Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.72□□□□□ -1.81
NDE1Q9NXR1 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.72□□□□□ -1.81
NDE1Q9NXR1 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.72□□□□□ -1.81
NDE1Q9NXR1 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.72□□□□□ -1.81
NDE1Q9NXR1 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.72□□□□□ -1.81
NDE1Q9NXR1 VN1R88P-201ENST00000596787 292 ntBASIC3.72□□□□□ -1.81
NDE1Q9NXR1 NTAN1P1-201ENST00000603150 646 ntBASIC3.72□□□□□ -1.81
NDE1Q9NXR1 AC016717.3-201ENST00000624730 554 ntBASIC3.72□□□□□ -1.81
NDE1Q9NXR1 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.72□□□□□ -1.81
NDE1Q9NXR1 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
NDE1Q9NXR1 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
NDE1Q9NXR1 ZNF876P-202ENST00000398732 1485 ntBASIC3.72□□□□□ -1.81
NDE1Q9NXR1 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
NDE1Q9NXR1 ASNSP1-204ENST00000641977 1664 ntBASIC3.71□□□□□ -1.81
NDE1Q9NXR1 DCAF13P3-201ENST00000561147 1334 ntBASIC3.71□□□□□ -1.81
NDE1Q9NXR1 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
NDE1Q9NXR1 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
NDE1Q9NXR1 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
NDE1Q9NXR1 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
NDE1Q9NXR1 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.71□□□□□ -1.82
NDE1Q9NXR1 AC119744.1-201ENST00000454746 1715 ntBASIC3.71□□□□□ -1.82
NDE1Q9NXR1 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NDE1Q9NXR1 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NDE1Q9NXR1 RNA5SP399-201ENST00000364003 117 ntBASIC3.71□□□□□ -1.82
NDE1Q9NXR1 snoZ40.1-201ENST00000364540 72 ntBASIC3.71□□□□□ -1.82
NDE1Q9NXR1 RNU6-283P-201ENST00000364788 107 ntBASIC3.71□□□□□ -1.82
NDE1Q9NXR1 SNORD6-201ENST00000365444 73 ntBASIC3.71□□□□□ -1.82
NDE1Q9NXR1 SNORD116.1-201ENST00000365628 92 ntBASIC3.71□□□□□ -1.82
NDE1Q9NXR1 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.71□□□□□ -1.82
NDE1Q9NXR1 OR52E6-202ENST00000379946 954 ntBASIC3.71□□□□□ -1.82
NDE1Q9NXR1 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.71□□□□□ -1.82
NDE1Q9NXR1 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.71□□□□□ -1.82
NDE1Q9NXR1 MTND4P13-201ENST00000402078 1023 ntBASIC3.71□□□□□ -1.82
NDE1Q9NXR1 SFR1P1-201ENST00000403720 688 ntBASIC3.71□□□□□ -1.82
NDE1Q9NXR1 HSPE1P12-201ENST00000412576 301 ntBASIC3.71□□□□□ -1.82
NDE1Q9NXR1 AC009237.5-201ENST00000414271 501 ntBASIC3.71□□□□□ -1.82
NDE1Q9NXR1 AC234782.4-201ENST00000417646 1048 ntBASIC3.71□□□□□ -1.82
NDE1Q9NXR1 OR5BE1P-201ENST00000425977 939 ntBASIC3.71□□□□□ -1.82
NDE1Q9NXR1 AC006989.1-201ENST00000427212 131 ntBASIC3.71□□□□□ -1.82
NDE1Q9NXR1 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.71□□□□□ -1.82
NDE1Q9NXR1 CETN4P-201ENST00000432407 469 ntBASIC3.71□□□□□ -1.82
NDE1Q9NXR1 RPL21P110-201ENST00000433345 446 ntBASIC3.71□□□□□ -1.82
NDE1Q9NXR1 BTF3P10-201ENST00000433415 495 ntBASIC3.71□□□□□ -1.82
NDE1Q9NXR1 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.71□□□□□ -1.82
NDE1Q9NXR1 TPT1P13-201ENST00000449760 499 ntBASIC3.71□□□□□ -1.82
NDE1Q9NXR1 AC233982.1-201ENST00000451247 436 ntBASIC3.71□□□□□ -1.82
NDE1Q9NXR1 RN7SL354P-201ENST00000469282 294 ntBASIC3.71□□□□□ -1.82
NDE1Q9NXR1 AC007537.2-201ENST00000472093 511 ntBASIC3.71□□□□□ -1.82
NDE1Q9NXR1 AC084198.1-201ENST00000477747 402 ntBASIC3.71□□□□□ -1.82
NDE1Q9NXR1 AC015724.1-201ENST00000478577 156 ntBASIC3.71□□□□□ -1.82
NDE1Q9NXR1 CEACAMP10-202ENST00000495431 496 ntBASIC3.71□□□□□ -1.82
NDE1Q9NXR1 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.71□□□□□ -1.82
NDE1Q9NXR1 PCBP2P3-201ENST00000509726 843 ntBASIC3.71□□□□□ -1.82
NDE1Q9NXR1 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.71□□□□□ -1.82
NDE1Q9NXR1 Vault.1-201ENST00000516474 102 ntBASIC3.71□□□□□ -1.82
NDE1Q9NXR1 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.71□□□□□ -1.82
NDE1Q9NXR1 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.71□□□□□ -1.82
NDE1Q9NXR1 MTND4LP24-201ENST00000572277 291 ntBASIC3.71□□□□□ -1.82
NDE1Q9NXR1 MIR4480-201ENST00000582492 71 ntBASIC3.71□□□□□ -1.82
NDE1Q9NXR1 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.71□□□□□ -1.82
NDE1Q9NXR1 VN1R78P-201ENST00000597393 564 ntBASIC3.71□□□□□ -1.82
NDE1Q9NXR1 AC068313.1-201ENST00000604028 1008 ntBASIC3.71□□□□□ -1.82
NDE1Q9NXR1 ELOCP35-201ENST00000604289 336 ntBASIC3.71□□□□□ -1.82
NDE1Q9NXR1 AC016877.3-201ENST00000606778 504 ntBASIC3.71□□□□□ -1.82
NDE1Q9NXR1 AC007349.4-201ENST00000608114 532 ntBASIC3.71□□□□□ -1.82
NDE1Q9NXR1 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.71□□□□□ -1.82
NDE1Q9NXR1 AC243654.2-201ENST00000612843 443 ntBASIC3.71□□□□□ -1.82
NDE1Q9NXR1 AC021755.4-201ENST00000616620 456 ntBASIC3.71□□□□□ -1.82
NDE1Q9NXR1 AC018926.3-201ENST00000618841 406 ntBASIC3.71□□□□□ -1.82
NDE1Q9NXR1 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.71□□□□□ -1.82
NDE1Q9NXR1 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.71□□□□□ -1.82
NDE1Q9NXR1 AF001550.2-201ENST00000636643 217 ntBASIC3.71□□□□□ -1.82
NDE1Q9NXR1 OR5BE1P-202ENST00000641168 1176 ntBASIC3.71□□□□□ -1.82
NDE1Q9NXR1 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
NDE1Q9NXR1 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NDE1Q9NXR1 MTND4P8-201ENST00000514997 1362 ntBASIC3.71□□□□□ -1.82
NDE1Q9NXR1 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.71□□□□□ -1.82
NDE1Q9NXR1 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NDE1Q9NXR1 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NDE1Q9NXR1 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NDE1Q9NXR1 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
NDE1Q9NXR1 RNU6-707P-201ENST00000364647 95 ntBASIC3.7□□□□□ -1.82
NDE1Q9NXR1 RPS3AP23-201ENST00000401762 784 ntBASIC3.7□□□□□ -1.82
NDE1Q9NXR1 RPL31P52-201ENST00000407532 367 ntBASIC3.7□□□□□ -1.82
NDE1Q9NXR1 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.7□□□□□ -1.82
NDE1Q9NXR1 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NDE1Q9NXR1 Z75741.2-201ENST00000417272 1167 ntBASIC3.7□□□□□ -1.82
NDE1Q9NXR1 AL807761.1-201ENST00000417622 171 ntBASIC3.7□□□□□ -1.82
NDE1Q9NXR1 RPL31P12-201ENST00000422587 358 ntBASIC3.7□□□□□ -1.82
NDE1Q9NXR1 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.7□□□□□ -1.82
NDE1Q9NXR1 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.7□□□□□ -1.82
NDE1Q9NXR1 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.7□□□□□ -1.82
NDE1Q9NXR1 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.7□□□□□ -1.82
NDE1Q9NXR1 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.7□□□□□ -1.82
NDE1Q9NXR1 FGF7P5-201ENST00000441829 291 ntBASIC3.7□□□□□ -1.82
NDE1Q9NXR1 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.7□□□□□ -1.82
NDE1Q9NXR1 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.7□□□□□ -1.82
NDE1Q9NXR1 AC006539.3-201ENST00000454258 129 ntBASIC3.7□□□□□ -1.82
NDE1Q9NXR1 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.7□□□□□ -1.82
NDE1Q9NXR1 RNU7-170P-201ENST00000459303 61 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms