Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 RNA5SP189-201ENST00000364920 115 ntBASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 RNU6-761P-201ENST00000384148 107 ntBASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 SNORA70C-201ENST00000384538 135 ntBASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 MTND4LP20-201ENST00000402379 270 ntBASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 MTND2P16-201ENST00000419987 799 ntBASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 AL035410.1-201ENST00000427409 427 ntBASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 KCTD10P1-201ENST00000434203 625 ntBASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 RPL21P112-201ENST00000434403 463 ntBASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 TPTE2P3-201ENST00000441562 1189 ntBASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 EXOSC3P1-201ENST00000448649 500 ntBASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 RN7SL271P-201ENST00000487601 295 ntBASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 UBE2V1P12-201ENST00000503954 474 ntBASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 AC093767.1-201ENST00000504523 156 ntBASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 AC113420.1-201ENST00000507903 571 ntBASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 MTCO3P44-201ENST00000510977 541 ntBASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 AP000619.3-201ENST00000535634 1127 ntBASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 AL389895.1-201ENST00000554127 252 ntBASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 MTND3P13-201ENST00000574391 343 ntBASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 HMGN2P28-201ENST00000606102 262 ntBASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 AC016597.2-201ENST00000613256 341 ntBASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 AC023158.2-201ENST00000614876 543 ntBASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 AC004825.2-201ENST00000616634 455 ntBASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 Z82217.1-201ENST00000625157 8149 ntBASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 AC068254.2-201ENST00000623938 3577 ntBASIC4.47□□□□□ -1.69
BLOC1S4Q9NUP1 AC107982.1-201ENST00000507171 1300 ntBASIC4.46□□□□□ -1.69
BLOC1S4Q9NUP1 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
BLOC1S4Q9NUP1 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.46□□□□□ -1.69
BLOC1S4Q9NUP1 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 SNORA7.2-201ENST00000364446 145 ntBASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 RNU6-335P-201ENST00000364563 113 ntBASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 AL049693.1-201ENST00000402760 611 ntBASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 AL136310.1-201ENST00000404926 654 ntBASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 LUZP4P1-201ENST00000415420 344 ntBASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 AC006548.1-201ENST00000427470 102 ntBASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 USP9YP31-201ENST00000431405 881 ntBASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 OR4C10P-201ENST00000434991 931 ntBASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 AC083863.1-201ENST00000438811 231 ntBASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 VN1R25P-201ENST00000443385 738 ntBASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 MTCYBP11-201ENST00000447254 1109 ntBASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 AC007327.1-201ENST00000447461 264 ntBASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 AL589880.1-201ENST00000448271 287 ntBASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 VN1R40P-201ENST00000455196 941 ntBASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 RPL5P24-201ENST00000463742 885 ntBASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 PABPC1P3-201ENST00000469174 459 ntBASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 AL136126.1-201ENST00000473603 402 ntBASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 RN7SL860P-201ENST00000473738 223 ntBASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 AL132838.2-201ENST00000492041 314 ntBASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 RPL7P24-201ENST00000493052 752 ntBASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 AC025445.1-201ENST00000502728 300 ntBASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 AC139783.2-201ENST00000504847 1145 ntBASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 AC010460.2-201ENST00000509054 677 ntBASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 TPT1P8-201ENST00000510120 555 ntBASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 RNU6-1225P-201ENST00000516336 65 ntBASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 MYL12AP1-201ENST00000518490 515 ntBASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 AC138915.2-201ENST00000569776 97 ntBASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 AC012182.1-201ENST00000570133 895 ntBASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 SNRPGP15-201ENST00000600149 222 ntBASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 AC078899.5-201ENST00000612475 178 ntBASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 CR381572.1-201ENST00000625098 102 ntBASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
BLOC1S4Q9NUP1 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 150.7 ms