Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC011611.1-201ENST00000552179 197 ntBASIC5.2□□□□□ -1.58
PTCHD1Q96NR3 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC5.2□□□□□ -1.58
PTCHD1Q96NR3 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.2□□□□□ -1.58
PTCHD1Q96NR3 HMGB1P6-201ENST00000569046 646 ntBASIC5.2□□□□□ -1.58
PTCHD1Q96NR3 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC5.2□□□□□ -1.58
PTCHD1Q96NR3 AC243960.4-201ENST00000600532 288 ntBASIC5.2□□□□□ -1.58
PTCHD1Q96NR3 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.2□□□□□ -1.58
PTCHD1Q96NR3 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PTCHD1Q96NR3 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.2□□□□□ -1.58
PTCHD1Q96NR3 Y_RNA.812-201ENST00000610788 101 ntBASIC5.2□□□□□ -1.58
PTCHD1Q96NR3 Y_RNA.784-201ENST00000613803 101 ntBASIC5.2□□□□□ -1.58
PTCHD1Q96NR3 AL118522.2-201ENST00000616045 615 ntBASIC5.2□□□□□ -1.58
PTCHD1Q96NR3 Y_RNA.787-201ENST00000616522 101 ntBASIC5.2□□□□□ -1.58
PTCHD1Q96NR3 Y_RNA.780-201ENST00000617336 101 ntBASIC5.2□□□□□ -1.58
PTCHD1Q96NR3 Y_RNA.801-201ENST00000619005 101 ntBASIC5.2□□□□□ -1.58
PTCHD1Q96NR3 USP12-203ENST00000620323 349 ntTSL 3 BASIC5.2□□□□□ -1.58
PTCHD1Q96NR3 AC005858.4-201ENST00000623191 700 ntBASIC5.2□□□□□ -1.58
PTCHD1Q96NR3 CR381572.1-201ENST00000625098 102 ntBASIC5.2□□□□□ -1.58
PTCHD1Q96NR3 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC5.2□□□□□ -1.58
PTCHD1Q96NR3 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC5.2□□□□□ -1.58
PTCHD1Q96NR3 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PTCHD1Q96NR3 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.2□□□□□ -1.58
PTCHD1Q96NR3 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
PTCHD1Q96NR3 LINC01963-201ENST00000562038 3148 ntBASIC5.2□□□□□ -1.58
PTCHD1Q96NR3 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
PTCHD1Q96NR3 AC004158.1-201ENST00000564508 4319 ntBASIC5.2□□□□□ -1.58
PTCHD1Q96NR3 ATP8A2P2-201ENST00000437678 1568 ntBASIC5.2□□□□□ -1.58
PTCHD1Q96NR3 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
PTCHD1Q96NR3 AC114546.3-201ENST00000623582 1734 ntBASIC5.2□□□□□ -1.58
PTCHD1Q96NR3 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PTCHD1Q96NR3 AC105074.1-201ENST00000623380 3095 ntBASIC5.2□□□□□ -1.58
PTCHD1Q96NR3 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PTCHD1Q96NR3 AC006484.1-201ENST00000435086 1884 ntBASIC5.2□□□□□ -1.58
PTCHD1Q96NR3 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.2□□□□□ -1.58
PTCHD1Q96NR3 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 AL022311.1-201ENST00000623726 19416 ntBASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 Y_RNA.58-201ENST00000362807 102 ntBASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 SNORA51.1-201ENST00000363243 140 ntBASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 Y_RNA.154-201ENST00000363624 102 ntBASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 RNY3P1-201ENST00000365085 102 ntBASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 RNY3-201ENST00000365484 102 ntBASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 Y_RNA.490-201ENST00000384413 102 ntBASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 RPL31P52-201ENST00000407532 367 ntBASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 AC007161.1-204ENST00000423039 460 ntBASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 RBMY2QP-201ENST00000429799 1147 ntBASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 ATP5JP1-201ENST00000431631 322 ntBASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 RPL7P12-201ENST00000446719 750 ntBASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 SNORD125-201ENST00000459538 96 ntBASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 AC087879.1-201ENST00000474343 374 ntBASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 RN7SL583P-201ENST00000475692 287 ntBASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 RN7SL184P-201ENST00000488308 297 ntBASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 AC108693.1-201ENST00000496068 432 ntBASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 AC090572.1-201ENST00000519251 160 ntBASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 OR5B19P-201ENST00000531766 928 ntBASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 BX323046.1-201ENST00000610145 535 ntBASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 AC233309.1-201ENST00000619522 751 ntBASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 MIR8080-201ENST00000622224 89 ntBASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PTCHD1Q96NR3 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTCHD1Q96NR3 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms