Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 RPS4XP13-201ENST00000483219 789 ntBASIC3.3□□□□□ -1.88
RTL4Q6ZR62 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.3□□□□□ -1.88
RTL4Q6ZR62 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.3□□□□□ -1.88
RTL4Q6ZR62 RNU2-27P-201ENST00000516185 142 ntBASIC3.3□□□□□ -1.88
RTL4Q6ZR62 RNU6-579P-201ENST00000516879 102 ntBASIC3.3□□□□□ -1.88
RTL4Q6ZR62 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.3□□□□□ -1.88
RTL4Q6ZR62 AC103843.2-201ENST00000530523 682 ntBASIC3.3□□□□□ -1.88
RTL4Q6ZR62 OR5B10P-201ENST00000532869 642 ntBASIC3.3□□□□□ -1.88
RTL4Q6ZR62 AC023161.2-201ENST00000551218 780 ntBASIC3.3□□□□□ -1.88
RTL4Q6ZR62 AL163153.1-201ENST00000554223 283 ntBASIC3.3□□□□□ -1.88
RTL4Q6ZR62 MTND4LP24-201ENST00000572277 291 ntBASIC3.3□□□□□ -1.88
RTL4Q6ZR62 MIR3944-201ENST00000581277 108 ntBASIC3.3□□□□□ -1.88
RTL4Q6ZR62 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.3□□□□□ -1.88
RTL4Q6ZR62 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.3□□□□□ -1.88
RTL4Q6ZR62 AC006077.1-201ENST00000604746 343 ntBASIC3.3□□□□□ -1.88
RTL4Q6ZR62 AC016877.3-201ENST00000606778 504 ntBASIC3.3□□□□□ -1.88
RTL4Q6ZR62 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.3□□□□□ -1.88
RTL4Q6ZR62 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RTL4Q6ZR62 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RTL4Q6ZR62 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.3□□□□□ -1.88
RTL4Q6ZR62 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.3□□□□□ -1.88
RTL4Q6ZR62 AC244258.1-201ENST00000637553 1071 ntBASIC3.3□□□□□ -1.88
RTL4Q6ZR62 AC110774.1-201ENST00000623567 2018 ntBASIC3.3□□□□□ -1.88
RTL4Q6ZR62 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RTL4Q6ZR62 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.3□□□□□ -1.88
RTL4Q6ZR62 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.3□□□□□ -1.88
RTL4Q6ZR62 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RTL4Q6ZR62 AL365440.1-201ENST00000436135 2167 ntBASIC3.29□□□□□ -1.88
RTL4Q6ZR62 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RTL4Q6ZR62 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.29□□□□□ -1.88
RTL4Q6ZR62 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RTL4Q6ZR62 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RTL4Q6ZR62 RNA5SP235-201ENST00000365411 114 ntBASIC3.29□□□□□ -1.88
RTL4Q6ZR62 AC004022.2-201ENST00000413824 193 ntBASIC3.29□□□□□ -1.88
RTL4Q6ZR62 AC008065.1-201ENST00000428525 348 ntBASIC3.29□□□□□ -1.88
RTL4Q6ZR62 AL662791.1-201ENST00000441992 928 ntBASIC3.29□□□□□ -1.88
RTL4Q6ZR62 XKRY2-201ENST00000442362 1093 ntBASIC3.29□□□□□ -1.88
RTL4Q6ZR62 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.29□□□□□ -1.88
RTL4Q6ZR62 ACTG1P13-201ENST00000486987 1043 ntBASIC3.29□□□□□ -1.88
RTL4Q6ZR62 RPL30P11-201ENST00000495304 339 ntBASIC3.29□□□□□ -1.88
RTL4Q6ZR62 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.29□□□□□ -1.88
RTL4Q6ZR62 AC010285.3-201ENST00000511668 676 ntBASIC3.29□□□□□ -1.88
RTL4Q6ZR62 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.29□□□□□ -1.88
RTL4Q6ZR62 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.29□□□□□ -1.88
RTL4Q6ZR62 RN7SKP13-201ENST00000515933 244 ntBASIC3.29□□□□□ -1.88
RTL4Q6ZR62 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.29□□□□□ -1.88
RTL4Q6ZR62 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.29□□□□□ -1.88
RTL4Q6ZR62 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.29□□□□□ -1.88
RTL4Q6ZR62 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
RTL4Q6ZR62 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.29□□□□□ -1.88
RTL4Q6ZR62 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.29□□□□□ -1.88
RTL4Q6ZR62 AC024220.1-201ENST00000603675 484 ntBASIC3.29□□□□□ -1.88
RTL4Q6ZR62 AC084757.4-201ENST00000616350 526 ntBASIC3.29□□□□□ -1.88
RTL4Q6ZR62 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.29□□□□□ -1.88
RTL4Q6ZR62 AC018816.2-201ENST00000621460 353 ntBASIC3.29□□□□□ -1.88
RTL4Q6ZR62 AC244100.1-202ENST00000621554 382 ntBASIC3.29□□□□□ -1.88
RTL4Q6ZR62 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.29□□□□□ -1.88
RTL4Q6ZR62 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.28□□□□□ -1.88
RTL4Q6ZR62 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
RTL4Q6ZR62 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RTL4Q6ZR62 AL136164.4-201ENST00000625013 2135 ntBASIC3.28□□□□□ -1.88
RTL4Q6ZR62 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
RTL4Q6ZR62 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RTL4Q6ZR62 AC234772.1-201ENST00000377927 937 ntBASIC3.28□□□□□ -1.88
RTL4Q6ZR62 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
RTL4Q6ZR62 AL136116.1-201ENST00000403591 381 ntBASIC3.28□□□□□ -1.88
RTL4Q6ZR62 RPL23AP47-201ENST00000408017 460 ntBASIC3.28□□□□□ -1.88
RTL4Q6ZR62 AC004987.3-201ENST00000413879 771 ntBASIC3.28□□□□□ -1.88
RTL4Q6ZR62 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.28□□□□□ -1.88
RTL4Q6ZR62 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.28□□□□□ -1.88
RTL4Q6ZR62 AL031736.2-201ENST00000426573 787 ntBASIC3.28□□□□□ -1.88
RTL4Q6ZR62 TRIAP1P1-201ENST00000427062 225 ntBASIC3.28□□□□□ -1.88
RTL4Q6ZR62 AL158071.1-201ENST00000430315 461 ntBASIC3.28□□□□□ -1.88
RTL4Q6ZR62 TRIM60P13-201ENST00000432350 1283 ntBASIC3.28□□□□□ -1.88
RTL4Q6ZR62 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.28□□□□□ -1.88
RTL4Q6ZR62 ELOCP11-201ENST00000436690 332 ntBASIC3.28□□□□□ -1.88
RTL4Q6ZR62 AC006994.1-201ENST00000438212 839 ntBASIC3.28□□□□□ -1.88
RTL4Q6ZR62 AC074367.1-201ENST00000438685 1125 ntBASIC3.28□□□□□ -1.88
RTL4Q6ZR62 ELOCP16-201ENST00000444494 332 ntBASIC3.28□□□□□ -1.88
RTL4Q6ZR62 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.28□□□□□ -1.88
RTL4Q6ZR62 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RTL4Q6ZR62 U3.44-201ENST00000458938 192 ntBASIC3.28□□□□□ -1.88
RTL4Q6ZR62 RPL21P104-201ENST00000464143 478 ntBASIC3.28□□□□□ -1.88
RTL4Q6ZR62 CYCSP20-201ENST00000473154 315 ntBASIC3.28□□□□□ -1.88
RTL4Q6ZR62 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.28□□□□□ -1.88
RTL4Q6ZR62 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.28□□□□□ -1.88
RTL4Q6ZR62 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.28□□□□□ -1.88
RTL4Q6ZR62 RN7SKP234-201ENST00000517173 224 ntBASIC3.28□□□□□ -1.88
RTL4Q6ZR62 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.28□□□□□ -1.88
RTL4Q6ZR62 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.28□□□□□ -1.88
RTL4Q6ZR62 CENPUP2-201ENST00000555897 1186 ntBASIC3.28□□□□□ -1.88
RTL4Q6ZR62 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.28□□□□□ -1.88
RTL4Q6ZR62 CBX3P2-202ENST00000583365 535 ntBASIC3.28□□□□□ -1.88
RTL4Q6ZR62 MIR3922-201ENST00000585192 84 ntBASIC3.28□□□□□ -1.88
RTL4Q6ZR62 CCDC58P3-201ENST00000590792 430 ntBASIC3.28□□□□□ -1.88
RTL4Q6ZR62 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.28□□□□□ -1.88
RTL4Q6ZR62 AC069304.3-201ENST00000603938 1084 ntBASIC3.28□□□□□ -1.88
RTL4Q6ZR62 U6.48-201ENST00000618523 106 ntBASIC3.28□□□□□ -1.88
RTL4Q6ZR62 AC012314.7-201ENST00000619693 93 ntBASIC3.28□□□□□ -1.88
RTL4Q6ZR62 AC015967.1-201ENST00000619893 476 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms