Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PRPF39Q86UA1 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PRPF39Q86UA1 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PRPF39Q86UA1 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
PRPF39Q86UA1 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
PRPF39Q86UA1 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
PRPF39Q86UA1 RNU6-263P-201ENST00000363811 107 ntBASIC4.24□□□□□ -1.73
PRPF39Q86UA1 RNA5SP513-201ENST00000364648 118 ntBASIC4.24□□□□□ -1.73
PRPF39Q86UA1 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.24□□□□□ -1.73
PRPF39Q86UA1 SUGT1P1-201ENST00000379514 476 ntBASIC4.24□□□□□ -1.73
PRPF39Q86UA1 AC025750.1-201ENST00000399891 379 ntBASIC4.24□□□□□ -1.73
PRPF39Q86UA1 PPIAP31-201ENST00000405422 495 ntBASIC4.24□□□□□ -1.73
PRPF39Q86UA1 RNU4-78P-201ENST00000410940 126 ntBASIC4.24□□□□□ -1.73
PRPF39Q86UA1 AL356095.1-201ENST00000417217 199 ntBASIC4.24□□□□□ -1.73
PRPF39Q86UA1 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.24□□□□□ -1.73
PRPF39Q86UA1 RPL23AP46-201ENST00000438548 490 ntBASIC4.24□□□□□ -1.73
PRPF39Q86UA1 USP9YP22-201ENST00000438971 294 ntBASIC4.24□□□□□ -1.73
PRPF39Q86UA1 HMGN2P21-201ENST00000447764 270 ntBASIC4.24□□□□□ -1.73
PRPF39Q86UA1 AC112492.1-201ENST00000449607 712 ntBASIC4.24□□□□□ -1.73
PRPF39Q86UA1 AC133473.1-201ENST00000455173 299 ntBASIC4.24□□□□□ -1.73
PRPF39Q86UA1 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.24□□□□□ -1.73
PRPF39Q86UA1 AP000873.1-201ENST00000463987 400 ntBASIC4.24□□□□□ -1.73
PRPF39Q86UA1 AC022034.3-201ENST00000471393 478 ntBASIC4.24□□□□□ -1.73
PRPF39Q86UA1 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC4.24□□□□□ -1.73
PRPF39Q86UA1 AL132838.2-201ENST00000492041 314 ntBASIC4.24□□□□□ -1.73
PRPF39Q86UA1 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.24□□□□□ -1.73
PRPF39Q86UA1 AC113347.3-201ENST00000509113 148 ntBASIC4.24□□□□□ -1.73
PRPF39Q86UA1 MTCO3P44-201ENST00000510977 541 ntBASIC4.24□□□□□ -1.73
PRPF39Q86UA1 FTH1P9-201ENST00000513251 355 ntBASIC4.24□□□□□ -1.73
PRPF39Q86UA1 MTCO1P30-201ENST00000515244 580 ntBASIC4.24□□□□□ -1.73
PRPF39Q86UA1 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.24□□□□□ -1.73
PRPF39Q86UA1 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PRPF39Q86UA1 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.24□□□□□ -1.73
PRPF39Q86UA1 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.24□□□□□ -1.73
PRPF39Q86UA1 AC135001.1-201ENST00000544546 283 ntBASIC4.24□□□□□ -1.73
PRPF39Q86UA1 AC063950.1-201ENST00000552036 308 ntBASIC4.24□□□□□ -1.73
PRPF39Q86UA1 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.24□□□□□ -1.73
PRPF39Q86UA1 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.24□□□□□ -1.73
PRPF39Q86UA1 RN7SL600P-201ENST00000581811 299 ntBASIC4.24□□□□□ -1.73
PRPF39Q86UA1 AC107982.3-201ENST00000584957 985 ntBASIC4.24□□□□□ -1.73
PRPF39Q86UA1 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.24□□□□□ -1.73
PRPF39Q86UA1 AL035411.2-201ENST00000604022 421 ntBASIC4.24□□□□□ -1.73
PRPF39Q86UA1 AC021749.1-201ENST00000604322 607 ntBASIC4.24□□□□□ -1.73
PRPF39Q86UA1 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.24□□□□□ -1.73
PRPF39Q86UA1 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.24□□□□□ -1.73
PRPF39Q86UA1 AC010608.2-201ENST00000624830 470 ntBASIC4.24□□□□□ -1.73
PRPF39Q86UA1 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.24□□□□□ -1.73
PRPF39Q86UA1 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.24□□□□□ -1.73
PRPF39Q86UA1 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
PRPF39Q86UA1 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PRPF39Q86UA1 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PRPF39Q86UA1 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.24□□□□□ -1.73
PRPF39Q86UA1 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PRPF39Q86UA1 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.23□□□□□ -1.73
PRPF39Q86UA1 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PRPF39Q86UA1 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
PRPF39Q86UA1 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PRPF39Q86UA1 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
PRPF39Q86UA1 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
PRPF39Q86UA1 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
PRPF39Q86UA1 snoZ40.1-201ENST00000364540 72 ntBASIC4.23□□□□□ -1.73
PRPF39Q86UA1 RPL23AP48-201ENST00000406913 488 ntBASIC4.23□□□□□ -1.73
PRPF39Q86UA1 RN7SKP33-201ENST00000410942 340 ntBASIC4.23□□□□□ -1.73
PRPF39Q86UA1 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.23□□□□□ -1.73
PRPF39Q86UA1 AC007435.1-201ENST00000421086 415 ntBASIC4.23□□□□□ -1.73
PRPF39Q86UA1 USP12PY-201ENST00000427677 1064 ntBASIC4.23□□□□□ -1.73
PRPF39Q86UA1 RPL31P54-201ENST00000429803 370 ntBASIC4.23□□□□□ -1.73
PRPF39Q86UA1 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.23□□□□□ -1.73
PRPF39Q86UA1 AL117339.2-201ENST00000430475 180 ntBASIC4.23□□□□□ -1.73
PRPF39Q86UA1 GTF2IP7-202ENST00000436677 309 ntBASIC4.23□□□□□ -1.73
PRPF39Q86UA1 AC122718.1-201ENST00000439448 744 ntBASIC4.23□□□□□ -1.73
PRPF39Q86UA1 EXOSC3P1-201ENST00000448649 500 ntBASIC4.23□□□□□ -1.73
PRPF39Q86UA1 HMGB3P22-202ENST00000451823 572 ntBASIC4.23□□□□□ -1.73
PRPF39Q86UA1 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.23□□□□□ -1.73
PRPF39Q86UA1 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.23□□□□□ -1.73
PRPF39Q86UA1 FAM133DP-201ENST00000464802 691 ntBASIC4.23□□□□□ -1.73
PRPF39Q86UA1 SYPL1P1-201ENST00000473622 768 ntBASIC4.23□□□□□ -1.73
PRPF39Q86UA1 AF213884.1-201ENST00000488102 463 ntBASIC4.23□□□□□ -1.73
PRPF39Q86UA1 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.23□□□□□ -1.73
PRPF39Q86UA1 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.23□□□□□ -1.73
PRPF39Q86UA1 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.23□□□□□ -1.73
PRPF39Q86UA1 AC027309.2-201ENST00000520566 192 ntBASIC4.23□□□□□ -1.73
PRPF39Q86UA1 OR10V3P-201ENST00000525712 725 ntBASIC4.23□□□□□ -1.73
PRPF39Q86UA1 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC4.23□□□□□ -1.73
PRPF39Q86UA1 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.23□□□□□ -1.73
PRPF39Q86UA1 MIR4286-201ENST00000580651 93 ntBASIC4.23□□□□□ -1.73
PRPF39Q86UA1 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.23□□□□□ -1.73
PRPF39Q86UA1 AL390838.2-201ENST00000602394 274 ntBASIC4.23□□□□□ -1.73
PRPF39Q86UA1 AL355812.1-201ENST00000603215 216 ntBASIC4.23□□□□□ -1.73
PRPF39Q86UA1 DPRXP5-201ENST00000604662 539 ntBASIC4.23□□□□□ -1.73
PRPF39Q86UA1 AC069545.1-201ENST00000605671 358 ntBASIC4.23□□□□□ -1.73
PRPF39Q86UA1 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.23□□□□□ -1.73
PRPF39Q86UA1 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.23□□□□□ -1.73
PRPF39Q86UA1 MIR6867-201ENST00000610636 67 ntBASIC4.23□□□□□ -1.73
PRPF39Q86UA1 AL713922.2-201ENST00000619384 716 ntBASIC4.23□□□□□ -1.73
PRPF39Q86UA1 AC022960.3-201ENST00000619794 441 ntBASIC4.23□□□□□ -1.73
PRPF39Q86UA1 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.23□□□□□ -1.73
PRPF39Q86UA1 AL161637.1-201ENST00000622380 412 ntBASIC4.23□□□□□ -1.73
PRPF39Q86UA1 AF001550.2-201ENST00000636643 217 ntBASIC4.23□□□□□ -1.73
PRPF39Q86UA1 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 169.7 ms