Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 AL356276.2-201ENST00000435919 558 ntBASIC3.78□□□□□ -1.8
UBQLN3Q9H347 TPTE2P3-201ENST00000441562 1189 ntBASIC3.78□□□□□ -1.8
UBQLN3Q9H347 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC3.78□□□□□ -1.8
UBQLN3Q9H347 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.78□□□□□ -1.8
UBQLN3Q9H347 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.78□□□□□ -1.8
UBQLN3Q9H347 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
UBQLN3Q9H347 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.78□□□□□ -1.8
UBQLN3Q9H347 AF213884.1-201ENST00000488102 463 ntBASIC3.78□□□□□ -1.8
UBQLN3Q9H347 RN7SL604P-201ENST00000492589 296 ntBASIC3.78□□□□□ -1.8
UBQLN3Q9H347 AC113347.3-201ENST00000509113 148 ntBASIC3.78□□□□□ -1.8
UBQLN3Q9H347 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.78□□□□□ -1.8
UBQLN3Q9H347 AC023141.12-201ENST00000512399 199 ntBASIC3.78□□□□□ -1.8
UBQLN3Q9H347 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.78□□□□□ -1.8
UBQLN3Q9H347 AC005798.1-201ENST00000513715 387 ntBASIC3.78□□□□□ -1.8
UBQLN3Q9H347 AC104057.1-201ENST00000515547 497 ntBASIC3.78□□□□□ -1.8
UBQLN3Q9H347 IGKV2-38-201ENST00000517443 247 ntBASIC3.78□□□□□ -1.8
UBQLN3Q9H347 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.78□□□□□ -1.8
UBQLN3Q9H347 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.78□□□□□ -1.8
UBQLN3Q9H347 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.78□□□□□ -1.8
UBQLN3Q9H347 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.78□□□□□ -1.8
UBQLN3Q9H347 LSM6P2-201ENST00000552208 177 ntBASIC3.78□□□□□ -1.8
UBQLN3Q9H347 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.78□□□□□ -1.8
UBQLN3Q9H347 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.78□□□□□ -1.8
UBQLN3Q9H347 MTND1P8-201ENST00000571424 950 ntBASIC3.78□□□□□ -1.8
UBQLN3Q9H347 AC022655.2-201ENST00000577280 318 ntBASIC3.78□□□□□ -1.8
UBQLN3Q9H347 AC006270.2-201ENST00000578523 652 ntBASIC3.78□□□□□ -1.8
UBQLN3Q9H347 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.78□□□□□ -1.8
UBQLN3Q9H347 OR4G1P-201ENST00000588632 938 ntBASIC3.78□□□□□ -1.8
UBQLN3Q9H347 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.78□□□□□ -1.8
UBQLN3Q9H347 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.78□□□□□ -1.8
UBQLN3Q9H347 RPP40P2-201ENST00000603596 712 ntBASIC3.78□□□□□ -1.8
UBQLN3Q9H347 AC112230.1-201ENST00000604342 547 ntBASIC3.78□□□□□ -1.8
UBQLN3Q9H347 AL049634.3-201ENST00000604968 457 ntBASIC3.78□□□□□ -1.8
UBQLN3Q9H347 HMGN2P28-201ENST00000606102 262 ntBASIC3.78□□□□□ -1.8
UBQLN3Q9H347 AC092954.1-201ENST00000609121 445 ntBASIC3.78□□□□□ -1.8
UBQLN3Q9H347 AL138478.1-201ENST00000612252 832 ntBASIC3.78□□□□□ -1.8
UBQLN3Q9H347 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.78□□□□□ -1.8
UBQLN3Q9H347 AL121895.2-201ENST00000619558 447 ntBASIC3.78□□□□□ -1.8
UBQLN3Q9H347 AF001550.2-201ENST00000636643 217 ntBASIC3.78□□□□□ -1.8
UBQLN3Q9H347 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
UBQLN3Q9H347 AC117529.2-201ENST00000512159 2068 ntBASIC3.78□□□□□ -1.8
UBQLN3Q9H347 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
UBQLN3Q9H347 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
UBQLN3Q9H347 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.77□□□□□ -1.81
UBQLN3Q9H347 AL355578.1-201ENST00000607405 1328 ntBASIC3.77□□□□□ -1.81
UBQLN3Q9H347 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
UBQLN3Q9H347 RNA5SP130-201ENST00000364431 114 ntBASIC3.77□□□□□ -1.81
UBQLN3Q9H347 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
UBQLN3Q9H347 MIR3074-201ENST00000384885 81 ntBASIC3.77□□□□□ -1.81
UBQLN3Q9H347 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
UBQLN3Q9H347 SNORA40.2-201ENST00000390847 128 ntBASIC3.77□□□□□ -1.81
UBQLN3Q9H347 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
UBQLN3Q9H347 RN7SKP263-201ENST00000411194 309 ntBASIC3.77□□□□□ -1.81
UBQLN3Q9H347 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.77□□□□□ -1.81
UBQLN3Q9H347 AC092647.1-201ENST00000420654 287 ntBASIC3.77□□□□□ -1.81
UBQLN3Q9H347 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.77□□□□□ -1.81
UBQLN3Q9H347 GTF2IP23-201ENST00000423746 351 ntBASIC3.77□□□□□ -1.81
UBQLN3Q9H347 AC092648.1-201ENST00000425870 423 ntBASIC3.77□□□□□ -1.81
UBQLN3Q9H347 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.77□□□□□ -1.81
UBQLN3Q9H347 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
UBQLN3Q9H347 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.77□□□□□ -1.81
UBQLN3Q9H347 GTF2IP7-202ENST00000436677 309 ntBASIC3.77□□□□□ -1.81
UBQLN3Q9H347 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.77□□□□□ -1.81
UBQLN3Q9H347 RRM2P4-201ENST00000441721 562 ntBASIC3.77□□□□□ -1.81
UBQLN3Q9H347 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
UBQLN3Q9H347 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.77□□□□□ -1.81
UBQLN3Q9H347 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.77□□□□□ -1.81
UBQLN3Q9H347 AC092155.2-201ENST00000454675 477 ntBASIC3.77□□□□□ -1.81
UBQLN3Q9H347 PTGES3P5-201ENST00000455109 434 ntBASIC3.77□□□□□ -1.81
UBQLN3Q9H347 AC010301.1-201ENST00000473936 355 ntBASIC3.77□□□□□ -1.81
UBQLN3Q9H347 AC092045.1-201ENST00000495716 1231 ntBASIC3.77□□□□□ -1.81
UBQLN3Q9H347 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.77□□□□□ -1.81
UBQLN3Q9H347 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.77□□□□□ -1.81
UBQLN3Q9H347 BOLA3P3-201ENST00000505182 232 ntBASIC3.77□□□□□ -1.81
UBQLN3Q9H347 AC020593.1-201ENST00000507399 299 ntBASIC3.77□□□□□ -1.81
UBQLN3Q9H347 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.77□□□□□ -1.81
UBQLN3Q9H347 RNA5SP309-201ENST00000516670 106 ntBASIC3.77□□□□□ -1.81
UBQLN3Q9H347 SNORA48.10-201ENST00000516965 160 ntBASIC3.77□□□□□ -1.81
UBQLN3Q9H347 AP001189.2-201ENST00000527320 189 ntBASIC3.77□□□□□ -1.81
UBQLN3Q9H347 AP000790.1-201ENST00000528891 737 ntBASIC3.77□□□□□ -1.81
UBQLN3Q9H347 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.77□□□□□ -1.81
UBQLN3Q9H347 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.77□□□□□ -1.81
UBQLN3Q9H347 CBX3P5-201ENST00000552017 521 ntBASIC3.77□□□□□ -1.81
UBQLN3Q9H347 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.77□□□□□ -1.81
UBQLN3Q9H347 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.77□□□□□ -1.81
UBQLN3Q9H347 AC090616.5-202ENST00000582111 297 ntBASIC3.77□□□□□ -1.81
UBQLN3Q9H347 AC015688.2-201ENST00000584523 262 ntBASIC3.77□□□□□ -1.81
UBQLN3Q9H347 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.77□□□□□ -1.81
UBQLN3Q9H347 AC068722.2-201ENST00000618734 544 ntBASIC3.77□□□□□ -1.81
UBQLN3Q9H347 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.77□□□□□ -1.81
UBQLN3Q9H347 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.77□□□□□ -1.81
UBQLN3Q9H347 AC112484.5-201ENST00000624189 228 ntBASIC3.77□□□□□ -1.81
UBQLN3Q9H347 AP005264.7-201ENST00000625003 745 ntBASIC3.77□□□□□ -1.81
UBQLN3Q9H347 LINC02211-204ENST00000642024 1070 ntBASIC3.77□□□□□ -1.81
UBQLN3Q9H347 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
UBQLN3Q9H347 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.77□□□□□ -1.81
UBQLN3Q9H347 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
UBQLN3Q9H347 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.77□□□□□ -1.81
UBQLN3Q9H347 AC090337.1-201ENST00000579651 2074 ntBASIC3.77□□□□□ -1.81
UBQLN3Q9H347 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms