Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
ARFGEF3Q5TH69 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
ARFGEF3Q5TH69 AC062016.1-201ENST00000355719 319 ntBASIC2.56□□□□□ -2
ARFGEF3Q5TH69 SNORD56.3-201ENST00000363507 71 ntBASIC2.56□□□□□ -2
ARFGEF3Q5TH69 RNU6-146P-201ENST00000384602 108 ntBASIC2.56□□□□□ -2
ARFGEF3Q5TH69 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC2.56□□□□□ -2
ARFGEF3Q5TH69 RNF19BPX-201ENST00000426224 625 ntBASIC2.56□□□□□ -2
ARFGEF3Q5TH69 MTND2P2-201ENST00000434633 945 ntBASIC2.56□□□□□ -2
ARFGEF3Q5TH69 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.56□□□□□ -2
ARFGEF3Q5TH69 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.56□□□□□ -2
ARFGEF3Q5TH69 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC2.56□□□□□ -2
ARFGEF3Q5TH69 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.56□□□□□ -2
ARFGEF3Q5TH69 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.56□□□□□ -2
ARFGEF3Q5TH69 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.56□□□□□ -2
ARFGEF3Q5TH69 GTF3AP2-201ENST00000557014 266 ntBASIC2.56□□□□□ -2
ARFGEF3Q5TH69 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC2.56□□□□□ -2
ARFGEF3Q5TH69 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.56□□□□□ -2
ARFGEF3Q5TH69 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC2.56□□□□□ -2
ARFGEF3Q5TH69 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.56□□□□□ -2
ARFGEF3Q5TH69 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC2.56□□□□□ -2
ARFGEF3Q5TH69 ATP1B3P1-201ENST00000605365 821 ntBASIC2.56□□□□□ -2
ARFGEF3Q5TH69 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC2.56□□□□□ -2
ARFGEF3Q5TH69 MIR7106-201ENST00000612419 65 ntBASIC2.56□□□□□ -2
ARFGEF3Q5TH69 AC008121.2-201ENST00000614647 523 ntBASIC2.56□□□□□ -2
ARFGEF3Q5TH69 SRP72P2-201ENST00000344851 1979 ntBASIC2.55□□□□□ -2
ARFGEF3Q5TH69 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
ARFGEF3Q5TH69 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
ARFGEF3Q5TH69 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
ARFGEF3Q5TH69 PWAR6-201ENST00000552334 4618 ntBASIC2.55□□□□□ -2
ARFGEF3Q5TH69 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
ARFGEF3Q5TH69 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.55□□□□□ -2
ARFGEF3Q5TH69 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.55□□□□□ -2
ARFGEF3Q5TH69 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.55□□□□□ -2
ARFGEF3Q5TH69 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC2.55□□□□□ -2
ARFGEF3Q5TH69 HMGB3P11-201ENST00000440127 604 ntBASIC2.55□□□□□ -2
ARFGEF3Q5TH69 AL831737.1-201ENST00000441288 271 ntBASIC2.55□□□□□ -2
ARFGEF3Q5TH69 RPS24P13-201ENST00000442520 397 ntBASIC2.55□□□□□ -2
ARFGEF3Q5TH69 AC069540.1-201ENST00000446320 988 ntBASIC2.55□□□□□ -2
ARFGEF3Q5TH69 AC140076.1-201ENST00000449897 361 ntBASIC2.55□□□□□ -2
ARFGEF3Q5TH69 AC006539.3-201ENST00000454258 129 ntBASIC2.55□□□□□ -2
ARFGEF3Q5TH69 MTND6P32-201ENST00000457611 483 ntBASIC2.55□□□□□ -2
ARFGEF3Q5TH69 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC2.55□□□□□ -2
ARFGEF3Q5TH69 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC2.55□□□□□ -2
ARFGEF3Q5TH69 RPL23AP94-201ENST00000512518 302 ntBASIC2.55□□□□□ -2
ARFGEF3Q5TH69 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC2.55□□□□□ -2
ARFGEF3Q5TH69 AC034105.3-201ENST00000565294 442 ntBASIC2.55□□□□□ -2
ARFGEF3Q5TH69 AL365503.1-201ENST00000605247 905 ntBASIC2.55□□□□□ -2
ARFGEF3Q5TH69 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.55□□□□□ -2
ARFGEF3Q5TH69 RFC1-217ENST00000639695 867 ntTSL 5 BASIC2.55□□□□□ -2
ARFGEF3Q5TH69 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
ARFGEF3Q5TH69 AC092079.1-201ENST00000558620 1985 ntBASIC2.55□□□□□ -2
ARFGEF3Q5TH69 SKINT1L-201ENST00000401057 817 ntBASIC2.54□□□□□ -2
ARFGEF3Q5TH69 RNA5SP239-201ENST00000410218 129 ntBASIC2.54□□□□□ -2
ARFGEF3Q5TH69 AL592148.1-201ENST00000413568 445 ntBASIC2.54□□□□□ -2
ARFGEF3Q5TH69 AL159169.1-201ENST00000421119 127 ntBASIC2.54□□□□□ -2
ARFGEF3Q5TH69 AC022022.1-201ENST00000430304 178 ntBASIC2.54□□□□□ -2
ARFGEF3Q5TH69 RAB9AP5-201ENST00000437794 597 ntBASIC2.54□□□□□ -2
ARFGEF3Q5TH69 AC107083.1-201ENST00000439643 279 ntBASIC2.54□□□□□ -2
ARFGEF3Q5TH69 RAB9AP2-201ENST00000443911 597 ntBASIC2.54□□□□□ -2
ARFGEF3Q5TH69 AC016696.1-201ENST00000446949 318 ntBASIC2.54□□□□□ -2
ARFGEF3Q5TH69 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC2.54□□□□□ -2
ARFGEF3Q5TH69 RPS3AP43-201ENST00000479743 781 ntBASIC2.54□□□□□ -2
ARFGEF3Q5TH69 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.54□□□□□ -2
ARFGEF3Q5TH69 AC092045.1-201ENST00000495716 1231 ntBASIC2.54□□□□□ -2
ARFGEF3Q5TH69 AC068657.1-201ENST00000520807 306 ntBASIC2.54□□□□□ -2
ARFGEF3Q5TH69 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC2.54□□□□□ -2
ARFGEF3Q5TH69 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC2.54□□□□□ -2
ARFGEF3Q5TH69 CBX3P5-201ENST00000552017 521 ntBASIC2.54□□□□□ -2
ARFGEF3Q5TH69 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.54□□□□□ -2
ARFGEF3Q5TH69 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.54□□□□□ -2
ARFGEF3Q5TH69 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC2.54□□□□□ -2
ARFGEF3Q5TH69 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ARFGEF3Q5TH69 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
ARFGEF3Q5TH69 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ARFGEF3Q5TH69 EXOC5P1-201ENST00000510543 1969 ntBASIC2.54□□□□□ -2
ARFGEF3Q5TH69 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ARFGEF3Q5TH69 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ARFGEF3Q5TH69 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.54□□□□□ -2
ARFGEF3Q5TH69 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC2.54□□□□□ -2
ARFGEF3Q5TH69 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.54□□□□□ -2
ARFGEF3Q5TH69 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC2.54□□□□□ -2
ARFGEF3Q5TH69 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC2.54□□□□□ -2
ARFGEF3Q5TH69 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.54□□□□□ -2
ARFGEF3Q5TH69 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.54□□□□□ -2
ARFGEF3Q5TH69 RNU7-170P-201ENST00000459303 61 ntBASIC2.54□□□□□ -2
ARFGEF3Q5TH69 AC068305.1-201ENST00000497406 726 ntBASIC2.54□□□□□ -2
ARFGEF3Q5TH69 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC2.54□□□□□ -2
ARFGEF3Q5TH69 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.54□□□□□ -2
ARFGEF3Q5TH69 AP005205.1-201ENST00000563503 508 ntBASIC2.54□□□□□ -2
ARFGEF3Q5TH69 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.54□□□□□ -2
ARFGEF3Q5TH69 VN1R90P-201ENST00000595717 726 ntBASIC2.54□□□□□ -2
ARFGEF3Q5TH69 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC2.54□□□□□ -2
ARFGEF3Q5TH69 PRELID3BP8-201ENST00000604148 295 ntBASIC2.54□□□□□ -2
ARFGEF3Q5TH69 AC099506.2-201ENST00000623074 221 ntBASIC2.54□□□□□ -2
ARFGEF3Q5TH69 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
ARFGEF3Q5TH69 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
ARFGEF3Q5TH69 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
ARFGEF3Q5TH69 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
ARFGEF3Q5TH69 Y_RNA.62-201ENST00000362840 99 ntBASIC2.53□□□□□ -2
ARFGEF3Q5TH69 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms