Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 AL451142.2-201ENST00000429076 2090 ntBASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
DEPDC4Q8N2C3 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 AP005435.3-201ENST00000531260 3198 ntBASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 UQCRC2P1-201ENST00000417777 1332 ntBASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 DDX10P1-201ENST00000448545 1933 ntBASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 RNU6-562P-201ENST00000362731 107 ntBASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 SNORA38B-201ENST00000363524 131 ntBASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 RNU6-946P-201ENST00000383878 107 ntBASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 SNORA75B-201ENST00000384053 137 ntBASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 RNA5SP176-201ENST00000390956 110 ntBASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 MIR1302-3-201ENST00000408128 138 ntBASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 RNU2-47P-201ENST00000410649 186 ntBASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 Y_RNA.618-201ENST00000410949 107 ntBASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 AL590399.4-201ENST00000436561 601 ntBASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 AC064862.5-201ENST00000440618 334 ntBASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 AL731563.1-201ENST00000442202 214 ntBASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 HMGB3P21-201ENST00000452483 547 ntBASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 MIR2053-201ENST00000459295 91 ntBASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 DYNLL1P5-201ENST00000467158 270 ntBASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 HMGB1P25-201ENST00000468402 607 ntBASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 AC005798.1-201ENST00000513715 387 ntBASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 RNU6-123P-201ENST00000516163 102 ntBASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 RN7SKP11-201ENST00000517018 287 ntBASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 RNA5SP278-201ENST00000517055 102 ntBASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 IGKV2D-38-201ENST00000518423 240 ntBASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 AC105031.1-201ENST00000518550 476 ntBASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 AC073916.1-201ENST00000545095 130 ntBASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 OR1F2P-201ENST00000570470 933 ntBASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 AL031176.1-201ENST00000604554 466 ntBASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 FAM157A-202ENST00000615155 405 ntBASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 AL355365.1-201ENST00000616480 294 ntBASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 PABPC1P7-201ENST00000413177 1513 ntBASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 AP002512.4-202ENST00000641599 4530 ntBASIC6.04□□□□□ -1.44
DEPDC4Q8N2C3 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 Y_RNA.149-201ENST00000363558 117 ntBASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 AC019155.1-201ENST00000382242 574 ntBASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 RNU6-821P-201ENST00000390995 107 ntBASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 AC092642.1-201ENST00000392417 425 ntBASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 RN7SKP296-201ENST00000411185 341 ntBASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 RPLP0P7-201ENST00000416050 667 ntBASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 Z93019.1-201ENST00000416450 973 ntBASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 UBE2FP1-201ENST00000416536 447 ntBASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 CYCSP52-201ENST00000422857 310 ntBASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 RPL30P3-201ENST00000424262 333 ntBASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 RPL12P34-201ENST00000424532 479 ntBASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 AL353597.2-202ENST00000434901 373 ntBASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 AC234771.4-201ENST00000441416 730 ntBASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 DNAJC19P5-201ENST00000443295 316 ntBASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 CYCSP24-201ENST00000445119 316 ntBASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 RPL21P23-201ENST00000446654 460 ntBASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 AL162389.1-201ENST00000449233 177 ntBASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 RNU7-167P-201ENST00000459160 62 ntBASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 RN7SL372P-201ENST00000461982 298 ntBASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 RN7SL390P-201ENST00000470634 284 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms