Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 RPL31P54-201ENST00000429803 370 ntBASIC4.66□□□□□ -1.66
HERC6Q8IVU3 RPL23AP83-201ENST00000434984 473 ntBASIC4.66□□□□□ -1.66
HERC6Q8IVU3 MTCYBP31-201ENST00000438855 1122 ntBASIC4.66□□□□□ -1.66
HERC6Q8IVU3 MTND3P1-201ENST00000441336 220 ntBASIC4.66□□□□□ -1.66
HERC6Q8IVU3 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.66□□□□□ -1.66
HERC6Q8IVU3 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HERC6Q8IVU3 AL133547.1-201ENST00000448546 220 ntBASIC4.66□□□□□ -1.66
HERC6Q8IVU3 BX276092.4-201ENST00000452056 248 ntBASIC4.66□□□□□ -1.66
HERC6Q8IVU3 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.66□□□□□ -1.66
HERC6Q8IVU3 AC005008.1-201ENST00000456151 612 ntBASIC4.66□□□□□ -1.66
HERC6Q8IVU3 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.66□□□□□ -1.66
HERC6Q8IVU3 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.66□□□□□ -1.66
HERC6Q8IVU3 RPL7P18-201ENST00000478965 734 ntBASIC4.66□□□□□ -1.66
HERC6Q8IVU3 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.66□□□□□ -1.66
HERC6Q8IVU3 RPS4XP18-201ENST00000495480 763 ntBASIC4.66□□□□□ -1.66
HERC6Q8IVU3 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.66□□□□□ -1.66
HERC6Q8IVU3 RN7SKP31-201ENST00000516354 278 ntBASIC4.66□□□□□ -1.66
HERC6Q8IVU3 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.66□□□□□ -1.66
HERC6Q8IVU3 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.66□□□□□ -1.66
HERC6Q8IVU3 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.66□□□□□ -1.66
HERC6Q8IVU3 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.66□□□□□ -1.66
HERC6Q8IVU3 AC023538.1-201ENST00000534576 736 ntBASIC4.66□□□□□ -1.66
HERC6Q8IVU3 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.66□□□□□ -1.66
HERC6Q8IVU3 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.66□□□□□ -1.66
HERC6Q8IVU3 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.66□□□□□ -1.66
HERC6Q8IVU3 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.66□□□□□ -1.66
HERC6Q8IVU3 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.66□□□□□ -1.66
HERC6Q8IVU3 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HERC6Q8IVU3 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC4.66□□□□□ -1.66
HERC6Q8IVU3 AC107982.3-201ENST00000584957 985 ntBASIC4.66□□□□□ -1.66
HERC6Q8IVU3 CLIC4P2-201ENST00000601934 717 ntBASIC4.66□□□□□ -1.66
HERC6Q8IVU3 AL009028.1-201ENST00000604895 802 ntBASIC4.66□□□□□ -1.66
HERC6Q8IVU3 AC113194.1-201ENST00000606037 500 ntBASIC4.66□□□□□ -1.66
HERC6Q8IVU3 AC091946.2-201ENST00000606105 291 ntBASIC4.66□□□□□ -1.66
HERC6Q8IVU3 AL159169.3-201ENST00000608871 561 ntBASIC4.66□□□□□ -1.66
HERC6Q8IVU3 AL021997.2-201ENST00000615674 271 ntBASIC4.66□□□□□ -1.66
HERC6Q8IVU3 AC231759.1-201ENST00000616455 597 ntBASIC4.66□□□□□ -1.66
HERC6Q8IVU3 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.66□□□□□ -1.66
HERC6Q8IVU3 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HERC6Q8IVU3 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
HERC6Q8IVU3 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
HERC6Q8IVU3 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
HERC6Q8IVU3 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
HERC6Q8IVU3 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HERC6Q8IVU3 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.65□□□□□ -1.67
HERC6Q8IVU3 RNU6-216P-201ENST00000363282 104 ntBASIC4.65□□□□□ -1.67
HERC6Q8IVU3 RNU6-1226P-201ENST00000384317 107 ntBASIC4.65□□□□□ -1.67
HERC6Q8IVU3 RNU6-1122P-201ENST00000384449 107 ntBASIC4.65□□□□□ -1.67
HERC6Q8IVU3 MIR1250-201ENST00000408098 113 ntBASIC4.65□□□□□ -1.67
HERC6Q8IVU3 AC009237.5-201ENST00000414271 501 ntBASIC4.65□□□□□ -1.67
HERC6Q8IVU3 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.65□□□□□ -1.67
HERC6Q8IVU3 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.65□□□□□ -1.67
HERC6Q8IVU3 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.65□□□□□ -1.67
HERC6Q8IVU3 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.65□□□□□ -1.67
HERC6Q8IVU3 OR4F13P-201ENST00000428478 931 ntBASIC4.65□□□□□ -1.67
HERC6Q8IVU3 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC4.65□□□□□ -1.67
HERC6Q8IVU3 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.65□□□□□ -1.67
HERC6Q8IVU3 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.65□□□□□ -1.67
HERC6Q8IVU3 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.65□□□□□ -1.67
HERC6Q8IVU3 MTCYBP11-201ENST00000447254 1109 ntBASIC4.65□□□□□ -1.67
HERC6Q8IVU3 GAPDHP36-201ENST00000480688 918 ntBASIC4.65□□□□□ -1.67
HERC6Q8IVU3 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.65□□□□□ -1.67
HERC6Q8IVU3 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.65□□□□□ -1.67
HERC6Q8IVU3 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.65□□□□□ -1.67
HERC6Q8IVU3 RN7SKP277-201ENST00000516895 283 ntBASIC4.65□□□□□ -1.67
HERC6Q8IVU3 AF186190.1-201ENST00000517470 480 ntBASIC4.65□□□□□ -1.67
HERC6Q8IVU3 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.65□□□□□ -1.67
HERC6Q8IVU3 AP000790.1-201ENST00000528891 737 ntBASIC4.65□□□□□ -1.67
HERC6Q8IVU3 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
HERC6Q8IVU3 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.65□□□□□ -1.67
HERC6Q8IVU3 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.65□□□□□ -1.67
HERC6Q8IVU3 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.65□□□□□ -1.67
HERC6Q8IVU3 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.65□□□□□ -1.67
HERC6Q8IVU3 HIGD1AP17-201ENST00000554576 276 ntBASIC4.65□□□□□ -1.67
HERC6Q8IVU3 RPL21P7-201ENST00000557463 483 ntBASIC4.65□□□□□ -1.67
HERC6Q8IVU3 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.65□□□□□ -1.67
HERC6Q8IVU3 AP003392.5-201ENST00000607857 415 ntBASIC4.65□□□□□ -1.67
HERC6Q8IVU3 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HERC6Q8IVU3 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.65□□□□□ -1.67
HERC6Q8IVU3 AP006248.2-201ENST00000623309 592 ntBASIC4.65□□□□□ -1.67
HERC6Q8IVU3 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.65□□□□□ -1.67
HERC6Q8IVU3 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HERC6Q8IVU3 AC116618.1-201ENST00000634617 774 ntBASIC4.65□□□□□ -1.67
HERC6Q8IVU3 AC012442.3-202ENST00000636742 206 ntBASIC4.65□□□□□ -1.67
HERC6Q8IVU3 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
HERC6Q8IVU3 MAPK10-303ENST00000641324 3959 ntBASIC4.65□□□□□ -1.67
HERC6Q8IVU3 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
HERC6Q8IVU3 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.65□□□□□ -1.67
HERC6Q8IVU3 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.65□□□□□ -1.67
HERC6Q8IVU3 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.65□□□□□ -1.67
HERC6Q8IVU3 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.65□□□□□ -1.67
HERC6Q8IVU3 AC090229.1-201ENST00000590983 1609 ntBASIC4.64□□□□□ -1.67
HERC6Q8IVU3 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HERC6Q8IVU3 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
HERC6Q8IVU3 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
HERC6Q8IVU3 AL390862.1-201ENST00000635467 1469 ntBASIC4.64□□□□□ -1.67
HERC6Q8IVU3 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
HERC6Q8IVU3 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HERC6Q8IVU3 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
HERC6Q8IVU3 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms