Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 AC005592.1-201ENST00000566527 1640 ntBASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 COX6B1P3-201ENST00000312310 260 ntBASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 RNU6-490P-201ENST00000362985 107 ntBASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 RN7SKP275-201ENST00000364626 301 ntBASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 SNORA70H-201ENST00000383910 135 ntBASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 SNORA70J-201ENST00000384182 135 ntBASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 RNU6-1127P-201ENST00000384580 107 ntBASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 GJA6P-201ENST00000415117 1042 ntBASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 AL354707.3-201ENST00000427308 331 ntBASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 AC079922.1-201ENST00000443291 359 ntBASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 HMGB3P21-201ENST00000452483 547 ntBASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 RPL21P8-201ENST00000465083 535 ntBASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 RPS20P21-201ENST00000466859 343 ntBASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 AC092451.1-201ENST00000480211 153 ntBASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 AC104109.1-201ENST00000498563 436 ntBASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 AC011411.1-201ENST00000509592 876 ntBASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 RNU4ATAC10P-201ENST00000516967 122 ntBASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 AP005639.1-201ENST00000526939 192 ntBASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 AC073046.2-201ENST00000604756 527 ntBASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 AL591167.1-201ENST00000607321 456 ntBASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 DLEU2_5.1-201ENST00000615567 84 ntBASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 ATP5A1P2-202ENST00000616464 443 ntBASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 MIR6729-201ENST00000618194 65 ntBASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 MIR4302-201ENST00000638058 60 ntBASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 DLD-204ENST00000437604 1859 ntTSL 2 BASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 PANDAR-201ENST00000629595 1506 ntBASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 AKAP17BP-201ENST00000431706 2719 ntBASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 AC110373.1-201ENST00000505994 3505 ntBASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.19□□□□□ -1.42
PCDHB11Q9Y5F2 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 AC011504.1-201ENST00000623331 4103 ntBASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 AL442128.2-201ENST00000620246 1824 ntBASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 SNORD8-201ENST00000363915 110 ntBASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 RNU1-130P-201ENST00000363930 160 ntBASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 RNU6-960P-201ENST00000364056 120 ntBASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 RN7SKP78-201ENST00000364711 318 ntBASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 RNU1-115P-201ENST00000365329 160 ntBASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 Y_RNA.404-201ENST00000383978 102 ntBASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 Y_RNA.489-201ENST00000384410 101 ntBASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 MIR548I3-201ENST00000408378 149 ntBASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 MIR548I1-201ENST00000408810 149 ntBASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 RNU2-15P-201ENST00000410692 191 ntBASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 AC069213.2-201ENST00000420238 366 ntBASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 E2F6P2-201ENST00000420708 748 ntBASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 AC007568.1-201ENST00000422912 471 ntBASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 RPL23AP38-201ENST00000423801 469 ntBASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 AC009965.2-201ENST00000425328 970 ntBASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 RPL36AP13-201ENST00000457490 317 ntBASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 SNORD97-201ENST00000459187 142 ntBASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 AC116533.1-201ENST00000459748 321 ntBASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 RPL7P51-201ENST00000490532 749 ntBASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 ZNF519P4-201ENST00000514008 125 ntBASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 RNU6-699P-201ENST00000517081 110 ntBASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 Y_RNA.721-201ENST00000517207 102 ntBASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 AL133271.1-201ENST00000538229 291 ntBASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 AC073916.1-201ENST00000545095 130 ntBASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 AC023813.4-201ENST00000607580 580 ntBASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 AC009313.2-201ENST00000417893 1941 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms