Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.03□□□□□ -1.76
BEST3Q8N1M1 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.03□□□□□ -1.76
BEST3Q8N1M1 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.03□□□□□ -1.76
BEST3Q8N1M1 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.03□□□□□ -1.76
BEST3Q8N1M1 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.03□□□□□ -1.76
BEST3Q8N1M1 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.03□□□□□ -1.76
BEST3Q8N1M1 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.03□□□□□ -1.76
BEST3Q8N1M1 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.03□□□□□ -1.76
BEST3Q8N1M1 AC091515.1-201ENST00000548110 679 ntBASIC4.03□□□□□ -1.76
BEST3Q8N1M1 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.03□□□□□ -1.76
BEST3Q8N1M1 LSM6P2-201ENST00000552208 177 ntBASIC4.03□□□□□ -1.76
BEST3Q8N1M1 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.03□□□□□ -1.76
BEST3Q8N1M1 AL389895.1-201ENST00000554127 252 ntBASIC4.03□□□□□ -1.76
BEST3Q8N1M1 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.03□□□□□ -1.76
BEST3Q8N1M1 AC090888.1-201ENST00000561335 1141 ntBASIC4.03□□□□□ -1.76
BEST3Q8N1M1 AGGF1P8-201ENST00000562979 1000 ntBASIC4.03□□□□□ -1.76
BEST3Q8N1M1 AC124068.1-201ENST00000563131 678 ntBASIC4.03□□□□□ -1.76
BEST3Q8N1M1 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.03□□□□□ -1.76
BEST3Q8N1M1 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.03□□□□□ -1.76
BEST3Q8N1M1 AL512347.1-201ENST00000566420 503 ntBASIC4.03□□□□□ -1.76
BEST3Q8N1M1 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.03□□□□□ -1.76
BEST3Q8N1M1 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.03□□□□□ -1.76
BEST3Q8N1M1 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.03□□□□□ -1.76
BEST3Q8N1M1 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.03□□□□□ -1.76
BEST3Q8N1M1 AC015813.4-201ENST00000610469 179 ntBASIC4.03□□□□□ -1.76
BEST3Q8N1M1 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
BEST3Q8N1M1 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.03□□□□□ -1.76
BEST3Q8N1M1 AC092650.2-201ENST00000619984 902 ntBASIC4.03□□□□□ -1.76
BEST3Q8N1M1 AC079248.2-201ENST00000623779 326 ntBASIC4.03□□□□□ -1.76
BEST3Q8N1M1 MIR3974-201ENST00000637126 96 ntBASIC4.03□□□□□ -1.76
BEST3Q8N1M1 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.03□□□□□ -1.76
BEST3Q8N1M1 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.03□□□□□ -1.76
BEST3Q8N1M1 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
BEST3Q8N1M1 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.03□□□□□ -1.76
BEST3Q8N1M1 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
BEST3Q8N1M1 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
BEST3Q8N1M1 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
BEST3Q8N1M1 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
BEST3Q8N1M1 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
BEST3Q8N1M1 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
BEST3Q8N1M1 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
BEST3Q8N1M1 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
BEST3Q8N1M1 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
BEST3Q8N1M1 AL391994.1-201ENST00000254724 282 ntBASIC4.02□□□□□ -1.77
BEST3Q8N1M1 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
BEST3Q8N1M1 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
BEST3Q8N1M1 OR52B1P-201ENST00000316506 909 ntBASIC4.02□□□□□ -1.77
BEST3Q8N1M1 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
BEST3Q8N1M1 RNU4-40P-201ENST00000364351 143 ntBASIC4.02□□□□□ -1.77
BEST3Q8N1M1 RPS26P8-201ENST00000393490 348 ntBASIC4.02□□□□□ -1.77
BEST3Q8N1M1 AL583835.1-201ENST00000399570 407 ntBASIC4.02□□□□□ -1.77
BEST3Q8N1M1 AL450338.1-201ENST00000407987 512 ntBASIC4.02□□□□□ -1.77
BEST3Q8N1M1 MIR1193-201ENST00000408109 78 ntBASIC4.02□□□□□ -1.77
BEST3Q8N1M1 AC073264.1-201ENST00000411508 416 ntBASIC4.02□□□□□ -1.77
BEST3Q8N1M1 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.02□□□□□ -1.77
BEST3Q8N1M1 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.02□□□□□ -1.77
BEST3Q8N1M1 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.02□□□□□ -1.77
BEST3Q8N1M1 USP9YP26-201ENST00000421008 661 ntBASIC4.02□□□□□ -1.77
BEST3Q8N1M1 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.02□□□□□ -1.77
BEST3Q8N1M1 RPL23AP16-201ENST00000441715 421 ntBASIC4.02□□□□□ -1.77
BEST3Q8N1M1 RPL18AP17-201ENST00000455326 198 ntBASIC4.02□□□□□ -1.77
BEST3Q8N1M1 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.02□□□□□ -1.77
BEST3Q8N1M1 RPS20P21-201ENST00000466859 343 ntBASIC4.02□□□□□ -1.77
BEST3Q8N1M1 RPL7P19-201ENST00000469948 618 ntBASIC4.02□□□□□ -1.77
BEST3Q8N1M1 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.02□□□□□ -1.77
BEST3Q8N1M1 NCOR1P1-202ENST00000486162 291 ntBASIC4.02□□□□□ -1.77
BEST3Q8N1M1 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.02□□□□□ -1.77
BEST3Q8N1M1 HMGB1P21-201ENST00000502313 581 ntBASIC4.02□□□□□ -1.77
BEST3Q8N1M1 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.02□□□□□ -1.77
BEST3Q8N1M1 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.02□□□□□ -1.77
BEST3Q8N1M1 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.02□□□□□ -1.77
BEST3Q8N1M1 AC105313.1-201ENST00000509121 353 ntBASIC4.02□□□□□ -1.77
BEST3Q8N1M1 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.02□□□□□ -1.77
BEST3Q8N1M1 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
BEST3Q8N1M1 RNA5SP154-201ENST00000516193 111 ntBASIC4.02□□□□□ -1.77
BEST3Q8N1M1 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.02□□□□□ -1.77
BEST3Q8N1M1 AP003730.1-201ENST00000524605 285 ntBASIC4.02□□□□□ -1.77
BEST3Q8N1M1 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.02□□□□□ -1.77
BEST3Q8N1M1 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.02□□□□□ -1.77
BEST3Q8N1M1 OR5BC1P-201ENST00000529327 739 ntBASIC4.02□□□□□ -1.77
BEST3Q8N1M1 AC100770.1-201ENST00000532310 322 ntBASIC4.02□□□□□ -1.77
BEST3Q8N1M1 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.02□□□□□ -1.77
BEST3Q8N1M1 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.02□□□□□ -1.77
BEST3Q8N1M1 AC090616.2-202ENST00000584248 222 ntBASIC4.02□□□□□ -1.77
BEST3Q8N1M1 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.02□□□□□ -1.77
BEST3Q8N1M1 RPL7P50-201ENST00000600588 727 ntBASIC4.02□□□□□ -1.77
BEST3Q8N1M1 AC004987.4-201ENST00000603383 338 ntBASIC4.02□□□□□ -1.77
BEST3Q8N1M1 Z99497.2-201ENST00000603634 310 ntBASIC4.02□□□□□ -1.77
BEST3Q8N1M1 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.02□□□□□ -1.77
BEST3Q8N1M1 AC068722.2-201ENST00000618734 544 ntBASIC4.02□□□□□ -1.77
BEST3Q8N1M1 AL607023.1-201ENST00000620045 248 ntBASIC4.02□□□□□ -1.77
BEST3Q8N1M1 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.02□□□□□ -1.77
BEST3Q8N1M1 AL023881.1-201ENST00000621088 301 ntBASIC4.02□□□□□ -1.77
BEST3Q8N1M1 AC004943.3-201ENST00000624116 600 ntBASIC4.02□□□□□ -1.77
BEST3Q8N1M1 AC092184.1-201ENST00000625042 715 ntBASIC4.02□□□□□ -1.77
BEST3Q8N1M1 AC007671.2-201ENST00000637344 619 ntBASIC4.02□□□□□ -1.77
BEST3Q8N1M1 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
BEST3Q8N1M1 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
BEST3Q8N1M1 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
BEST3Q8N1M1 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms