Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC091304.6-201ENST00000619761 202 ntBASIC3.98□□□□□ -1.77
SIX2Q9NPC8 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SIX2Q9NPC8 AC016717.3-201ENST00000624730 554 ntBASIC3.98□□□□□ -1.77
SIX2Q9NPC8 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.98□□□□□ -1.77
SIX2Q9NPC8 CDRT1-208ENST00000630868 794 ntBASIC3.98□□□□□ -1.77
SIX2Q9NPC8 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SIX2Q9NPC8 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.98□□□□□ -1.77
SIX2Q9NPC8 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SIX2Q9NPC8 SAGE2P-201ENST00000420011 2126 ntBASIC3.98□□□□□ -1.77
SIX2Q9NPC8 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.98□□□□□ -1.77
SIX2Q9NPC8 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SIX2Q9NPC8 AC096656.1-201ENST00000623826 1364 ntBASIC3.98□□□□□ -1.77
SIX2Q9NPC8 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
SIX2Q9NPC8 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SIX2Q9NPC8 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SIX2Q9NPC8 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SIX2Q9NPC8 AC046144.1-201ENST00000478559 1853 ntBASIC3.97□□□□□ -1.77
SIX2Q9NPC8 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
SIX2Q9NPC8 RNU6-1214P-201ENST00000363650 109 ntBASIC3.97□□□□□ -1.77
SIX2Q9NPC8 RNA5SP42-201ENST00000364278 115 ntBASIC3.97□□□□□ -1.77
SIX2Q9NPC8 RNA5SP515-201ENST00000364570 118 ntBASIC3.97□□□□□ -1.77
SIX2Q9NPC8 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.97□□□□□ -1.77
SIX2Q9NPC8 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.97□□□□□ -1.77
SIX2Q9NPC8 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.97□□□□□ -1.77
SIX2Q9NPC8 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SIX2Q9NPC8 RNU2-6P-201ENST00000411404 190 ntBASIC3.97□□□□□ -1.77
SIX2Q9NPC8 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.97□□□□□ -1.77
SIX2Q9NPC8 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.97□□□□□ -1.77
SIX2Q9NPC8 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.97□□□□□ -1.77
SIX2Q9NPC8 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.97□□□□□ -1.77
SIX2Q9NPC8 RPS12P5-201ENST00000423449 371 ntBASIC3.97□□□□□ -1.77
SIX2Q9NPC8 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.97□□□□□ -1.77
SIX2Q9NPC8 RPS26P47-201ENST00000427219 348 ntBASIC3.97□□□□□ -1.77
SIX2Q9NPC8 AC073069.1-201ENST00000428657 441 ntBASIC3.97□□□□□ -1.77
SIX2Q9NPC8 RPL21P110-201ENST00000433345 446 ntBASIC3.97□□□□□ -1.77
SIX2Q9NPC8 TMX2P1-201ENST00000436507 708 ntBASIC3.97□□□□□ -1.77
SIX2Q9NPC8 AL031663.1-201ENST00000437445 219 ntBASIC3.97□□□□□ -1.77
SIX2Q9NPC8 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.97□□□□□ -1.77
SIX2Q9NPC8 HMGB3P9-201ENST00000441799 583 ntBASIC3.97□□□□□ -1.77
SIX2Q9NPC8 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.97□□□□□ -1.77
SIX2Q9NPC8 AC007327.1-201ENST00000447461 264 ntBASIC3.97□□□□□ -1.77
SIX2Q9NPC8 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.97□□□□□ -1.77
SIX2Q9NPC8 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SIX2Q9NPC8 NANOGP10-201ENST00000453325 895 ntBASIC3.97□□□□□ -1.77
SIX2Q9NPC8 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.97□□□□□ -1.77
SIX2Q9NPC8 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.97□□□□□ -1.77
SIX2Q9NPC8 AL133162.1-201ENST00000463228 453 ntBASIC3.97□□□□□ -1.77
SIX2Q9NPC8 RPS20P21-201ENST00000466859 343 ntBASIC3.97□□□□□ -1.77
SIX2Q9NPC8 GAPDHP39-201ENST00000481866 979 ntBASIC3.97□□□□□ -1.77
SIX2Q9NPC8 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.97□□□□□ -1.77
SIX2Q9NPC8 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.97□□□□□ -1.77
SIX2Q9NPC8 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
SIX2Q9NPC8 AC118282.2-201ENST00000508739 374 ntBASIC3.97□□□□□ -1.77
SIX2Q9NPC8 IGKV2-36-201ENST00000519999 223 ntBASIC3.97□□□□□ -1.77
SIX2Q9NPC8 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.97□□□□□ -1.77
SIX2Q9NPC8 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.97□□□□□ -1.77
SIX2Q9NPC8 AADACP1-206ENST00000561502 1193 ntBASIC3.97□□□□□ -1.77
SIX2Q9NPC8 AC090751.1-201ENST00000566966 267 ntBASIC3.97□□□□□ -1.77
SIX2Q9NPC8 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.97□□□□□ -1.77
SIX2Q9NPC8 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.97□□□□□ -1.77
SIX2Q9NPC8 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.97□□□□□ -1.77
SIX2Q9NPC8 AC020910.2-201ENST00000603635 610 ntBASIC3.97□□□□□ -1.77
SIX2Q9NPC8 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
SIX2Q9NPC8 AL139344.1-201ENST00000605228 195 ntBASIC3.97□□□□□ -1.77
SIX2Q9NPC8 AC010857.1-201ENST00000606398 594 ntBASIC3.97□□□□□ -1.77
SIX2Q9NPC8 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.97□□□□□ -1.77
SIX2Q9NPC8 TUSC7.1-201ENST00000610969 165 ntBASIC3.97□□□□□ -1.77
SIX2Q9NPC8 AC017037.3-201ENST00000625016 472 ntBASIC3.97□□□□□ -1.77
SIX2Q9NPC8 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.97□□□□□ -1.77
SIX2Q9NPC8 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
SIX2Q9NPC8 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SIX2Q9NPC8 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
SIX2Q9NPC8 AL031985.3-201ENST00000565390 2449 ntBASIC3.96□□□□□ -1.77
SIX2Q9NPC8 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.96□□□□□ -1.78
SIX2Q9NPC8 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.96□□□□□ -1.78
SIX2Q9NPC8 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SIX2Q9NPC8 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SIX2Q9NPC8 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.96□□□□□ -1.78
SIX2Q9NPC8 RNU6-83P-201ENST00000384568 112 ntBASIC3.96□□□□□ -1.78
SIX2Q9NPC8 U8.11-201ENST00000384699 133 ntBASIC3.96□□□□□ -1.78
SIX2Q9NPC8 U8.12-201ENST00000384701 133 ntBASIC3.96□□□□□ -1.78
SIX2Q9NPC8 MIR16-1-201ENST00000385271 89 ntBASIC3.96□□□□□ -1.78
SIX2Q9NPC8 AC093719.1-202ENST00000392735 373 ntBASIC3.96□□□□□ -1.78
SIX2Q9NPC8 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.96□□□□□ -1.78
SIX2Q9NPC8 SDCBPP2-201ENST00000424643 885 ntBASIC3.96□□□□□ -1.78
SIX2Q9NPC8 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.96□□□□□ -1.78
SIX2Q9NPC8 GTF2IP7-202ENST00000436677 309 ntBASIC3.96□□□□□ -1.78
SIX2Q9NPC8 RPS29P7-201ENST00000439662 171 ntBASIC3.96□□□□□ -1.78
SIX2Q9NPC8 UBE2V1P5-201ENST00000440070 405 ntBASIC3.96□□□□□ -1.78
SIX2Q9NPC8 SETD6P1-201ENST00000444575 317 ntBASIC3.96□□□□□ -1.78
SIX2Q9NPC8 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.96□□□□□ -1.78
SIX2Q9NPC8 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC3.96□□□□□ -1.78
SIX2Q9NPC8 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.96□□□□□ -1.78
SIX2Q9NPC8 U8.18-201ENST00000459285 133 ntBASIC3.96□□□□□ -1.78
SIX2Q9NPC8 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.96□□□□□ -1.78
SIX2Q9NPC8 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.96□□□□□ -1.78
SIX2Q9NPC8 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.96□□□□□ -1.78
SIX2Q9NPC8 SNORA3.4-201ENST00000515969 96 ntBASIC3.96□□□□□ -1.78
SIX2Q9NPC8 RN7SKP21-201ENST00000516503 220 ntBASIC3.96□□□□□ -1.78
SIX2Q9NPC8 RNU5A-4P-201ENST00000516588 111 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms