Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC1.77□□□□□ -2.13
SPTSSBQ8NFR3 MIR3670-4-201ENST00000612260 65 ntBASIC1.77□□□□□ -2.13
SPTSSBQ8NFR3 MIR7151-201ENST00000617477 60 ntBASIC1.77□□□□□ -2.13
SPTSSBQ8NFR3 AC069209.1-201ENST00000619282 651 ntBASIC1.77□□□□□ -2.13
SPTSSBQ8NFR3 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
SPTSSBQ8NFR3 SNORD39.4-201ENST00000620099 78 ntBASIC1.77□□□□□ -2.13
SPTSSBQ8NFR3 AL357559.1-201ENST00000622228 274 ntBASIC1.77□□□□□ -2.13
SPTSSBQ8NFR3 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC1.77□□□□□ -2.13
SPTSSBQ8NFR3 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC1.77□□□□□ -2.13
SPTSSBQ8NFR3 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 AL590763.1-201ENST00000398297 1545 ntBASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 AL645568.2-201ENST00000432815 1337 ntBASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 IGKV7-3-201ENST00000357453 298 ntBASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 MIR383-201ENST00000362257 73 ntBASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 RNA5SP242-201ENST00000364171 118 ntBASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 MIR144-201ENST00000384886 86 ntBASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 RNU11-4P-201ENST00000391149 133 ntBASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 AC025750.1-201ENST00000399891 379 ntBASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 RPS3AP23-201ENST00000401762 784 ntBASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 TANK-203ENST00000402568 878 ntTSL 5 BASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 GLS-203ENST00000409215 632 ntTSL 4 BASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 RNA5SP274-201ENST00000410484 108 ntBASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 NRBF2P2-201ENST00000413087 861 ntBASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 TPT1P2-201ENST00000413105 503 ntBASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 KCTD10P1-201ENST00000434203 625 ntBASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 RPS3AP54-201ENST00000435535 734 ntBASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 AC127537.2-201ENST00000439258 465 ntBASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 LAMTOR5P1-201ENST00000444290 270 ntBASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 CDC27P1-201ENST00000445384 715 ntBASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 EIF4EBP2P1-201ENST00000450009 343 ntBASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 MTCYBP14-201ENST00000457471 715 ntBASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 snoU13.7-201ENST00000459220 104 ntBASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 AP000852.1-201ENST00000472460 573 ntBASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 AC007686.1-201ENST00000488511 463 ntBASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 AC104619.4-201ENST00000510773 249 ntBASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 AC008716.1-201ENST00000511084 513 ntBASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 AC034244.2-201ENST00000514668 858 ntBASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 RAB9BP1-201ENST00000519581 626 ntBASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 HMGN2P6-201ENST00000551091 273 ntBASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 RPL23AP78-201ENST00000599928 470 ntBASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.76□□□□□ -2.13
SPTSSBQ8NFR3 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.75□□□□□ -2.13
SPTSSBQ8NFR3 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.75□□□□□ -2.13
SPTSSBQ8NFR3 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
SPTSSBQ8NFR3 CD36-221ENST00000534394 1741 ntTSL 2 BASIC1.75□□□□□ -2.13
SPTSSBQ8NFR3 AL672167.1-206ENST00000356293 943 ntBASIC1.75□□□□□ -2.13
SPTSSBQ8NFR3 RNU1-64P-201ENST00000365443 163 ntBASIC1.75□□□□□ -2.13
SPTSSBQ8NFR3 RNU6-185P-201ENST00000384421 107 ntBASIC1.75□□□□□ -2.13
SPTSSBQ8NFR3 RN7SKP229-201ENST00000410465 302 ntBASIC1.75□□□□□ -2.13
SPTSSBQ8NFR3 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SPTSSBQ8NFR3 RPL21P32-201ENST00000419877 477 ntBASIC1.75□□□□□ -2.13
SPTSSBQ8NFR3 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC1.75□□□□□ -2.13
SPTSSBQ8NFR3 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC1.75□□□□□ -2.13
SPTSSBQ8NFR3 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC1.75□□□□□ -2.13
SPTSSBQ8NFR3 RPS29P17-201ENST00000430795 166 ntBASIC1.75□□□□□ -2.13
SPTSSBQ8NFR3 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SPTSSBQ8NFR3 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC1.75□□□□□ -2.13
SPTSSBQ8NFR3 AC006326.1-201ENST00000445465 787 ntBASIC1.75□□□□□ -2.13
SPTSSBQ8NFR3 RPL34P26-201ENST00000445636 354 ntBASIC1.75□□□□□ -2.13
SPTSSBQ8NFR3 PRDX3P3-201ENST00000447765 522 ntBASIC1.75□□□□□ -2.13
SPTSSBQ8NFR3 AC009961.3-201ENST00000449832 765 ntBASIC1.75□□□□□ -2.13
SPTSSBQ8NFR3 AC115115.1-201ENST00000449927 248 ntBASIC1.75□□□□□ -2.13
SPTSSBQ8NFR3 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC1.75□□□□□ -2.13
SPTSSBQ8NFR3 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SPTSSBQ8NFR3 HMGB1P26-201ENST00000452520 628 ntBASIC1.75□□□□□ -2.13
SPTSSBQ8NFR3 RPL23AP24-201ENST00000458203 385 ntBASIC1.75□□□□□ -2.13
SPTSSBQ8NFR3 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC1.75□□□□□ -2.13
SPTSSBQ8NFR3 RPL12P20-201ENST00000475538 479 ntBASIC1.75□□□□□ -2.13
SPTSSBQ8NFR3 ACTR3P3-201ENST00000480448 893 ntBASIC1.75□□□□□ -2.13
SPTSSBQ8NFR3 AP004217.1-201ENST00000480579 346 ntBASIC1.75□□□□□ -2.13
SPTSSBQ8NFR3 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC1.75□□□□□ -2.13
SPTSSBQ8NFR3 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC1.75□□□□□ -2.13
SPTSSBQ8NFR3 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC1.75□□□□□ -2.13
SPTSSBQ8NFR3 AC108475.1-201ENST00000507880 950 ntBASIC1.75□□□□□ -2.13
SPTSSBQ8NFR3 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC1.75□□□□□ -2.13
SPTSSBQ8NFR3 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC1.75□□□□□ -2.13
SPTSSBQ8NFR3 SNORA31.20-201ENST00000517111 133 ntBASIC1.75□□□□□ -2.13
SPTSSBQ8NFR3 RNU1-104P-201ENST00000517280 175 ntBASIC1.75□□□□□ -2.13
SPTSSBQ8NFR3 TBCA-206ENST00000518338 551 ntTSL 2 BASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms