Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 OR4H6P-201ENST00000563771 921 ntBASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 AC026898.1-201ENST00000586404 571 ntBASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 AC005332.4-201ENST00000592752 579 ntBASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 AL360012.1-201ENST00000602813 131 ntBASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 AC116667.2-201ENST00000641075 823 ntBASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 AL359976.1-201ENST00000418655 3528 ntBASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PCDHGA11Q9Y5H2 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 KPNA2P1-201ENST00000458289 1591 ntBASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 AL034546.1-201ENST00000623740 3693 ntBASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 Y_RNA.252-201ENST00000364556 101 ntBASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 RNA5SP485-201ENST00000365053 119 ntBASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 RNA5SP219-201ENST00000390940 113 ntBASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 RPL30P2-201ENST00000414021 291 ntBASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 GJA6P-201ENST00000415117 1042 ntBASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 RPL7P28-201ENST00000437739 740 ntBASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 AC005094.1-201ENST00000440420 368 ntBASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 AC079922.1-201ENST00000443291 359 ntBASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 AC073476.1-201ENST00000452854 407 ntBASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 RPS27AP1-201ENST00000475545 471 ntBASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 AC108078.2-201ENST00000510750 236 ntBASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 RNA5SP418-201ENST00000515951 117 ntBASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 Y_RNA.661-201ENST00000516003 99 ntBASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 RNU6-1016P-201ENST00000516689 94 ntBASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 MYL12BP1-201ENST00000569826 507 ntBASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 MIR3941-201ENST00000582572 103 ntBASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 AC011890.2-201ENST00000613393 294 ntBASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 MIR6774-201ENST00000614651 70 ntBASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 AL138726.1-201ENST00000614873 333 ntBASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 AC211486.4-201ENST00000621495 113 ntBASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 NRK-204ENST00000540278 1687 ntTSL 2 BASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
PCDHGA11Q9Y5H2 AC024651.2-201ENST00000562480 2098 ntBASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 OSBPL9P4-201ENST00000371707 1800 ntBASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 AC009229.4-201ENST00000623854 1947 ntBASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 XIAPP3-201ENST00000312918 795 ntBASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms