
SDCBPO00560 AC008739.3-201ENST00000603262 127 ntBASIC2.61□□□□□ -1.99
SDCBPO00560 ELOCP35-201ENST00000604289 336 ntBASIC2.61□□□□□ -1.99
SDCBPO00560 AC015849.2-201ENST00000605738 409 ntBASIC2.61□□□□□ -1.99
SDCBPO00560 AC055764.2-201ENST00000610089 670 ntBASIC2.61□□□□□ -1.99
SDCBPO00560 AC019176.2-201ENST00000611579 315 ntBASIC2.61□□□□□ -1.99
SDCBPO00560 NF1P10-201ENST00000613227 742 ntBASIC2.61□□□□□ -1.99
SDCBPO00560 MIR4278-201ENST00000636094 69 ntBASIC2.61□□□□□ -1.99
SDCBPO00560 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
SDCBPO00560 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
SDCBPO00560 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
SDCBPO00560 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SDCBPO00560 AL122126.1-201ENST00000546905 1318 ntBASIC2.61□□□□□ -1.99
SDCBPO00560 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SDCBPO00560 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.6□□□□□ -1.99
SDCBPO00560 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
SDCBPO00560 MIR153-1-201ENST00000384914 90 ntBASIC2.6□□□□□ -1.99
SDCBPO00560 U3.19-201ENST00000390893 196 ntBASIC2.6□□□□□ -1.99
SDCBPO00560 HMGB1P10-201ENST00000395823 563 ntBASIC2.6□□□□□ -1.99
SDCBPO00560 HMGB1P13-201ENST00000406019 642 ntBASIC2.6□□□□□ -1.99
SDCBPO00560 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.6□□□□□ -1.99
SDCBPO00560 RNA5SP274-201ENST00000410484 108 ntBASIC2.6□□□□□ -1.99
SDCBPO00560 AC004022.2-201ENST00000413824 193 ntBASIC2.6□□□□□ -1.99
SDCBPO00560 RPL31P45-201ENST00000419532 356 ntBASIC2.6□□□□□ -1.99
SDCBPO00560 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC2.6□□□□□ -1.99
SDCBPO00560 ELOCP11-201ENST00000436690 332 ntBASIC2.6□□□□□ -1.99
SDCBPO00560 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms