Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC006077.1-201ENST00000604746 343 ntBASIC3.67□□□□□ -1.82
LRRC40Q9H9A6 AL451086.1-201ENST00000605596 223 ntBASIC3.67□□□□□ -1.82
LRRC40Q9H9A6 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.67□□□□□ -1.82
LRRC40Q9H9A6 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.67□□□□□ -1.82
LRRC40Q9H9A6 U6.98-201ENST00000637157 84 ntBASIC3.67□□□□□ -1.82
LRRC40Q9H9A6 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.67□□□□□ -1.82
LRRC40Q9H9A6 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LRRC40Q9H9A6 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LRRC40Q9H9A6 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LRRC40Q9H9A6 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LRRC40Q9H9A6 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
LRRC40Q9H9A6 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LRRC40Q9H9A6 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LRRC40Q9H9A6 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LRRC40Q9H9A6 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LRRC40Q9H9A6 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
LRRC40Q9H9A6 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.66□□□□□ -1.82
LRRC40Q9H9A6 RNA5SP235-201ENST00000365411 114 ntBASIC3.66□□□□□ -1.82
LRRC40Q9H9A6 MT-TC-201ENST00000387405 66 ntBASIC3.66□□□□□ -1.82
LRRC40Q9H9A6 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.66□□□□□ -1.82
LRRC40Q9H9A6 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LRRC40Q9H9A6 U3.39-201ENST00000408569 239 ntBASIC3.66□□□□□ -1.82
LRRC40Q9H9A6 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.66□□□□□ -1.82
LRRC40Q9H9A6 AC091390.1-201ENST00000433904 331 ntBASIC3.66□□□□□ -1.82
LRRC40Q9H9A6 HMGB1P12-201ENST00000438594 598 ntBASIC3.66□□□□□ -1.82
LRRC40Q9H9A6 AC074367.1-201ENST00000438685 1125 ntBASIC3.66□□□□□ -1.82
LRRC40Q9H9A6 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.66□□□□□ -1.82
LRRC40Q9H9A6 AC092170.1-201ENST00000440211 356 ntBASIC3.66□□□□□ -1.82
LRRC40Q9H9A6 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.66□□□□□ -1.82
LRRC40Q9H9A6 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.66□□□□□ -1.82
LRRC40Q9H9A6 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.66□□□□□ -1.82
LRRC40Q9H9A6 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.66□□□□□ -1.82
LRRC40Q9H9A6 RNU6-1073P-201ENST00000517182 106 ntBASIC3.66□□□□□ -1.82
LRRC40Q9H9A6 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.66□□□□□ -1.82
LRRC40Q9H9A6 RANP9-201ENST00000519957 271 ntBASIC3.66□□□□□ -1.82
LRRC40Q9H9A6 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.66□□□□□ -1.82
LRRC40Q9H9A6 AC007991.1-201ENST00000522680 631 ntBASIC3.66□□□□□ -1.82
LRRC40Q9H9A6 AP004371.1-201ENST00000525240 214 ntBASIC3.66□□□□□ -1.82
LRRC40Q9H9A6 SYF2P1-201ENST00000550658 413 ntBASIC3.66□□□□□ -1.82
LRRC40Q9H9A6 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.66□□□□□ -1.82
LRRC40Q9H9A6 AC119501.1-201ENST00000603646 475 ntBASIC3.66□□□□□ -1.82
LRRC40Q9H9A6 BNIP3P4-201ENST00000604946 565 ntBASIC3.66□□□□□ -1.82
LRRC40Q9H9A6 HSPE1P14-201ENST00000605812 302 ntBASIC3.66□□□□□ -1.82
LRRC40Q9H9A6 AC006023.2-201ENST00000609916 167 ntBASIC3.66□□□□□ -1.82
LRRC40Q9H9A6 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.66□□□□□ -1.82
LRRC40Q9H9A6 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.66□□□□□ -1.82
LRRC40Q9H9A6 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
LRRC40Q9H9A6 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.66□□□□□ -1.82
LRRC40Q9H9A6 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
LRRC40Q9H9A6 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LRRC40Q9H9A6 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
LRRC40Q9H9A6 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
LRRC40Q9H9A6 PRO1804-201ENST00000623780 2050 ntBASIC3.66□□□□□ -1.82
LRRC40Q9H9A6 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
LRRC40Q9H9A6 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LRRC40Q9H9A6 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
LRRC40Q9H9A6 AP001350.1-201ENST00000601906 1524 ntBASIC3.65□□□□□ -1.82
LRRC40Q9H9A6 AC007656.2-201ENST00000624902 4547 ntBASIC3.65□□□□□ -1.82
LRRC40Q9H9A6 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
LRRC40Q9H9A6 RNU6-1226P-201ENST00000384317 107 ntBASIC3.65□□□□□ -1.83
LRRC40Q9H9A6 AC009237.5-201ENST00000414271 501 ntBASIC3.65□□□□□ -1.83
LRRC40Q9H9A6 UBE2V1P9-201ENST00000414760 368 ntBASIC3.65□□□□□ -1.83
LRRC40Q9H9A6 AC007390.1-201ENST00000415722 356 ntBASIC3.65□□□□□ -1.83
LRRC40Q9H9A6 RPS3AP9-201ENST00000417027 792 ntBASIC3.65□□□□□ -1.83
LRRC40Q9H9A6 AC008280.1-201ENST00000418851 412 ntBASIC3.65□□□□□ -1.83
LRRC40Q9H9A6 SDCBPP2-201ENST00000424643 885 ntBASIC3.65□□□□□ -1.83
LRRC40Q9H9A6 RPL21P66-201ENST00000426566 466 ntBASIC3.65□□□□□ -1.83
LRRC40Q9H9A6 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.65□□□□□ -1.83
LRRC40Q9H9A6 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.65□□□□□ -1.83
LRRC40Q9H9A6 ELOCP13-201ENST00000443934 329 ntBASIC3.65□□□□□ -1.83
LRRC40Q9H9A6 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.65□□□□□ -1.83
LRRC40Q9H9A6 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LRRC40Q9H9A6 AC005726.1-201ENST00000494679 427 ntBASIC3.65□□□□□ -1.83
LRRC40Q9H9A6 AC026784.1-201ENST00000507986 352 ntBASIC3.65□□□□□ -1.83
LRRC40Q9H9A6 AC010468.3-201ENST00000508225 458 ntBASIC3.65□□□□□ -1.83
LRRC40Q9H9A6 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.65□□□□□ -1.83
LRRC40Q9H9A6 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.65□□□□□ -1.83
LRRC40Q9H9A6 RN7SKP116-201ENST00000516902 319 ntBASIC3.65□□□□□ -1.83
LRRC40Q9H9A6 SNORA76.2-201ENST00000517095 137 ntBASIC3.65□□□□□ -1.83
LRRC40Q9H9A6 HIGD1AP6-201ENST00000521833 279 ntBASIC3.65□□□□□ -1.83
LRRC40Q9H9A6 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.65□□□□□ -1.83
LRRC40Q9H9A6 AC092470.1-201ENST00000546187 132 ntBASIC3.65□□□□□ -1.83
LRRC40Q9H9A6 AC004217.3-201ENST00000551552 878 ntBASIC3.65□□□□□ -1.83
LRRC40Q9H9A6 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.65□□□□□ -1.83
LRRC40Q9H9A6 AC106734.1-201ENST00000568646 663 ntBASIC3.65□□□□□ -1.83
LRRC40Q9H9A6 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.65□□□□□ -1.83
LRRC40Q9H9A6 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.65□□□□□ -1.83
LRRC40Q9H9A6 VN1R85P-201ENST00000601587 426 ntBASIC3.65□□□□□ -1.83
LRRC40Q9H9A6 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.65□□□□□ -1.83
LRRC40Q9H9A6 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.65□□□□□ -1.83
LRRC40Q9H9A6 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.65□□□□□ -1.83
LRRC40Q9H9A6 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LRRC40Q9H9A6 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.65□□□□□ -1.83
LRRC40Q9H9A6 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LRRC40Q9H9A6 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LRRC40Q9H9A6 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms