Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC187A0A096LP49 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC187A0A096LP49 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 AC063976.2-201ENST00000425667 3556 ntBASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 RNU6-984P-201ENST00000363236 109 ntBASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 Y_RNA.126-201ENST00000363382 111 ntBASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 RNY3P14-201ENST00000384309 102 ntBASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 MIR649-201ENST00000384843 97 ntBASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 Z98745.1-201ENST00000402553 494 ntBASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 RPL36P19-201ENST00000430744 301 ntBASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 UBE2FP3-201ENST00000436366 524 ntBASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 RBMX2P4-201ENST00000441256 376 ntBASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 TRGVB-201ENST00000453257 471 ntBASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 MTCO3P2-201ENST00000457365 171 ntBASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 AC245028.2-201ENST00000458673 253 ntBASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 AC090013.1-201ENST00000485147 480 ntBASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 AC110792.2-201ENST00000510278 224 ntBASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 AC018797.3-201ENST00000513388 1241 ntBASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 Y_RNA.695-201ENST00000516715 107 ntBASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 RN7SKP82-201ENST00000516786 223 ntBASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 AC074029.1-201ENST00000552531 1044 ntBASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 CYCSP2-201ENST00000558168 301 ntBASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 AC234778.2-201ENST00000566241 354 ntBASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 RSL24D1P11-201ENST00000591045 491 ntBASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 HSPE1P14-201ENST00000605812 302 ntBASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 AC106028.5-201ENST00000610332 395 ntBASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 AC243773.3-201ENST00000613270 256 ntBASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 AC025588.4-201ENST00000615802 908 ntBASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 AL359314.1-201ENST00000616913 261 ntBASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 AC099842.1-201ENST00000619919 596 ntBASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 AL590240.3-201ENST00000621416 943 ntBASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 AC018816.2-201ENST00000621460 353 ntBASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 AC022140.2-201ENST00000623500 188 ntBASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 AC231657.1-201ENST00000624313 397 ntBASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 AC011944.2-201ENST00000624440 683 ntBASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 AC117529.2-201ENST00000512159 2068 ntBASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC187A0A096LP49 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC187A0A096LP49 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC187A0A096LP49 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
CCDC187A0A096LP49 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC187A0A096LP49 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC187A0A096LP49 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC187A0A096LP49 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC187A0A096LP49 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
CCDC187A0A096LP49 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC187A0A096LP49 RNU6-374P-201ENST00000364146 108 ntBASIC4.49□□□□□ -1.69
CCDC187A0A096LP49 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC187A0A096LP49 RNU6-1293P-201ENST00000384077 107 ntBASIC4.49□□□□□ -1.69
CCDC187A0A096LP49 RNU6-1215P-201ENST00000384441 102 ntBASIC4.49□□□□□ -1.69
CCDC187A0A096LP49 AC016831.2-201ENST00000417179 352 ntBASIC4.49□□□□□ -1.69
CCDC187A0A096LP49 AC073136.2-201ENST00000417282 849 ntBASIC4.49□□□□□ -1.69
CCDC187A0A096LP49 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC4.49□□□□□ -1.69
CCDC187A0A096LP49 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC187A0A096LP49 AC096632.1-201ENST00000427395 310 ntBASIC4.49□□□□□ -1.69
CCDC187A0A096LP49 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC187A0A096LP49 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.49□□□□□ -1.69
CCDC187A0A096LP49 BMS1P19-201ENST00000433925 393 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms