Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.82□□□□□ -1.8
C11orf88Q6PI97 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.82□□□□□ -1.8
C11orf88Q6PI97 AL390838.2-201ENST00000602394 274 ntBASIC3.82□□□□□ -1.8
C11orf88Q6PI97 AL451044.1-201ENST00000604867 238 ntBASIC3.82□□□□□ -1.8
C11orf88Q6PI97 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.82□□□□□ -1.8
C11orf88Q6PI97 AF129408.1-201ENST00000608767 431 ntBASIC3.82□□□□□ -1.8
C11orf88Q6PI97 AC233309.1-201ENST00000619522 751 ntBASIC3.82□□□□□ -1.8
C11orf88Q6PI97 AC084824.4-201ENST00000620106 731 ntBASIC3.82□□□□□ -1.8
C11orf88Q6PI97 AL590240.3-201ENST00000621416 943 ntBASIC3.82□□□□□ -1.8
C11orf88Q6PI97 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.82□□□□□ -1.8
C11orf88Q6PI97 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
C11orf88Q6PI97 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.82□□□□□ -1.8
C11orf88Q6PI97 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
C11orf88Q6PI97 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
C11orf88Q6PI97 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
C11orf88Q6PI97 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.82□□□□□ -1.8
C11orf88Q6PI97 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
C11orf88Q6PI97 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.81□□□□□ -1.8
C11orf88Q6PI97 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
C11orf88Q6PI97 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.81□□□□□ -1.8
C11orf88Q6PI97 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
C11orf88Q6PI97 ZNF962P-201ENST00000443465 3140 ntBASIC3.81□□□□□ -1.8
C11orf88Q6PI97 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.81□□□□□ -1.8
C11orf88Q6PI97 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
C11orf88Q6PI97 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
C11orf88Q6PI97 RNU5D-1-201ENST00000363299 116 ntBASIC3.81□□□□□ -1.8
C11orf88Q6PI97 snoZ40.1-201ENST00000364540 72 ntBASIC3.81□□□□□ -1.8
C11orf88Q6PI97 RNU6-878P-201ENST00000384578 110 ntBASIC3.81□□□□□ -1.8
C11orf88Q6PI97 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
C11orf88Q6PI97 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.81□□□□□ -1.8
C11orf88Q6PI97 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.81□□□□□ -1.8
C11orf88Q6PI97 LUZP4P1-201ENST00000415420 344 ntBASIC3.81□□□□□ -1.8
C11orf88Q6PI97 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.81□□□□□ -1.8
C11orf88Q6PI97 AC007435.1-201ENST00000421086 415 ntBASIC3.81□□□□□ -1.8
C11orf88Q6PI97 RPF2P1-201ENST00000424137 906 ntBASIC3.81□□□□□ -1.8
C11orf88Q6PI97 AC092017.2-201ENST00000427600 362 ntBASIC3.81□□□□□ -1.8
C11orf88Q6PI97 HMGB3P6-201ENST00000444896 598 ntBASIC3.81□□□□□ -1.8
C11orf88Q6PI97 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.81□□□□□ -1.8
C11orf88Q6PI97 SLC31A1P1-201ENST00000451221 567 ntBASIC3.81□□□□□ -1.8
C11orf88Q6PI97 snoU13.1-201ENST00000459157 104 ntBASIC3.81□□□□□ -1.8
C11orf88Q6PI97 AC053481.1-201ENST00000467217 306 ntBASIC3.81□□□□□ -1.8
C11orf88Q6PI97 HMGB1P25-201ENST00000468402 607 ntBASIC3.81□□□□□ -1.8
C11orf88Q6PI97 AC093267.1-201ENST00000489176 961 ntBASIC3.81□□□□□ -1.8
C11orf88Q6PI97 RPL23AP72-201ENST00000492447 435 ntBASIC3.81□□□□□ -1.8
C11orf88Q6PI97 SCARNA22-201ENST00000503991 125 ntBASIC3.81□□□□□ -1.8
C11orf88Q6PI97 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.81□□□□□ -1.8
C11orf88Q6PI97 AC010625.1-201ENST00000511296 403 ntBASIC3.81□□□□□ -1.8
C11orf88Q6PI97 RN7SKP13-201ENST00000515933 244 ntBASIC3.81□□□□□ -1.8
C11orf88Q6PI97 RNA5SP468-201ENST00000516782 93 ntBASIC3.81□□□□□ -1.8
C11orf88Q6PI97 C1GALT1P3-201ENST00000522049 819 ntBASIC3.81□□□□□ -1.8
C11orf88Q6PI97 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.81□□□□□ -1.8
C11orf88Q6PI97 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.81□□□□□ -1.8
C11orf88Q6PI97 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.81□□□□□ -1.8
C11orf88Q6PI97 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.81□□□□□ -1.8
C11orf88Q6PI97 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC3.81□□□□□ -1.8
C11orf88Q6PI97 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC3.81□□□□□ -1.8
C11orf88Q6PI97 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC3.81□□□□□ -1.8
C11orf88Q6PI97 MIR5047-201ENST00000579212 100 ntBASIC3.81□□□□□ -1.8
C11orf88Q6PI97 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC3.81□□□□□ -1.8
C11orf88Q6PI97 MIR4697-201ENST00000582977 78 ntBASIC3.81□□□□□ -1.8
C11orf88Q6PI97 KPNA2P3-201ENST00000584190 848 ntBASIC3.81□□□□□ -1.8
C11orf88Q6PI97 BNIP3P27-201ENST00000599991 412 ntBASIC3.81□□□□□ -1.8
C11orf88Q6PI97 AC008782.1-201ENST00000603386 430 ntBASIC3.81□□□□□ -1.8
C11orf88Q6PI97 AL121652.1-201ENST00000608851 448 ntBASIC3.81□□□□□ -1.8
C11orf88Q6PI97 PART1_2.1-201ENST00000612397 250 ntBASIC3.81□□□□□ -1.8
C11orf88Q6PI97 MIR6853-201ENST00000619642 74 ntBASIC3.81□□□□□ -1.8
C11orf88Q6PI97 AC123767.1-202ENST00000620407 817 ntBASIC3.81□□□□□ -1.8
C11orf88Q6PI97 AC010872.1-201ENST00000624225 675 ntBASIC3.81□□□□□ -1.8
C11orf88Q6PI97 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.81□□□□□ -1.8
C11orf88Q6PI97 NXPH1-205ENST00000602349 1953 ntBASIC3.81□□□□□ -1.8
C11orf88Q6PI97 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
C11orf88Q6PI97 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.81□□□□□ -1.8
C11orf88Q6PI97 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.81□□□□□ -1.8
C11orf88Q6PI97 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
C11orf88Q6PI97 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
C11orf88Q6PI97 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
C11orf88Q6PI97 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.81□□□□□ -1.8
C11orf88Q6PI97 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
C11orf88Q6PI97 CASC19-261ENST00000641853 1638 ntBASIC3.81□□□□□ -1.8
C11orf88Q6PI97 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.81□□□□□ -1.8
C11orf88Q6PI97 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
C11orf88Q6PI97 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
C11orf88Q6PI97 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
C11orf88Q6PI97 RNA5SP388-201ENST00000362584 119 ntBASIC3.8□□□□□ -1.8
C11orf88Q6PI97 SNORA71.2-201ENST00000364941 134 ntBASIC3.8□□□□□ -1.8
C11orf88Q6PI97 RNA5SP151-201ENST00000365632 117 ntBASIC3.8□□□□□ -1.8
C11orf88Q6PI97 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
C11orf88Q6PI97 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
C11orf88Q6PI97 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
C11orf88Q6PI97 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
C11orf88Q6PI97 SNORD116-12-201ENST00000384468 92 ntBASIC3.8□□□□□ -1.8
C11orf88Q6PI97 MIR591-201ENST00000385290 95 ntBASIC3.8□□□□□ -1.8
C11orf88Q6PI97 RNU1-82P-201ENST00000390851 165 ntBASIC3.8□□□□□ -1.8
C11orf88Q6PI97 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.8□□□□□ -1.8
C11orf88Q6PI97 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.8□□□□□ -1.8
C11orf88Q6PI97 COX6CP17-201ENST00000421389 185 ntBASIC3.8□□□□□ -1.8
C11orf88Q6PI97 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.8□□□□□ -1.8
C11orf88Q6PI97 OSTCP5-201ENST00000425293 453 ntBASIC3.8□□□□□ -1.8
C11orf88Q6PI97 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.8□□□□□ -1.8
C11orf88Q6PI97 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms