Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.44□□□□□ -1.7
SHANK2Q9UPX8 snoU13.26-201ENST00000459452 105 ntBASIC4.44□□□□□ -1.7
SHANK2Q9UPX8 HMGB1P3-201ENST00000502802 616 ntBASIC4.44□□□□□ -1.7
SHANK2Q9UPX8 AL590808.1-201ENST00000618696 141 ntBASIC4.44□□□□□ -1.7
SHANK2Q9UPX8 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SHANK2Q9UPX8 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
SHANK2Q9UPX8 RPL7P26-201ENST00000333817 754 ntBASIC4.43□□□□□ -1.7
SHANK2Q9UPX8 SEPT7P2-202ENST00000398921 823 ntBASIC4.43□□□□□ -1.7
SHANK2Q9UPX8 RNA5SP247-201ENST00000411181 105 ntBASIC4.43□□□□□ -1.7
SHANK2Q9UPX8 AC127526.1-201ENST00000417526 366 ntBASIC4.43□□□□□ -1.7
SHANK2Q9UPX8 AC063976.3-201ENST00000426849 329 ntBASIC4.43□□□□□ -1.7
SHANK2Q9UPX8 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.43□□□□□ -1.7
SHANK2Q9UPX8 AC022018.1-201ENST00000430685 241 ntBASIC4.43□□□□□ -1.7
SHANK2Q9UPX8 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC4.43□□□□□ -1.7
SHANK2Q9UPX8 PPIAP17-201ENST00000438507 471 ntBASIC4.43□□□□□ -1.7
SHANK2Q9UPX8 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.43□□□□□ -1.7
SHANK2Q9UPX8 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.43□□□□□ -1.7
SHANK2Q9UPX8 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.43□□□□□ -1.7
SHANK2Q9UPX8 AP000916.1-201ENST00000533869 835 ntBASIC4.43□□□□□ -1.7
SHANK2Q9UPX8 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.43□□□□□ -1.7
SHANK2Q9UPX8 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.43□□□□□ -1.7
SHANK2Q9UPX8 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC4.43□□□□□ -1.7
SHANK2Q9UPX8 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.43□□□□□ -1.7
SHANK2Q9UPX8 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHANK2Q9UPX8 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHANK2Q9UPX8 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SHANK2Q9UPX8 MTND5P24-201ENST00000438892 1767 ntBASIC4.43□□□□□ -1.7
SHANK2Q9UPX8 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHANK2Q9UPX8 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHANK2Q9UPX8 AC110754.1-201ENST00000399740 601 ntBASIC4.43□□□□□ -1.7
SHANK2Q9UPX8 MIR887-201ENST00000401258 79 ntBASIC4.43□□□□□ -1.7
SHANK2Q9UPX8 AL138878.1-201ENST00000405131 347 ntBASIC4.43□□□□□ -1.7
SHANK2Q9UPX8 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.43□□□□□ -1.7
SHANK2Q9UPX8 RPL21P40-201ENST00000428586 483 ntBASIC4.43□□□□□ -1.7
SHANK2Q9UPX8 AL603825.1-201ENST00000438481 80 ntBASIC4.43□□□□□ -1.7
SHANK2Q9UPX8 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.43□□□□□ -1.7
SHANK2Q9UPX8 NIPA2P5-201ENST00000452282 464 ntBASIC4.43□□□□□ -1.7
SHANK2Q9UPX8 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.43□□□□□ -1.7
SHANK2Q9UPX8 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.43□□□□□ -1.7
SHANK2Q9UPX8 EEF1A1P37-201ENST00000522748 715 ntBASIC4.43□□□□□ -1.7
SHANK2Q9UPX8 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SHANK2Q9UPX8 AC009097.3-201ENST00000563557 1018 ntBASIC4.43□□□□□ -1.7
SHANK2Q9UPX8 RN7SL371P-201ENST00000578099 267 ntBASIC4.43□□□□□ -1.7
SHANK2Q9UPX8 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.43□□□□□ -1.7
SHANK2Q9UPX8 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.42□□□□□ -1.7
SHANK2Q9UPX8 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SHANK2Q9UPX8 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
SHANK2Q9UPX8 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.42□□□□□ -1.7
SHANK2Q9UPX8 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.42□□□□□ -1.7
SHANK2Q9UPX8 AL450263.2-201ENST00000439400 589 ntBASIC4.42□□□□□ -1.7
SHANK2Q9UPX8 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.42□□□□□ -1.7
SHANK2Q9UPX8 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.42□□□□□ -1.7
SHANK2Q9UPX8 SEPT7P3-201ENST00000455017 621 ntBASIC4.42□□□□□ -1.7
SHANK2Q9UPX8 AC117522.3-201ENST00000507974 584 ntBASIC4.42□□□□□ -1.7
SHANK2Q9UPX8 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SHANK2Q9UPX8 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.42□□□□□ -1.7
SHANK2Q9UPX8 OR4C2P-201ENST00000530855 1064 ntBASIC4.42□□□□□ -1.7
SHANK2Q9UPX8 AC079600.2-201ENST00000550076 130 ntBASIC4.42□□□□□ -1.7
SHANK2Q9UPX8 CYCSP39-201ENST00000565821 309 ntBASIC4.42□□□□□ -1.7
SHANK2Q9UPX8 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.42□□□□□ -1.7
SHANK2Q9UPX8 AC007318.2-201ENST00000620999 243 ntBASIC4.42□□□□□ -1.7
SHANK2Q9UPX8 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.42□□□□□ -1.7
SHANK2Q9UPX8 AC243829.7-201ENST00000633081 225 ntBASIC4.42□□□□□ -1.7
SHANK2Q9UPX8 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.41□□□□□ -1.7
SHANK2Q9UPX8 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.41□□□□□ -1.7
SHANK2Q9UPX8 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.41□□□□□ -1.7
SHANK2Q9UPX8 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
SHANK2Q9UPX8 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.41□□□□□ -1.7
SHANK2Q9UPX8 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SHANK2Q9UPX8 HMGB3P6-201ENST00000444896 598 ntBASIC4.41□□□□□ -1.7
SHANK2Q9UPX8 ELF2P3-201ENST00000445099 1506 ntBASIC4.41□□□□□ -1.7
SHANK2Q9UPX8 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.41□□□□□ -1.7
SHANK2Q9UPX8 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SHANK2Q9UPX8 AC107016.2-201ENST00000547968 190 ntBASIC4.41□□□□□ -1.7
SHANK2Q9UPX8 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
SHANK2Q9UPX8 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.41□□□□□ -1.7
SHANK2Q9UPX8 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.4□□□□□ -1.7
SHANK2Q9UPX8 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SHANK2Q9UPX8 RPS4XP5-202ENST00000449995 1334 ntBASIC4.4□□□□□ -1.71
SHANK2Q9UPX8 GTF2IP23-201ENST00000423746 351 ntBASIC4.4□□□□□ -1.71
SHANK2Q9UPX8 FAR1P1-201ENST00000427163 934 ntBASIC4.4□□□□□ -1.71
SHANK2Q9UPX8 AC007563.3-201ENST00000433233 371 ntBASIC4.4□□□□□ -1.71
SHANK2Q9UPX8 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.4□□□□□ -1.71
SHANK2Q9UPX8 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.4□□□□□ -1.71
SHANK2Q9UPX8 RFPL4AP3-201ENST00000515267 345 ntBASIC4.4□□□□□ -1.71
SHANK2Q9UPX8 AC138761.3-201ENST00000579993 334 ntBASIC4.4□□□□□ -1.71
SHANK2Q9UPX8 AL035413.2-201ENST00000604801 525 ntBASIC4.4□□□□□ -1.71
SHANK2Q9UPX8 AC007619.2-201ENST00000605743 379 ntBASIC4.4□□□□□ -1.71
SHANK2Q9UPX8 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.4□□□□□ -1.71
SHANK2Q9UPX8 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC4.4□□□□□ -1.71
SHANK2Q9UPX8 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SHANK2Q9UPX8 NEAT1-202ENST00000501122 22743 ntBASIC4.4□□□□□ -1.71
SHANK2Q9UPX8 AC007336.1-201ENST00000576365 3828 ntBASIC4.39□□□□□ -1.71
SHANK2Q9UPX8 MTND4P10-201ENST00000446199 1363 ntBASIC4.39□□□□□ -1.71
SHANK2Q9UPX8 ELL2P4-201ENST00000446870 1376 ntBASIC4.39□□□□□ -1.71
SHANK2Q9UPX8 RNU6ATAC3P-201ENST00000387974 126 ntBASIC4.39□□□□□ -1.71
SHANK2Q9UPX8 DUTP6-201ENST00000425573 462 ntBASIC4.39□□□□□ -1.71
SHANK2Q9UPX8 AC099063.2-201ENST00000446360 662 ntBASIC4.39□□□□□ -1.71
SHANK2Q9UPX8 RNU4-29P-201ENST00000515943 174 ntBASIC4.39□□□□□ -1.71
SHANK2Q9UPX8 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms