Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC5.25□□□□□ -1.57
VTA1Q9NP79 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC5.25□□□□□ -1.57
VTA1Q9NP79 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VTA1Q9NP79 RPS24P1-201ENST00000438550 371 ntBASIC5.25□□□□□ -1.57
VTA1Q9NP79 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VTA1Q9NP79 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.25□□□□□ -1.57
VTA1Q9NP79 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC5.25□□□□□ -1.57
VTA1Q9NP79 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.25□□□□□ -1.57
VTA1Q9NP79 MEMO1P3-201ENST00000459811 302 ntBASIC5.25□□□□□ -1.57
VTA1Q9NP79 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
VTA1Q9NP79 UBTFL6-201ENST00000477929 1024 ntBASIC5.25□□□□□ -1.57
VTA1Q9NP79 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
VTA1Q9NP79 RNF138P1-201ENST00000502765 546 ntBASIC5.25□□□□□ -1.57
VTA1Q9NP79 POU5F1P7-201ENST00000508759 541 ntBASIC5.25□□□□□ -1.57
VTA1Q9NP79 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC5.25□□□□□ -1.57
VTA1Q9NP79 IGHV3-32-201ENST00000519182 355 ntBASIC5.25□□□□□ -1.57
VTA1Q9NP79 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VTA1Q9NP79 AC022790.1-201ENST00000522872 204 ntBASIC5.25□□□□□ -1.57
VTA1Q9NP79 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.25□□□□□ -1.57
VTA1Q9NP79 AC005868.1-201ENST00000536421 331 ntBASIC5.25□□□□□ -1.57
VTA1Q9NP79 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC5.25□□□□□ -1.57
VTA1Q9NP79 FKBP1BP1-201ENST00000553366 325 ntBASIC5.25□□□□□ -1.57
VTA1Q9NP79 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC5.25□□□□□ -1.57
VTA1Q9NP79 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.25□□□□□ -1.57
VTA1Q9NP79 AP001094.1-201ENST00000579805 193 ntBASIC5.25□□□□□ -1.57
VTA1Q9NP79 ZNF415P1-201ENST00000582279 1166 ntBASIC5.25□□□□□ -1.57
VTA1Q9NP79 ABBA01006766.1-201ENST00000584728 294 ntBASIC5.25□□□□□ -1.57
VTA1Q9NP79 AC078795.2-201ENST00000602835 1252 ntBASIC5.25□□□□□ -1.57
VTA1Q9NP79 HSPE1P14-201ENST00000605812 302 ntBASIC5.25□□□□□ -1.57
VTA1Q9NP79 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VTA1Q9NP79 MIR6716-201ENST00000613413 80 ntBASIC5.25□□□□□ -1.57
VTA1Q9NP79 AC015540.1-201ENST00000615828 501 ntBASIC5.25□□□□□ -1.57
VTA1Q9NP79 RNU6-156P-201ENST00000621869 107 ntBASIC5.25□□□□□ -1.57
VTA1Q9NP79 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.25□□□□□ -1.57
VTA1Q9NP79 OR52H1-202ENST00000641796 1061 ntBASIC5.25□□□□□ -1.57
VTA1Q9NP79 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.25□□□□□ -1.57
VTA1Q9NP79 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
VTA1Q9NP79 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VTA1Q9NP79 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VTA1Q9NP79 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VTA1Q9NP79 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.25□□□□□ -1.57
VTA1Q9NP79 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VTA1Q9NP79 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VTA1Q9NP79 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
VTA1Q9NP79 AC008079.2-201ENST00000623543 20396 ntBASIC5.24□□□□□ -1.57
VTA1Q9NP79 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.24□□□□□ -1.57
VTA1Q9NP79 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.24□□□□□ -1.57
VTA1Q9NP79 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VTA1Q9NP79 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.24□□□□□ -1.57
VTA1Q9NP79 ANKRD62P1-201ENST00000434304 1623 ntBASIC5.24□□□□□ -1.57
VTA1Q9NP79 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VTA1Q9NP79 AC021146.4-201ENST00000309229 279 ntBASIC5.24□□□□□ -1.57
VTA1Q9NP79 RNU4-44P-201ENST00000363050 141 ntBASIC5.24□□□□□ -1.57
VTA1Q9NP79 RNU5F-7P-201ENST00000363696 115 ntBASIC5.24□□□□□ -1.57
VTA1Q9NP79 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
VTA1Q9NP79 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.24□□□□□ -1.57
VTA1Q9NP79 MIR1305-201ENST00000408300 86 ntBASIC5.24□□□□□ -1.57
VTA1Q9NP79 RN7SKP266-201ENST00000410232 287 ntBASIC5.24□□□□□ -1.57
VTA1Q9NP79 RN7SKP56-201ENST00000410513 331 ntBASIC5.24□□□□□ -1.57
VTA1Q9NP79 OR8G2P-201ENST00000412796 908 ntBASIC5.24□□□□□ -1.57
VTA1Q9NP79 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC5.24□□□□□ -1.57
VTA1Q9NP79 NUP35P2-201ENST00000416748 943 ntBASIC5.24□□□□□ -1.57
VTA1Q9NP79 AL358176.3-201ENST00000420757 454 ntBASIC5.24□□□□□ -1.57
VTA1Q9NP79 AL356387.2-201ENST00000422272 243 ntBASIC5.24□□□□□ -1.57
VTA1Q9NP79 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC5.24□□□□□ -1.57
VTA1Q9NP79 RPL34P6-201ENST00000432390 345 ntBASIC5.24□□□□□ -1.57
VTA1Q9NP79 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC5.24□□□□□ -1.57
VTA1Q9NP79 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC5.24□□□□□ -1.57
VTA1Q9NP79 LARP1BP3-201ENST00000437229 869 ntBASIC5.24□□□□□ -1.57
VTA1Q9NP79 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.24□□□□□ -1.57
VTA1Q9NP79 MUPP-201ENST00000438111 566 ntBASIC5.24□□□□□ -1.57
VTA1Q9NP79 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC5.24□□□□□ -1.57
VTA1Q9NP79 DNAJC19P1-201ENST00000455312 319 ntBASIC5.24□□□□□ -1.57
VTA1Q9NP79 RPL23AP24-201ENST00000458203 385 ntBASIC5.24□□□□□ -1.57
VTA1Q9NP79 SCARNA10-201ENST00000459255 330 ntBASIC5.24□□□□□ -1.57
VTA1Q9NP79 AC091564.1-201ENST00000464563 479 ntBASIC5.24□□□□□ -1.57
VTA1Q9NP79 AC021660.1-201ENST00000465006 554 ntBASIC5.24□□□□□ -1.57
VTA1Q9NP79 RPL7P22-201ENST00000466005 733 ntBASIC5.24□□□□□ -1.57
VTA1Q9NP79 AC109327.1-201ENST00000471666 403 ntBASIC5.24□□□□□ -1.57
VTA1Q9NP79 AC106872.3-201ENST00000495104 446 ntBASIC5.24□□□□□ -1.57
VTA1Q9NP79 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC5.24□□□□□ -1.57
VTA1Q9NP79 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC5.24□□□□□ -1.57
VTA1Q9NP79 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC5.24□□□□□ -1.57
VTA1Q9NP79 CDC42P4-201ENST00000510507 563 ntBASIC5.24□□□□□ -1.57
VTA1Q9NP79 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VTA1Q9NP79 RNU6-150P-201ENST00000516237 95 ntBASIC5.24□□□□□ -1.57
VTA1Q9NP79 RNA5SP464-201ENST00000516251 108 ntBASIC5.24□□□□□ -1.57
VTA1Q9NP79 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.24□□□□□ -1.57
VTA1Q9NP79 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.24□□□□□ -1.57
VTA1Q9NP79 OR6C7P-201ENST00000547875 934 ntBASIC5.24□□□□□ -1.57
VTA1Q9NP79 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.24□□□□□ -1.57
VTA1Q9NP79 AC124068.1-201ENST00000563131 678 ntBASIC5.24□□□□□ -1.57
VTA1Q9NP79 RPL23AP92-201ENST00000603609 255 ntBASIC5.24□□□□□ -1.57
VTA1Q9NP79 AC090948.1-201ENST00000607464 549 ntBASIC5.24□□□□□ -1.57
VTA1Q9NP79 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VTA1Q9NP79 AC068831.8-201ENST00000620171 435 ntBASIC5.24□□□□□ -1.57
VTA1Q9NP79 U6.101-201ENST00000637707 76 ntBASIC5.24□□□□□ -1.57
VTA1Q9NP79 AC090971.4-201ENST00000560291 1800 ntBASIC5.24□□□□□ -1.57
VTA1Q9NP79 ELL2P4-201ENST00000446870 1376 ntBASIC5.24□□□□□ -1.57
VTA1Q9NP79 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms