Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
PHF8Q9UPP1 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC8.17□□□□□ -1.1
PHF8Q9UPP1 AC009902.3-201ENST00000606235 2172 ntBASIC8.17□□□□□ -1.1
PHF8Q9UPP1 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PHF8Q9UPP1 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
PHF8Q9UPP1 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PHF8Q9UPP1 Y_RNA.222-201ENST00000364264 102 ntBASIC8.16□□□□□ -1.1
PHF8Q9UPP1 SNORD113-1-201ENST00000365321 69 ntBASIC8.16□□□□□ -1.1
PHF8Q9UPP1 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PHF8Q9UPP1 RNU6-128P-201ENST00000383976 107 ntBASIC8.16□□□□□ -1.1
PHF8Q9UPP1 SOCS5P3-201ENST00000425115 1576 ntBASIC8.16□□□□□ -1.1
PHF8Q9UPP1 RPL36AP6-201ENST00000435770 321 ntBASIC8.16□□□□□ -1.1
PHF8Q9UPP1 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC8.16□□□□□ -1.1
PHF8Q9UPP1 AL390119.1-201ENST00000440329 312 ntBASIC8.16□□□□□ -1.1
PHF8Q9UPP1 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC8.16□□□□□ -1.1
PHF8Q9UPP1 HMGB3P21-201ENST00000452483 547 ntBASIC8.16□□□□□ -1.1
PHF8Q9UPP1 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC8.16□□□□□ -1.1
PHF8Q9UPP1 AC133473.1-201ENST00000455173 299 ntBASIC8.16□□□□□ -1.1
PHF8Q9UPP1 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PHF8Q9UPP1 AC104164.1-201ENST00000460282 590 ntBASIC8.16□□□□□ -1.1
PHF8Q9UPP1 RPS3AP41-201ENST00000462701 778 ntBASIC8.16□□□□□ -1.1
PHF8Q9UPP1 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC8.16□□□□□ -1.1
PHF8Q9UPP1 AC231760.1-201ENST00000498002 260 ntBASIC8.16□□□□□ -1.1
PHF8Q9UPP1 AC006499.3-201ENST00000506077 748 ntBASIC8.16□□□□□ -1.1
PHF8Q9UPP1 Y_RNA.673-201ENST00000516306 88 ntBASIC8.16□□□□□ -1.1
PHF8Q9UPP1 HMGB1P42-201ENST00000532126 553 ntBASIC8.16□□□□□ -1.1
PHF8Q9UPP1 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC8.16□□□□□ -1.1
PHF8Q9UPP1 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PHF8Q9UPP1 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC8.16□□□□□ -1.1
PHF8Q9UPP1 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC8.16□□□□□ -1.1
PHF8Q9UPP1 AL138825.1-201ENST00000618587 192 ntBASIC8.16□□□□□ -1.1
PHF8Q9UPP1 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC8.16□□□□□ -1.1
PHF8Q9UPP1 AP000843.1-201ENST00000624880 701 ntBASIC8.16□□□□□ -1.1
PHF8Q9UPP1 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC8.16□□□□□ -1.1
PHF8Q9UPP1 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC8.16□□□□□ -1.1
PHF8Q9UPP1 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC8.16□□□□□ -1.1
PHF8Q9UPP1 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
PHF8Q9UPP1 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PHF8Q9UPP1 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
PHF8Q9UPP1 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC8.16□□□□□ -1.1
PHF8Q9UPP1 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PHF8Q9UPP1 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PHF8Q9UPP1 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
PHF8Q9UPP1 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC8.15□□□□□ -1.1
PHF8Q9UPP1 AC007342.5-201ENST00000571340 2142 ntBASIC8.15□□□□□ -1.1
PHF8Q9UPP1 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC8.15□□□□□ -1.1
PHF8Q9UPP1 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
PHF8Q9UPP1 CASC19-284ENST00000642142 1868 ntBASIC8.15□□□□□ -1.1
PHF8Q9UPP1 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC8.15□□□□□ -1.1
PHF8Q9UPP1 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
PHF8Q9UPP1 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
PHF8Q9UPP1 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
PHF8Q9UPP1 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC8.15□□□□□ -1.1
PHF8Q9UPP1 Y_RNA.29-201ENST00000362570 113 ntBASIC8.15□□□□□ -1.1
PHF8Q9UPP1 AL023807.1-201ENST00000407932 359 ntBASIC8.15□□□□□ -1.1
PHF8Q9UPP1 MIR1286-201ENST00000408112 78 ntBASIC8.15□□□□□ -1.1
PHF8Q9UPP1 RPL23AP60-201ENST00000450011 454 ntBASIC8.15□□□□□ -1.1
PHF8Q9UPP1 RPL21P93-201ENST00000480465 489 ntBASIC8.15□□□□□ -1.1
PHF8Q9UPP1 HMGB1P35-201ENST00000503360 598 ntBASIC8.15□□□□□ -1.1
PHF8Q9UPP1 AC021146.3-201ENST00000511911 260 ntBASIC8.15□□□□□ -1.1
PHF8Q9UPP1 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC8.15□□□□□ -1.1
PHF8Q9UPP1 RNU6-111P-201ENST00000517179 105 ntBASIC8.15□□□□□ -1.1
PHF8Q9UPP1 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
PHF8Q9UPP1 SOD1P3-201ENST00000518682 454 ntBASIC8.15□□□□□ -1.1
PHF8Q9UPP1 IGHV1-14-201ENST00000523391 241 ntBASIC8.15□□□□□ -1.1
PHF8Q9UPP1 HSPE1P20-201ENST00000538133 289 ntBASIC8.15□□□□□ -1.1
PHF8Q9UPP1 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC8.15□□□□□ -1.1
PHF8Q9UPP1 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC8.15□□□□□ -1.1
PHF8Q9UPP1 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC8.15□□□□□ -1.1
PHF8Q9UPP1 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC8.15□□□□□ -1.1
PHF8Q9UPP1 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
PHF8Q9UPP1 HMGB2P1-201ENST00000591146 634 ntBASIC8.15□□□□□ -1.1
PHF8Q9UPP1 FKBP1AP1-201ENST00000594588 318 ntBASIC8.15□□□□□ -1.1
PHF8Q9UPP1 AL031176.1-201ENST00000604554 466 ntBASIC8.15□□□□□ -1.1
PHF8Q9UPP1 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC8.15□□□□□ -1.1
PHF8Q9UPP1 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
PHF8Q9UPP1 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC8.15□□□□□ -1.1
PHF8Q9UPP1 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
PHF8Q9UPP1 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
PHF8Q9UPP1 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.11
PHF8Q9UPP1 AC107021.2-201ENST00000567714 2095 ntBASIC8.15□□□□□ -1.11
PHF8Q9UPP1 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC8.15□□□□□ -1.11
PHF8Q9UPP1 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.11
PHF8Q9UPP1 AL662795.2-201ENST00000624252 3706 ntBASIC8.15□□□□□ -1.11
PHF8Q9UPP1 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
PHF8Q9UPP1 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC8.14□□□□□ -1.11
PHF8Q9UPP1 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
PHF8Q9UPP1 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PHF8Q9UPP1 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PHF8Q9UPP1 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
PHF8Q9UPP1 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC8.14□□□□□ -1.11
PHF8Q9UPP1 APP-206ENST00000359726 3294 ntTSL 2 BASIC8.14□□□□□ -1.11
PHF8Q9UPP1 RNU6-97P-201ENST00000363387 104 ntBASIC8.14□□□□□ -1.11
PHF8Q9UPP1 Y_RNA.150-201ENST00000363562 102 ntBASIC8.14□□□□□ -1.11
PHF8Q9UPP1 Y_RNA.518-201ENST00000384552 113 ntBASIC8.14□□□□□ -1.11
PHF8Q9UPP1 MRM2-202ENST00000407040 582 ntTSL 3 BASIC8.14□□□□□ -1.11
PHF8Q9UPP1 EEF1A1P29-201ENST00000416082 1096 ntBASIC8.14□□□□□ -1.11
PHF8Q9UPP1 RPS4XP5-201ENST00000419038 768 ntBASIC8.14□□□□□ -1.11
PHF8Q9UPP1 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC8.14□□□□□ -1.11
PHF8Q9UPP1 RPL7AP10-201ENST00000481016 791 ntBASIC8.14□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms