Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AL389895.1-201ENST00000554127 252 ntBASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 AC122134.1-201ENST00000565664 1104 ntBASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 AC090312.1-201ENST00000580637 348 ntBASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 BNIP3P22-201ENST00000593399 556 ntBASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 AC007687.1-201ENST00000602704 304 ntBASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 AC108738.1-201ENST00000603703 237 ntBASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 AC109309.2-201ENST00000612597 332 ntBASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 MIR8080-201ENST00000622224 89 ntBASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 AC100757.1-201ENST00000616872 1835 ntBASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 USP9YP4-201ENST00000424401 1745 ntBASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 AC133552.1-201ENST00000569988 4007 ntBASIC4.8□□□□□ -1.64
SEC61A2Q9H9S3 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 AC104260.2-201ENST00000623551 3497 ntBASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 RNU6-984P-201ENST00000363236 109 ntBASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 RN7SKP160-201ENST00000363804 340 ntBASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 SNORA69-201ENST00000383895 132 ntBASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 RNU1-77P-201ENST00000390868 162 ntBASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 HSPA8P15-201ENST00000401676 786 ntBASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 AC234781.4-201ENST00000419384 244 ntBASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 OR51AB1P-201ENST00000429046 620 ntBASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 AL365400.1-201ENST00000431854 640 ntBASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 GSTM5P1-201ENST00000434751 660 ntBASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 RPS26P40-201ENST00000435209 294 ntBASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 BNIP3P2-201ENST00000441221 577 ntBASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 HMGB3P9-201ENST00000441799 583 ntBASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 MTCYBP6-201ENST00000441810 138 ntBASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 CBWD4P-201ENST00000445695 655 ntBASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 RPL21P71-201ENST00000465598 459 ntBASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 AC083798.1-201ENST00000472671 131 ntBASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 SIAH1P1-201ENST00000479411 923 ntBASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 ENPP7P11-201ENST00000505915 627 ntBASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 RNU6-1045P-201ENST00000516321 107 ntBASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 SCARNA20.4-201ENST00000516969 131 ntBASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 RNU6-835P-201ENST00000516974 104 ntBASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 AC022616.6-201ENST00000520479 119 ntBASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 AC015720.2-201ENST00000567709 334 ntBASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 AC099489.2-201ENST00000574976 260 ntBASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 AC000068.2-201ENST00000608816 460 ntBASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 CDRT1-208ENST00000630868 794 ntBASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 AC010149.2-201ENST00000637608 315 ntBASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 THAP12P5-201ENST00000405864 2275 ntBASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms