Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AHI1-208ENST00000488690 712 ntTSL 5 BASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 ARL4AP1-201ENST00000503220 705 ntBASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 SNX5P1-201ENST00000505757 1041 ntBASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 AC018797.3-201ENST00000513388 1241 ntBASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 Y_RNA.655-201ENST00000515919 96 ntBASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 AC239860.2-201ENST00000525886 270 ntBASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 GSTP1P1-201ENST00000548078 319 ntBASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 AL389895.1-201ENST00000554127 252 ntBASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 AC124068.1-201ENST00000563131 678 ntBASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 RPL7P50-201ENST00000600588 727 ntBASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 AC004987.4-201ENST00000603383 338 ntBASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 MTCYBP22-201ENST00000603788 447 ntBASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 AP003117.2-201ENST00000606010 545 ntBASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 AC020634.1-201ENST00000608701 549 ntBASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 AL158063.1-201ENST00000615349 536 ntBASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 AC099669.2-201ENST00000616549 437 ntBASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 AL158196.1-201ENST00000616786 434 ntBASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 AC006065.6-201ENST00000625201 545 ntBASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 DHX40P1-201ENST00000588725 1412 ntBASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 AC117529.2-201ENST00000512159 2068 ntBASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 AC079741.1-201ENST00000321498 212 ntBASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 RNU4-24P-201ENST00000364565 139 ntBASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 RNU1-44P-201ENST00000384453 163 ntBASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 MIR649-201ENST00000384843 97 ntBASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 TPMTP3-201ENST00000411928 735 ntBASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 AL590139.1-201ENST00000416267 400 ntBASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 AC119751.6-201ENST00000416712 186 ntBASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 AC004690.1-201ENST00000418216 328 ntBASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 RPS15AP40-201ENST00000419621 391 ntBASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 AC069213.2-201ENST00000420238 366 ntBASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 AC073335.1-201ENST00000427776 363 ntBASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 TAF9P1-201ENST00000445421 515 ntBASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 RPL23AP43-201ENST00000446445 471 ntBASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 VN1R10P-201ENST00000447106 875 ntBASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 ZNF114P1-201ENST00000453500 292 ntBASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 TAF9P2-201ENST00000454958 515 ntBASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 RN7SL41P-201ENST00000476144 297 ntBASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 AC068724.1-201ENST00000487100 792 ntBASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 RPL12P22-201ENST00000519073 490 ntBASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 DEFB131D-201ENST00000526803 184 ntBASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 HIGD1AP10-201ENST00000527837 282 ntBASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 AC007115.1-201ENST00000546853 234 ntBASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 AC024909.2-201ENST00000553035 286 ntBASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 AP001180.3-201ENST00000582221 145 ntBASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 AC090181.2-201ENST00000602975 672 ntBASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 AC010680.4-201ENST00000605334 543 ntBASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 AC012557.2-201ENST00000605919 418 ntBASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 AC243773.3-201ENST00000613270 256 ntBASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
CDK5RAP3Q96JB5 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 RNU6-660P-201ENST00000364566 109 ntBASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 RNVU1-6-201ENST00000364688 164 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms