Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.66□□□□□ -1.82
RFT1Q96AA3 AC024940.4-201ENST00000605507 246 ntBASIC3.66□□□□□ -1.82
RFT1Q96AA3 RNU4-5P-201ENST00000607255 135 ntBASIC3.66□□□□□ -1.82
RFT1Q96AA3 AL513477.2-201ENST00000607858 568 ntBASIC3.66□□□□□ -1.82
RFT1Q96AA3 AL157392.4-201ENST00000609756 345 ntBASIC3.66□□□□□ -1.82
RFT1Q96AA3 AC004908.3-201ENST00000610248 625 ntBASIC3.66□□□□□ -1.82
RFT1Q96AA3 AC012409.3-201ENST00000611343 981 ntBASIC3.66□□□□□ -1.82
RFT1Q96AA3 Mico1.1-201ENST00000611698 204 ntBASIC3.66□□□□□ -1.82
RFT1Q96AA3 AL354976.1-201ENST00000613843 387 ntBASIC3.66□□□□□ -1.82
RFT1Q96AA3 AL391261.4-201ENST00000616012 481 ntBASIC3.66□□□□□ -1.82
RFT1Q96AA3 AC121761.2-201ENST00000617300 689 ntBASIC3.66□□□□□ -1.82
RFT1Q96AA3 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.66□□□□□ -1.82
RFT1Q96AA3 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.66□□□□□ -1.82
RFT1Q96AA3 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.66□□□□□ -1.82
RFT1Q96AA3 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.66□□□□□ -1.82
RFT1Q96AA3 U6.98-201ENST00000637157 84 ntBASIC3.66□□□□□ -1.82
RFT1Q96AA3 OR6C71P-202ENST00000641886 1107 ntBASIC3.66□□□□□ -1.82
RFT1Q96AA3 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RFT1Q96AA3 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RFT1Q96AA3 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RFT1Q96AA3 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RFT1Q96AA3 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
RFT1Q96AA3 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
RFT1Q96AA3 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.82
RFT1Q96AA3 ZNF37BP-203ENST00000452306 1352 ntBASIC3.65□□□□□ -1.82
RFT1Q96AA3 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
RFT1Q96AA3 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
RFT1Q96AA3 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
RFT1Q96AA3 DHX40P1-201ENST00000588725 1412 ntBASIC3.65□□□□□ -1.83
RFT1Q96AA3 OR5P1P-201ENST00000299512 925 ntBASIC3.65□□□□□ -1.83
RFT1Q96AA3 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
RFT1Q96AA3 OR4K15-201ENST00000305051 1216 ntBASIC3.65□□□□□ -1.83
RFT1Q96AA3 OR11H4-201ENST00000315409 1082 ntBASIC3.65□□□□□ -1.83
RFT1Q96AA3 RNU6-374P-201ENST00000364146 108 ntBASIC3.65□□□□□ -1.83
RFT1Q96AA3 RNU6-730P-201ENST00000383954 104 ntBASIC3.65□□□□□ -1.83
RFT1Q96AA3 MIR506-201ENST00000384998 124 ntBASIC3.65□□□□□ -1.83
RFT1Q96AA3 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RFT1Q96AA3 AL136310.1-201ENST00000404926 654 ntBASIC3.65□□□□□ -1.83
RFT1Q96AA3 MIR1179-201ENST00000408703 91 ntBASIC3.65□□□□□ -1.83
RFT1Q96AA3 RPS3AP37-201ENST00000419176 745 ntBASIC3.65□□□□□ -1.83
RFT1Q96AA3 MTND2P16-201ENST00000419987 799 ntBASIC3.65□□□□□ -1.83
RFT1Q96AA3 USP9YP9-201ENST00000429406 715 ntBASIC3.65□□□□□ -1.83
RFT1Q96AA3 AC011998.1-201ENST00000433403 117 ntBASIC3.65□□□□□ -1.83
RFT1Q96AA3 AL132765.1-201ENST00000434165 553 ntBASIC3.65□□□□□ -1.83
RFT1Q96AA3 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.65□□□□□ -1.83
RFT1Q96AA3 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.65□□□□□ -1.83
RFT1Q96AA3 PHBP16-201ENST00000446318 950 ntBASIC3.65□□□□□ -1.83
RFT1Q96AA3 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.65□□□□□ -1.83
RFT1Q96AA3 MTND2P28-201ENST00000457540 1044 ntBASIC3.65□□□□□ -1.83
RFT1Q96AA3 AL139824.2-201ENST00000458731 1095 ntBASIC3.65□□□□□ -1.83
RFT1Q96AA3 AC078785.3-201ENST00000476607 425 ntBASIC3.65□□□□□ -1.83
RFT1Q96AA3 RPS3AP6-201ENST00000484430 795 ntBASIC3.65□□□□□ -1.83
RFT1Q96AA3 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.65□□□□□ -1.83
RFT1Q96AA3 BNIP3P41-201ENST00000503774 571 ntBASIC3.65□□□□□ -1.83
RFT1Q96AA3 RNU6-1261P-201ENST00000517194 104 ntBASIC3.65□□□□□ -1.83
RFT1Q96AA3 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.65□□□□□ -1.83
RFT1Q96AA3 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.65□□□□□ -1.83
RFT1Q96AA3 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.65□□□□□ -1.83
RFT1Q96AA3 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RFT1Q96AA3 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.65□□□□□ -1.83
RFT1Q96AA3 AC063950.1-201ENST00000552036 308 ntBASIC3.65□□□□□ -1.83
RFT1Q96AA3 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.65□□□□□ -1.83
RFT1Q96AA3 GTF2IP8-201ENST00000560687 584 ntBASIC3.65□□□□□ -1.83
RFT1Q96AA3 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.65□□□□□ -1.83
RFT1Q96AA3 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.65□□□□□ -1.83
RFT1Q96AA3 MTATP6P24-201ENST00000576835 677 ntBASIC3.65□□□□□ -1.83
RFT1Q96AA3 MIR5047-201ENST00000579212 100 ntBASIC3.65□□□□□ -1.83
RFT1Q96AA3 RPL12P25-202ENST00000598100 674 ntBASIC3.65□□□□□ -1.83
RFT1Q96AA3 AL390838.2-201ENST00000602394 274 ntBASIC3.65□□□□□ -1.83
RFT1Q96AA3 AC007687.1-201ENST00000602704 304 ntBASIC3.65□□□□□ -1.83
RFT1Q96AA3 AC113368.1-201ENST00000603736 382 ntBASIC3.65□□□□□ -1.83
RFT1Q96AA3 AC115286.1-201ENST00000604298 434 ntBASIC3.65□□□□□ -1.83
RFT1Q96AA3 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.65□□□□□ -1.83
RFT1Q96AA3 AC092954.1-201ENST00000609121 445 ntBASIC3.65□□□□□ -1.83
RFT1Q96AA3 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.65□□□□□ -1.83
RFT1Q96AA3 AL049539.1-201ENST00000611964 459 ntBASIC3.65□□□□□ -1.83
RFT1Q96AA3 AL356863.1-201ENST00000623378 1080 ntBASIC3.65□□□□□ -1.83
RFT1Q96AA3 AL773545.4-201ENST00000637262 310 ntBASIC3.65□□□□□ -1.83
RFT1Q96AA3 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
RFT1Q96AA3 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
RFT1Q96AA3 AL513478.4-201ENST00000641636 310 ntBASIC3.65□□□□□ -1.83
RFT1Q96AA3 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RFT1Q96AA3 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.65□□□□□ -1.83
RFT1Q96AA3 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
RFT1Q96AA3 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
RFT1Q96AA3 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.65□□□□□ -1.83
RFT1Q96AA3 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.65□□□□□ -1.83
RFT1Q96AA3 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.65□□□□□ -1.83
RFT1Q96AA3 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
RFT1Q96AA3 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.64□□□□□ -1.83
RFT1Q96AA3 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
RFT1Q96AA3 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
RFT1Q96AA3 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RFT1Q96AA3 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RFT1Q96AA3 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.64□□□□□ -1.83
RFT1Q96AA3 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
RFT1Q96AA3 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
RFT1Q96AA3 RNU6-339P-201ENST00000384310 107 ntBASIC3.64□□□□□ -1.83
RFT1Q96AA3 AL024474.1-201ENST00000404655 591 ntBASIC3.64□□□□□ -1.83
RFT1Q96AA3 RPL23AP47-201ENST00000408017 460 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms