Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC1.69□□□□□ -2.14
CHKB-CPT1BH3BT56 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC1.69□□□□□ -2.14
CHKB-CPT1BH3BT56 MYL12BP1-201ENST00000569826 507 ntBASIC1.69□□□□□ -2.14
CHKB-CPT1BH3BT56 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CHKB-CPT1BH3BT56 MIR4270-201ENST00000581799 70 ntBASIC1.69□□□□□ -2.14
CHKB-CPT1BH3BT56 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC1.69□□□□□ -2.14
CHKB-CPT1BH3BT56 SS18L2P2-201ENST00000583960 235 ntBASIC1.69□□□□□ -2.14
CHKB-CPT1BH3BT56 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC1.69□□□□□ -2.14
CHKB-CPT1BH3BT56 AP001029.3-201ENST00000588063 596 ntBASIC1.69□□□□□ -2.14
CHKB-CPT1BH3BT56 RPL12P25-202ENST00000598100 674 ntBASIC1.69□□□□□ -2.14
CHKB-CPT1BH3BT56 NUTF2P8-201ENST00000604593 363 ntBASIC1.69□□□□□ -2.14
CHKB-CPT1BH3BT56 RNU4-89P-201ENST00000607443 133 ntBASIC1.69□□□□□ -2.14
CHKB-CPT1BH3BT56 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC1.69□□□□□ -2.14
CHKB-CPT1BH3BT56 AP000894.4-201ENST00000610185 483 ntBASIC1.69□□□□□ -2.14
CHKB-CPT1BH3BT56 AC005344.1-201ENST00000613391 459 ntBASIC1.69□□□□□ -2.14
CHKB-CPT1BH3BT56 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC1.69□□□□□ -2.14
CHKB-CPT1BH3BT56 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC1.69□□□□□ -2.14
CHKB-CPT1BH3BT56 MIR8059-201ENST00000620427 81 ntBASIC1.69□□□□□ -2.14
CHKB-CPT1BH3BT56 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC1.69□□□□□ -2.14
CHKB-CPT1BH3BT56 AC099506.2-201ENST00000623074 221 ntBASIC1.69□□□□□ -2.14
CHKB-CPT1BH3BT56 AC020923.1-201ENST00000624021 917 ntBASIC1.69□□□□□ -2.14
CHKB-CPT1BH3BT56 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC1.69□□□□□ -2.14
CHKB-CPT1BH3BT56 FAM157B-203ENST00000639350 358 ntBASIC1.69□□□□□ -2.14
CHKB-CPT1BH3BT56 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
CHKB-CPT1BH3BT56 AP004289.2-201ENST00000444413 1457 ntBASIC1.69□□□□□ -2.14
CHKB-CPT1BH3BT56 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.69□□□□□ -2.14
CHKB-CPT1BH3BT56 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 AL359693.1-201ENST00000614959 2407 ntBASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 AL590763.1-201ENST00000398297 1545 ntBASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 ZNF734P-201ENST00000419494 1534 ntBASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 SNORA67.1-201ENST00000364749 141 ntBASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 SNORD21-201ENST00000383953 95 ntBASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 RNU6-1181P-201ENST00000384191 106 ntBASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 RPL31P1-201ENST00000398116 372 ntBASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 RPS4XP7-201ENST00000406274 780 ntBASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 RNA5SP181-201ENST00000410246 98 ntBASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 RN7SKP273-201ENST00000411392 314 ntBASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 AL451074.5-201ENST00000415894 435 ntBASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 Z82209.1-201ENST00000422141 2135 ntBASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 SDCBPP2-201ENST00000424643 885 ntBASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 RPEP3-201ENST00000425462 676 ntBASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 DNAJC19P7-201ENST00000428811 344 ntBASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 CCNB1IP1P2-201ENST00000432876 818 ntBASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 TBCAP1-201ENST00000436520 327 ntBASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 RABEPKP1-201ENST00000440529 1026 ntBASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 RRM2P4-201ENST00000441721 562 ntBASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 RN7SL168P-201ENST00000463821 279 ntBASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 AC022336.1-201ENST00000475510 337 ntBASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 RN7SL297P-201ENST00000483161 293 ntBASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 NAMPTP2-201ENST00000505629 1115 ntBASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 HMGB3P3-201ENST00000510526 400 ntBASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 AC026412.2-201ENST00000512270 1075 ntBASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 RNA5SP92-201ENST00000516437 110 ntBASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 HMGB1P41-201ENST00000520234 440 ntBASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 OR4R3P-201ENST00000525084 838 ntBASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 HMGN2P6-201ENST00000551091 273 ntBASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 ACTR3BP3-201ENST00000565577 979 ntBASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 MTND4LP24-201ENST00000572277 291 ntBASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 MIR1269B-201ENST00000580405 75 ntBASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 NF1P10-201ENST00000613227 742 ntBASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 uc_338.25-201ENST00000613756 156 ntBASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 Z99129.2-201ENST00000619967 314 ntBASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 AL356321.1-201ENST00000621360 228 ntBASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 RPL23AP61-201ENST00000623642 466 ntBASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 AC015726.3-201ENST00000624501 418 ntBASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 PABPC1P9-201ENST00000426076 1612 ntBASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CHKB-CPT1BH3BT56 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 PABPC1P7-201ENST00000413177 1513 ntBASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 SNORA25.6-201ENST00000364121 118 ntBASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 RNU1-64P-201ENST00000365443 163 ntBASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 MIR592-201ENST00000384959 97 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms