Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.83□□□□□ -1.64
IFT140Q96RY7 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
IFT140Q96RY7 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
IFT140Q96RY7 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
IFT140Q96RY7 AC022031.1-201ENST00000585985 2593 ntBASIC4.82□□□□□ -1.64
IFT140Q96RY7 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
IFT140Q96RY7 AL139039.1-201ENST00000401900 692 ntBASIC4.82□□□□□ -1.64
IFT140Q96RY7 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.82□□□□□ -1.64
IFT140Q96RY7 DUTP6-201ENST00000425573 462 ntBASIC4.82□□□□□ -1.64
IFT140Q96RY7 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.82□□□□□ -1.64
IFT140Q96RY7 AL136097.1-201ENST00000456945 913 ntBASIC4.82□□□□□ -1.64
IFT140Q96RY7 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.82□□□□□ -1.64
IFT140Q96RY7 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.82□□□□□ -1.64
IFT140Q96RY7 Y_RNA.676-201ENST00000516393 96 ntBASIC4.82□□□□□ -1.64
IFT140Q96RY7 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
IFT140Q96RY7 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.82□□□□□ -1.64
IFT140Q96RY7 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.82□□□□□ -1.64
IFT140Q96RY7 AL158196.1-201ENST00000616786 434 ntBASIC4.82□□□□□ -1.64
IFT140Q96RY7 TTC39DP-201ENST00000416781 1688 ntBASIC4.82□□□□□ -1.64
IFT140Q96RY7 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.82□□□□□ -1.64
IFT140Q96RY7 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
IFT140Q96RY7 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
IFT140Q96RY7 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
IFT140Q96RY7 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
IFT140Q96RY7 RNA5SP68-201ENST00000363885 119 ntBASIC4.81□□□□□ -1.64
IFT140Q96RY7 MIR764-201ENST00000390811 85 ntBASIC4.81□□□□□ -1.64
IFT140Q96RY7 ATP5F1P5-201ENST00000526403 760 ntBASIC4.81□□□□□ -1.64
IFT140Q96RY7 CYP2C60P-201ENST00000566088 139 ntBASIC4.81□□□□□ -1.64
IFT140Q96RY7 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.81□□□□□ -1.64
IFT140Q96RY7 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
IFT140Q96RY7 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
IFT140Q96RY7 MAPK10-362ENST00000641864 4484 ntBASIC4.81□□□□□ -1.64
IFT140Q96RY7 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
IFT140Q96RY7 U8.2-201ENST00000363156 134 ntBASIC4.81□□□□□ -1.64
IFT140Q96RY7 RNU1-112P-201ENST00000364401 164 ntBASIC4.81□□□□□ -1.64
IFT140Q96RY7 HMGB1P16-201ENST00000447155 540 ntBASIC4.81□□□□□ -1.64
IFT140Q96RY7 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.81□□□□□ -1.64
IFT140Q96RY7 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.81□□□□□ -1.64
IFT140Q96RY7 AP001646.1-201ENST00000527936 915 ntBASIC4.81□□□□□ -1.64
IFT140Q96RY7 AC016590.3-201ENST00000611171 753 ntBASIC4.81□□□□□ -1.64
IFT140Q96RY7 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
IFT140Q96RY7 AC007496.3-201ENST00000624987 3443 ntBASIC4.8□□□□□ -1.64
IFT140Q96RY7 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.8□□□□□ -1.64
IFT140Q96RY7 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
IFT140Q96RY7 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
IFT140Q96RY7 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
IFT140Q96RY7 AL138827.1-201ENST00000402666 306 ntBASIC4.8□□□□□ -1.64
IFT140Q96RY7 HMGB1P18-201ENST00000438801 619 ntBASIC4.8□□□□□ -1.64
IFT140Q96RY7 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.8□□□□□ -1.64
IFT140Q96RY7 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC4.8□□□□□ -1.64
IFT140Q96RY7 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.8□□□□□ -1.64
IFT140Q96RY7 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.8□□□□□ -1.64
IFT140Q96RY7 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.8□□□□□ -1.64
IFT140Q96RY7 AC090312.2-201ENST00000582687 378 ntBASIC4.8□□□□□ -1.64
IFT140Q96RY7 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.8□□□□□ -1.64
IFT140Q96RY7 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC4.79□□□□□ -1.64
IFT140Q96RY7 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
IFT140Q96RY7 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
IFT140Q96RY7 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
IFT140Q96RY7 AL592494.2-201ENST00000425455 1548 ntBASIC4.79□□□□□ -1.64
IFT140Q96RY7 AC005189.1-201ENST00000431286 310 ntBASIC4.79□□□□□ -1.64
IFT140Q96RY7 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.79□□□□□ -1.64
IFT140Q96RY7 RPS29P21-201ENST00000496272 170 ntBASIC4.79□□□□□ -1.64
IFT140Q96RY7 AC008837.1-201ENST00000511513 412 ntBASIC4.79□□□□□ -1.64
IFT140Q96RY7 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.79□□□□□ -1.64
IFT140Q96RY7 SERPINE4P-201ENST00000554978 281 ntBASIC4.79□□□□□ -1.64
IFT140Q96RY7 AL359715.5-201ENST00000623431 443 ntBASIC4.79□□□□□ -1.64
IFT140Q96RY7 AC244205.2-202ENST00000635781 342 ntBASIC4.79□□□□□ -1.64
IFT140Q96RY7 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC4.79□□□□□ -1.64
IFT140Q96RY7 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.79□□□□□ -1.64
IFT140Q96RY7 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
IFT140Q96RY7 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.79□□□□□ -1.64
IFT140Q96RY7 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
IFT140Q96RY7 AP006437.1-201ENST00000641440 3685 ntBASIC4.78□□□□□ -1.64
IFT140Q96RY7 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
IFT140Q96RY7 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.78□□□□□ -1.64
IFT140Q96RY7 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.78□□□□□ -1.64
IFT140Q96RY7 RAB6C-AS1-202ENST00000433431 123 ntBASIC4.78□□□□□ -1.64
IFT140Q96RY7 RPL29P29-201ENST00000448725 423 ntBASIC4.78□□□□□ -1.64
IFT140Q96RY7 RPL23AP23-201ENST00000452590 471 ntBASIC4.78□□□□□ -1.64
IFT140Q96RY7 AP001025.2-201ENST00000490908 477 ntBASIC4.78□□□□□ -1.64
IFT140Q96RY7 AP003122.3-201ENST00000526316 255 ntBASIC4.78□□□□□ -1.64
IFT140Q96RY7 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
IFT140Q96RY7 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
IFT140Q96RY7 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
IFT140Q96RY7 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
IFT140Q96RY7 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
IFT140Q96RY7 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
IFT140Q96RY7 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
IFT140Q96RY7 RPL7P26-201ENST00000333817 754 ntBASIC4.77□□□□□ -1.65
IFT140Q96RY7 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.77□□□□□ -1.65
IFT140Q96RY7 MTCO3P16-201ENST00000454456 754 ntBASIC4.77□□□□□ -1.65
IFT140Q96RY7 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.77□□□□□ -1.65
IFT140Q96RY7 LINC00901.1-201ENST00000617252 152 ntBASIC4.77□□□□□ -1.65
IFT140Q96RY7 AC022509.4-201ENST00000621404 572 ntBASIC4.77□□□□□ -1.65
IFT140Q96RY7 AC073476.4-201ENST00000628409 72 ntBASIC4.77□□□□□ -1.65
IFT140Q96RY7 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
IFT140Q96RY7 AC134882.1-201ENST00000603738 1676 ntBASIC4.76□□□□□ -1.65
IFT140Q96RY7 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.76□□□□□ -1.65
IFT140Q96RY7 AC009963.1-201ENST00000417265 157 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms