Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 YWHAZP7-201ENST00000436906 631 ntBASIC4.2□□□□□ -1.74
BRF2Q9HAW0 AC127537.2-201ENST00000439258 465 ntBASIC4.2□□□□□ -1.74
BRF2Q9HAW0 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.2□□□□□ -1.74
BRF2Q9HAW0 RSL24D1P3-201ENST00000449255 495 ntBASIC4.2□□□□□ -1.74
BRF2Q9HAW0 RPL23AP35-201ENST00000451906 501 ntBASIC4.2□□□□□ -1.74
BRF2Q9HAW0 TRGVB-201ENST00000453257 471 ntBASIC4.2□□□□□ -1.74
BRF2Q9HAW0 USP9YP34-201ENST00000453983 808 ntBASIC4.2□□□□□ -1.74
BRF2Q9HAW0 FGF7P3-201ENST00000454645 303 ntBASIC4.2□□□□□ -1.74
BRF2Q9HAW0 snoU13.3-201ENST00000459441 104 ntBASIC4.2□□□□□ -1.74
BRF2Q9HAW0 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.2□□□□□ -1.74
BRF2Q9HAW0 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.2□□□□□ -1.74
BRF2Q9HAW0 SYPL1P1-201ENST00000473622 768 ntBASIC4.2□□□□□ -1.74
BRF2Q9HAW0 LINC00888-204ENST00000487386 421 ntBASIC4.2□□□□□ -1.74
BRF2Q9HAW0 FAM172BP-201ENST00000487497 1089 ntBASIC4.2□□□□□ -1.74
BRF2Q9HAW0 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.2□□□□□ -1.74
BRF2Q9HAW0 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.2□□□□□ -1.74
BRF2Q9HAW0 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
BRF2Q9HAW0 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.2□□□□□ -1.74
BRF2Q9HAW0 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.2□□□□□ -1.74
BRF2Q9HAW0 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.2□□□□□ -1.74
BRF2Q9HAW0 AL352979.3-201ENST00000553515 247 ntBASIC4.2□□□□□ -1.74
BRF2Q9HAW0 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.2□□□□□ -1.74
BRF2Q9HAW0 AC084783.1-201ENST00000565846 910 ntBASIC4.2□□□□□ -1.74
BRF2Q9HAW0 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
BRF2Q9HAW0 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.2□□□□□ -1.74
BRF2Q9HAW0 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
BRF2Q9HAW0 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.2□□□□□ -1.74
BRF2Q9HAW0 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.2□□□□□ -1.74
BRF2Q9HAW0 AC104785.1-201ENST00000603220 588 ntBASIC4.2□□□□□ -1.74
BRF2Q9HAW0 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.2□□□□□ -1.74
BRF2Q9HAW0 AL139418.1-201ENST00000613613 177 ntBASIC4.2□□□□□ -1.74
BRF2Q9HAW0 AL136981.2-201ENST00000617319 734 ntBASIC4.2□□□□□ -1.74
BRF2Q9HAW0 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
BRF2Q9HAW0 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.2□□□□□ -1.74
BRF2Q9HAW0 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.2□□□□□ -1.74
BRF2Q9HAW0 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
BRF2Q9HAW0 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
BRF2Q9HAW0 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
BRF2Q9HAW0 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.2□□□□□ -1.74
BRF2Q9HAW0 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
BRF2Q9HAW0 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.19□□□□□ -1.74
BRF2Q9HAW0 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
BRF2Q9HAW0 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
BRF2Q9HAW0 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
BRF2Q9HAW0 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.19□□□□□ -1.74
BRF2Q9HAW0 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.19□□□□□ -1.74
BRF2Q9HAW0 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
BRF2Q9HAW0 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
BRF2Q9HAW0 RNA5SP28-201ENST00000363841 119 ntBASIC4.19□□□□□ -1.74
BRF2Q9HAW0 RNVU1-6-201ENST00000364688 164 ntBASIC4.19□□□□□ -1.74
BRF2Q9HAW0 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
BRF2Q9HAW0 RPS3AP23-201ENST00000401762 784 ntBASIC4.19□□□□□ -1.74
BRF2Q9HAW0 RPL23AP48-201ENST00000406913 488 ntBASIC4.19□□□□□ -1.74
BRF2Q9HAW0 RN7SKP177-201ENST00000410567 355 ntBASIC4.19□□□□□ -1.74
BRF2Q9HAW0 AC107081.1-201ENST00000414975 361 ntBASIC4.19□□□□□ -1.74
BRF2Q9HAW0 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.19□□□□□ -1.74
BRF2Q9HAW0 RPS23P10-201ENST00000416185 486 ntBASIC4.19□□□□□ -1.74
BRF2Q9HAW0 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.19□□□□□ -1.74
BRF2Q9HAW0 PTP4A1P5-201ENST00000420305 455 ntBASIC4.19□□□□□ -1.74
BRF2Q9HAW0 RPL7AP25-201ENST00000423357 805 ntBASIC4.19□□□□□ -1.74
BRF2Q9HAW0 EIF1P3-201ENST00000423841 334 ntBASIC4.19□□□□□ -1.74
BRF2Q9HAW0 AC234781.2-201ENST00000426370 994 ntBASIC4.19□□□□□ -1.74
BRF2Q9HAW0 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.19□□□□□ -1.74
BRF2Q9HAW0 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.19□□□□□ -1.74
BRF2Q9HAW0 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.19□□□□□ -1.74
BRF2Q9HAW0 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.19□□□□□ -1.74
BRF2Q9HAW0 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.19□□□□□ -1.74
BRF2Q9HAW0 ARPC3P5-201ENST00000448802 534 ntBASIC4.19□□□□□ -1.74
BRF2Q9HAW0 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.19□□□□□ -1.74
BRF2Q9HAW0 USP9YP10-201ENST00000454868 628 ntBASIC4.19□□□□□ -1.74
BRF2Q9HAW0 DHFRP3-201ENST00000455595 559 ntBASIC4.19□□□□□ -1.74
BRF2Q9HAW0 HMGB3P30-201ENST00000457863 606 ntBASIC4.19□□□□□ -1.74
BRF2Q9HAW0 RPS3AP22-201ENST00000488297 769 ntBASIC4.19□□□□□ -1.74
BRF2Q9HAW0 AC231760.1-201ENST00000498002 260 ntBASIC4.19□□□□□ -1.74
BRF2Q9HAW0 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.19□□□□□ -1.74
BRF2Q9HAW0 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
BRF2Q9HAW0 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.19□□□□□ -1.74
BRF2Q9HAW0 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.19□□□□□ -1.74
BRF2Q9HAW0 ATP1B1P1-201ENST00000509767 915 ntBASIC4.19□□□□□ -1.74
BRF2Q9HAW0 AC006499.6-201ENST00000511169 607 ntBASIC4.19□□□□□ -1.74
BRF2Q9HAW0 USP9YP5-201ENST00000511770 630 ntBASIC4.19□□□□□ -1.74
BRF2Q9HAW0 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
BRF2Q9HAW0 IGLV3-26-201ENST00000520756 302 ntBASIC4.19□□□□□ -1.74
BRF2Q9HAW0 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.19□□□□□ -1.74
BRF2Q9HAW0 UBE2NP1-201ENST00000545592 458 ntBASIC4.19□□□□□ -1.74
BRF2Q9HAW0 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.19□□□□□ -1.74
BRF2Q9HAW0 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.19□□□□□ -1.74
BRF2Q9HAW0 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.19□□□□□ -1.74
BRF2Q9HAW0 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.19□□□□□ -1.74
BRF2Q9HAW0 AL133457.1-201ENST00000564251 987 ntBASIC4.19□□□□□ -1.74
BRF2Q9HAW0 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.19□□□□□ -1.74
BRF2Q9HAW0 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.19□□□□□ -1.74
BRF2Q9HAW0 LARP7P2-201ENST00000575306 125 ntBASIC4.19□□□□□ -1.74
BRF2Q9HAW0 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.19□□□□□ -1.74
BRF2Q9HAW0 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
BRF2Q9HAW0 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.19□□□□□ -1.74
BRF2Q9HAW0 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.19□□□□□ -1.74
BRF2Q9HAW0 AC112220.3-201ENST00000605502 502 ntBASIC4.19□□□□□ -1.74
BRF2Q9HAW0 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.19□□□□□ -1.74
BRF2Q9HAW0 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms