Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.99□□□□□ -1.77
CCSER1Q9C0I3 AC023598.1-201ENST00000472521 361 ntBASIC3.99□□□□□ -1.77
CCSER1Q9C0I3 AC025768.1-201ENST00000510057 267 ntBASIC3.99□□□□□ -1.77
CCSER1Q9C0I3 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.99□□□□□ -1.77
CCSER1Q9C0I3 SNORA70.14-201ENST00000516205 110 ntBASIC3.99□□□□□ -1.77
CCSER1Q9C0I3 HMGB1P1-201ENST00000522557 636 ntBASIC3.99□□□□□ -1.77
CCSER1Q9C0I3 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.99□□□□□ -1.77
CCSER1Q9C0I3 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.99□□□□□ -1.77
CCSER1Q9C0I3 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.99□□□□□ -1.77
CCSER1Q9C0I3 DUXAP6-201ENST00000553858 601 ntBASIC3.99□□□□□ -1.77
CCSER1Q9C0I3 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.99□□□□□ -1.77
CCSER1Q9C0I3 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.99□□□□□ -1.77
CCSER1Q9C0I3 MIR4429-201ENST00000580105 73 ntBASIC3.99□□□□□ -1.77
CCSER1Q9C0I3 VN1R88P-201ENST00000596787 292 ntBASIC3.99□□□□□ -1.77
CCSER1Q9C0I3 AC112503.2-201ENST00000609005 552 ntBASIC3.99□□□□□ -1.77
CCSER1Q9C0I3 AC096586.1-201ENST00000610267 561 ntBASIC3.99□□□□□ -1.77
CCSER1Q9C0I3 AL163051.2-201ENST00000618976 735 ntBASIC3.99□□□□□ -1.77
CCSER1Q9C0I3 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
CCSER1Q9C0I3 AC112200.1-201ENST00000625015 234 ntBASIC3.99□□□□□ -1.77
CCSER1Q9C0I3 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCSER1Q9C0I3 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCSER1Q9C0I3 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.99□□□□□ -1.77
CCSER1Q9C0I3 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCSER1Q9C0I3 MTCO1P6-201ENST00000481192 1384 ntBASIC3.99□□□□□ -1.77
CCSER1Q9C0I3 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCSER1Q9C0I3 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCSER1Q9C0I3 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCSER1Q9C0I3 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.99□□□□□ -1.77
CCSER1Q9C0I3 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCSER1Q9C0I3 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCSER1Q9C0I3 RPS4XP5-202ENST00000449995 1334 ntBASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 MTND5P28-201ENST00000438005 1594 ntBASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 MIR449B-201ENST00000384995 97 ntBASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 EIF5P1-201ENST00000400019 1231 ntBASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 AL136116.1-201ENST00000403591 381 ntBASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 ATF1P1-201ENST00000406040 927 ntBASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 RHEBP3-201ENST00000411920 351 ntBASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 AC019070.1-201ENST00000415008 1024 ntBASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 AC127526.1-201ENST00000417526 366 ntBASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 AC068533.1-201ENST00000418542 415 ntBASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 AL138799.3-201ENST00000438968 350 ntBASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 AC004865.1-201ENST00000442276 1003 ntBASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 RPL23AP15-201ENST00000450202 459 ntBASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 SNORD105B-201ENST00000458770 79 ntBASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 RPL7P47-201ENST00000497299 556 ntBASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 MTND3P24-201ENST00000506306 329 ntBASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 HMGN1P11-201ENST00000508668 303 ntBASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 PCBP2P3-201ENST00000509726 843 ntBASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 RNU6-488P-201ENST00000515918 99 ntBASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 RNU2-58P-201ENST00000516403 183 ntBASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 SNORA70.18-201ENST00000516696 98 ntBASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 RNU4-60P-201ENST00000517239 135 ntBASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 AP003717.3-201ENST00000544832 1180 ntBASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 GTF2IP22-201ENST00000554443 182 ntBASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 AC079148.1-201ENST00000565944 819 ntBASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 AC017100.2-201ENST00000584628 355 ntBASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 BNIP3P38-201ENST00000601117 544 ntBASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 AC245100.7-201ENST00000609678 442 ntBASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 AC020923.1-201ENST00000624021 917 ntBASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 AL109659.3-201ENST00000624985 950 ntBASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.98□□□□□ -1.77
CCSER1Q9C0I3 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.97□□□□□ -1.77
CCSER1Q9C0I3 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.97□□□□□ -1.77
CCSER1Q9C0I3 MFSD8-213ENST00000641134 1327 ntBASIC3.97□□□□□ -1.77
CCSER1Q9C0I3 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCSER1Q9C0I3 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCSER1Q9C0I3 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.97□□□□□ -1.77
CCSER1Q9C0I3 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.97□□□□□ -1.77
CCSER1Q9C0I3 AC058791.1-201ENST00000608412 3198 ntBASIC3.97□□□□□ -1.77
CCSER1Q9C0I3 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCSER1Q9C0I3 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
CCSER1Q9C0I3 MIR423-201ENST00000362201 94 ntBASIC3.97□□□□□ -1.77
CCSER1Q9C0I3 RNU6-792P-201ENST00000363490 107 ntBASIC3.97□□□□□ -1.77
CCSER1Q9C0I3 AL359837.1-201ENST00000381357 287 ntBASIC3.97□□□□□ -1.77
CCSER1Q9C0I3 RNU6-1005P-201ENST00000384519 107 ntBASIC3.97□□□□□ -1.77
CCSER1Q9C0I3 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CCSER1Q9C0I3 RNU6-272P-201ENST00000411028 104 ntBASIC3.97□□□□□ -1.77
CCSER1Q9C0I3 AC069218.2-201ENST00000411665 344 ntBASIC3.97□□□□□ -1.77
CCSER1Q9C0I3 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.97□□□□□ -1.77
CCSER1Q9C0I3 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.97□□□□□ -1.77
CCSER1Q9C0I3 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.97□□□□□ -1.77
CCSER1Q9C0I3 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.97□□□□□ -1.77
CCSER1Q9C0I3 AL357078.2-201ENST00000416486 427 ntBASIC3.97□□□□□ -1.77
CCSER1Q9C0I3 DBIP2-201ENST00000419076 262 ntBASIC3.97□□□□□ -1.77
CCSER1Q9C0I3 AL606495.1-201ENST00000422100 813 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms