Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.81□□□□□ -1.8
CCM2Q9BSQ5 Vault.1-201ENST00000516474 102 ntBASIC3.81□□□□□ -1.8
CCM2Q9BSQ5 AC023632.1-201ENST00000518463 375 ntBASIC3.81□□□□□ -1.8
CCM2Q9BSQ5 SOD1P3-201ENST00000518682 454 ntBASIC3.81□□□□□ -1.8
CCM2Q9BSQ5 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.81□□□□□ -1.8
CCM2Q9BSQ5 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCM2Q9BSQ5 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.81□□□□□ -1.8
CCM2Q9BSQ5 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCM2Q9BSQ5 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.81□□□□□ -1.8
CCM2Q9BSQ5 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.81□□□□□ -1.8
CCM2Q9BSQ5 EIF5A2P1-201ENST00000564027 460 ntBASIC3.81□□□□□ -1.8
CCM2Q9BSQ5 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.81□□□□□ -1.8
CCM2Q9BSQ5 AC067852.4-201ENST00000590314 478 ntBASIC3.81□□□□□ -1.8
CCM2Q9BSQ5 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.81□□□□□ -1.8
CCM2Q9BSQ5 AC010680.4-201ENST00000605334 543 ntBASIC3.81□□□□□ -1.8
CCM2Q9BSQ5 AC113194.1-201ENST00000606037 500 ntBASIC3.81□□□□□ -1.8
CCM2Q9BSQ5 AC016597.2-201ENST00000613256 341 ntBASIC3.81□□□□□ -1.8
CCM2Q9BSQ5 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.81□□□□□ -1.8
CCM2Q9BSQ5 AF001550.2-201ENST00000636643 217 ntBASIC3.81□□□□□ -1.8
CCM2Q9BSQ5 ZNF663P-202ENST00000641770 1131 ntBASIC3.81□□□□□ -1.8
CCM2Q9BSQ5 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.81□□□□□ -1.8
CCM2Q9BSQ5 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CCM2Q9BSQ5 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.81□□□□□ -1.8
CCM2Q9BSQ5 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCM2Q9BSQ5 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.81□□□□□ -1.8
CCM2Q9BSQ5 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCM2Q9BSQ5 AC107081.3-201ENST00000612715 2034 ntBASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 BDP1P-201ENST00000582658 1990 ntBASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 RNA5SP322-201ENST00000363617 119 ntBASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 RNU1-64P-201ENST00000365443 163 ntBASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 RNA5SP167-201ENST00000365461 116 ntBASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 RNU6-575P-201ENST00000411326 105 ntBASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 RPS7P9-201ENST00000414704 586 ntBASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 NUP35P2-201ENST00000416748 943 ntBASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 NPM1P34-201ENST00000428821 893 ntBASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 AL513175.1-201ENST00000431492 780 ntBASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 RPL23AP62-201ENST00000463396 453 ntBASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 AC104164.3-201ENST00000467363 1258 ntBASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 AC007537.2-201ENST00000472093 511 ntBASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 RN7SL323P-201ENST00000494712 295 ntBASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 HMGB1P21-201ENST00000502313 581 ntBASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 TPT1P8-201ENST00000510120 555 ntBASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 NPM1P41-201ENST00000512920 831 ntBASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 IGKV2-23-201ENST00000518729 323 ntBASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 MTCO3P15-201ENST00000526563 574 ntBASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 PTP4A1P6-201ENST00000531034 478 ntBASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 RN7SL703P-201ENST00000578485 302 ntBASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 MIR5685-201ENST00000579080 79 ntBASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 AC091057.3-201ENST00000602684 733 ntBASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 AL445435.1-201ENST00000604232 665 ntBASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 AP003485.1-201ENST00000625093 753 ntBASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 FAM35DP-201ENST00000323387 2712 ntBASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCM2Q9BSQ5 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 DCAF13P3-201ENST00000561147 1334 ntBASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 TMSB4XP8-201ENST00000402089 135 ntBASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 RN7SKP56-201ENST00000410513 331 ntBASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 VN1R51P-201ENST00000411675 945 ntBASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 TMSB4XP6-201ENST00000415187 135 ntBASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 TMSB4XP1-201ENST00000424567 135 ntBASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 OSTCP5-201ENST00000425293 453 ntBASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 C1DP1-201ENST00000426049 402 ntBASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 MTCYBP32-201ENST00000427945 1084 ntBASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 HMGB3P5-201ENST00000428894 612 ntBASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 RPL36P19-201ENST00000430744 301 ntBASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 ATP5HP2-201ENST00000433885 485 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms