Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AL390816.3-201ENST00000604527 1066 ntBASIC4.65□□□□□ -1.67
HDAC6Q9UBN7 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.65□□□□□ -1.67
HDAC6Q9UBN7 AC097065.2-201ENST00000608159 533 ntBASIC4.65□□□□□ -1.67
HDAC6Q9UBN7 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.65□□□□□ -1.67
HDAC6Q9UBN7 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.65□□□□□ -1.67
HDAC6Q9UBN7 AC099669.2-201ENST00000616549 437 ntBASIC4.65□□□□□ -1.67
HDAC6Q9UBN7 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.65□□□□□ -1.67
HDAC6Q9UBN7 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HDAC6Q9UBN7 AC114546.3-201ENST00000623582 1734 ntBASIC4.65□□□□□ -1.67
HDAC6Q9UBN7 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HDAC6Q9UBN7 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
HDAC6Q9UBN7 Z73965.1-201ENST00000623412 2297 ntBASIC4.65□□□□□ -1.67
HDAC6Q9UBN7 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
HDAC6Q9UBN7 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 AC104454.1-201ENST00000421341 1401 ntBASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 MIR670-201ENST00000390142 98 ntBASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 SNORD65.1-201ENST00000390889 71 ntBASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 RNA5SP104-201ENST00000410989 118 ntBASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 TPT1P2-201ENST00000413105 503 ntBASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 PAICSP7-201ENST00000419829 962 ntBASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 NANOGP6-201ENST00000429190 847 ntBASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 RPL23AP46-201ENST00000438548 490 ntBASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 IFNWP4-201ENST00000453148 294 ntBASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 S100A11P1-201ENST00000477525 312 ntBASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 MTCYBP16-201ENST00000509187 1129 ntBASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 RNU6-488P-201ENST00000515918 99 ntBASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 AC009220.3-201ENST00000604318 586 ntBASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 OR6R2P-201ENST00000609216 300 ntBASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 AC107075.1-201ENST00000613695 314 ntBASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 AC023158.2-201ENST00000614876 543 ntBASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 AC112200.1-201ENST00000625015 234 ntBASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.64□□□□□ -1.67
HDAC6Q9UBN7 AC008725.1-201ENST00000605123 2263 ntBASIC4.63□□□□□ -1.67
HDAC6Q9UBN7 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HDAC6Q9UBN7 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
HDAC6Q9UBN7 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.63□□□□□ -1.67
HDAC6Q9UBN7 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HDAC6Q9UBN7 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HDAC6Q9UBN7 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
HDAC6Q9UBN7 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HDAC6Q9UBN7 RNU6-1214P-201ENST00000363650 109 ntBASIC4.63□□□□□ -1.67
HDAC6Q9UBN7 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.63□□□□□ -1.67
HDAC6Q9UBN7 MTND5P25-201ENST00000430499 799 ntBASIC4.63□□□□□ -1.67
HDAC6Q9UBN7 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.63□□□□□ -1.67
HDAC6Q9UBN7 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.63□□□□□ -1.67
HDAC6Q9UBN7 COX7BP2-201ENST00000437976 242 ntBASIC4.63□□□□□ -1.67
HDAC6Q9UBN7 AC004865.1-201ENST00000442276 1003 ntBASIC4.63□□□□□ -1.67
HDAC6Q9UBN7 VN1R40P-201ENST00000455196 941 ntBASIC4.63□□□□□ -1.67
HDAC6Q9UBN7 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC4.63□□□□□ -1.67
HDAC6Q9UBN7 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.63□□□□□ -1.67
HDAC6Q9UBN7 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.63□□□□□ -1.67
HDAC6Q9UBN7 AC104164.2-201ENST00000496953 495 ntBASIC4.63□□□□□ -1.67
HDAC6Q9UBN7 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HDAC6Q9UBN7 AC108145.1-201ENST00000503770 153 ntBASIC4.63□□□□□ -1.67
HDAC6Q9UBN7 AC091951.3-201ENST00000504093 246 ntBASIC4.63□□□□□ -1.67
HDAC6Q9UBN7 AC139783.2-201ENST00000504847 1145 ntBASIC4.63□□□□□ -1.67
HDAC6Q9UBN7 AC119751.5-201ENST00000514077 770 ntBASIC4.63□□□□□ -1.67
HDAC6Q9UBN7 RN7SKP96-201ENST00000516948 297 ntBASIC4.63□□□□□ -1.67
HDAC6Q9UBN7 AC087808.1-201ENST00000520501 361 ntBASIC4.63□□□□□ -1.67
HDAC6Q9UBN7 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.63□□□□□ -1.67
HDAC6Q9UBN7 AF279873.1-201ENST00000523393 313 ntBASIC4.63□□□□□ -1.67
HDAC6Q9UBN7 SMARCE1P4-201ENST00000523647 241 ntBASIC4.63□□□□□ -1.67
HDAC6Q9UBN7 AP001636.2-201ENST00000525517 696 ntBASIC4.63□□□□□ -1.67
HDAC6Q9UBN7 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.63□□□□□ -1.67
HDAC6Q9UBN7 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.63□□□□□ -1.67
HDAC6Q9UBN7 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.63□□□□□ -1.67
HDAC6Q9UBN7 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.63□□□□□ -1.67
HDAC6Q9UBN7 AC002400.1-201ENST00000569310 726 ntBASIC4.63□□□□□ -1.67
HDAC6Q9UBN7 HNRNPCP4-201ENST00000571636 900 ntBASIC4.63□□□□□ -1.67
HDAC6Q9UBN7 MIR4444-1-201ENST00000581696 74 ntBASIC4.63□□□□□ -1.67
HDAC6Q9UBN7 MIR4444-2-201ENST00000584390 74 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms