Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 ELOCP15-201ENST00000442090 332 ntBASIC5.15□□□□□ -1.59
LONRF3Q496Y0 MTCO1P48-201ENST00000448024 1096 ntBASIC5.15□□□□□ -1.59
LONRF3Q496Y0 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC5.15□□□□□ -1.59
LONRF3Q496Y0 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC5.15□□□□□ -1.59
LONRF3Q496Y0 AC078817.1-201ENST00000492623 435 ntBASIC5.15□□□□□ -1.59
LONRF3Q496Y0 OR4G11P-201ENST00000492842 939 ntBASIC5.15□□□□□ -1.59
LONRF3Q496Y0 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC5.15□□□□□ -1.59
LONRF3Q496Y0 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC5.15□□□□□ -1.59
LONRF3Q496Y0 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC5.15□□□□□ -1.59
LONRF3Q496Y0 MTCYBP16-201ENST00000509187 1129 ntBASIC5.15□□□□□ -1.59
LONRF3Q496Y0 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
LONRF3Q496Y0 AC109445.1-201ENST00000512356 383 ntBASIC5.15□□□□□ -1.59
LONRF3Q496Y0 AC023141.12-201ENST00000512399 199 ntBASIC5.15□□□□□ -1.59
LONRF3Q496Y0 MTCO1P30-201ENST00000515244 580 ntBASIC5.15□□□□□ -1.59
LONRF3Q496Y0 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC5.15□□□□□ -1.59
LONRF3Q496Y0 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC5.15□□□□□ -1.59
LONRF3Q496Y0 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC5.15□□□□□ -1.59
LONRF3Q496Y0 AP000790.1-201ENST00000528891 737 ntBASIC5.15□□□□□ -1.59
LONRF3Q496Y0 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.15□□□□□ -1.59
LONRF3Q496Y0 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC5.15□□□□□ -1.59
LONRF3Q496Y0 UBE2NP1-201ENST00000545592 458 ntBASIC5.15□□□□□ -1.59
LONRF3Q496Y0 AC090502.2-201ENST00000549267 280 ntBASIC5.15□□□□□ -1.59
LONRF3Q496Y0 AL352979.3-201ENST00000553515 247 ntBASIC5.15□□□□□ -1.59
LONRF3Q496Y0 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC5.15□□□□□ -1.59
LONRF3Q496Y0 AC091178.1-203ENST00000584586 279 ntBASIC5.15□□□□□ -1.59
LONRF3Q496Y0 VN1R79P-201ENST00000593540 513 ntBASIC5.15□□□□□ -1.59
LONRF3Q496Y0 RPL12P25-202ENST00000598100 674 ntBASIC5.15□□□□□ -1.59
LONRF3Q496Y0 AC068790.2-201ENST00000602601 557 ntBASIC5.15□□□□□ -1.59
LONRF3Q496Y0 AC090181.2-201ENST00000602975 672 ntBASIC5.15□□□□□ -1.59
LONRF3Q496Y0 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC5.15□□□□□ -1.59
LONRF3Q496Y0 AP002360.3-201ENST00000607673 710 ntBASIC5.15□□□□□ -1.59
LONRF3Q496Y0 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.15□□□□□ -1.59
LONRF3Q496Y0 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
LONRF3Q496Y0 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.59
LONRF3Q496Y0 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.15□□□□□ -1.59
LONRF3Q496Y0 MAPK10-286ENST00000641208 8747 ntBASIC5.15□□□□□ -1.59
LONRF3Q496Y0 AC109315.1-201ENST00000584143 1347 ntBASIC5.15□□□□□ -1.59
LONRF3Q496Y0 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
LONRF3Q496Y0 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
LONRF3Q496Y0 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.14□□□□□ -1.59
LONRF3Q496Y0 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
LONRF3Q496Y0 AC005539.1-201ENST00000443768 1479 ntBASIC5.14□□□□□ -1.59
LONRF3Q496Y0 AL390862.1-201ENST00000635467 1469 ntBASIC5.14□□□□□ -1.59
LONRF3Q496Y0 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
LONRF3Q496Y0 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LONRF3Q496Y0 OR4K15-201ENST00000305051 1216 ntBASIC5.14□□□□□ -1.59
LONRF3Q496Y0 RNU6-251P-201ENST00000363235 104 ntBASIC5.14□□□□□ -1.59
LONRF3Q496Y0 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.14□□□□□ -1.59
LONRF3Q496Y0 Y_RNA.201-201ENST00000364052 96 ntBASIC5.14□□□□□ -1.59
LONRF3Q496Y0 SNORD113.2-201ENST00000364166 89 ntBASIC5.14□□□□□ -1.59
LONRF3Q496Y0 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LONRF3Q496Y0 RNA5SP372-201ENST00000390836 115 ntBASIC5.14□□□□□ -1.59
LONRF3Q496Y0 RPS3AP23-201ENST00000401762 784 ntBASIC5.14□□□□□ -1.59
LONRF3Q496Y0 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.14□□□□□ -1.59
LONRF3Q496Y0 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LONRF3Q496Y0 RPL31P2-201ENST00000413849 377 ntBASIC5.14□□□□□ -1.59
LONRF3Q496Y0 AC009237.10-201ENST00000414112 510 ntBASIC5.14□□□□□ -1.59
LONRF3Q496Y0 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.14□□□□□ -1.59
LONRF3Q496Y0 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC5.14□□□□□ -1.59
LONRF3Q496Y0 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC5.14□□□□□ -1.59
LONRF3Q496Y0 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.14□□□□□ -1.59
LONRF3Q496Y0 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC5.14□□□□□ -1.59
LONRF3Q496Y0 HMGN2P21-201ENST00000447764 270 ntBASIC5.14□□□□□ -1.59
LONRF3Q496Y0 TPT1P12-201ENST00000448968 492 ntBASIC5.14□□□□□ -1.59
LONRF3Q496Y0 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.14□□□□□ -1.59
LONRF3Q496Y0 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC5.14□□□□□ -1.59
LONRF3Q496Y0 TRBV26-201ENST00000456572 344 ntBASIC5.14□□□□□ -1.59
LONRF3Q496Y0 AC090013.1-201ENST00000485147 480 ntBASIC5.14□□□□□ -1.59
LONRF3Q496Y0 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC5.14□□□□□ -1.59
LONRF3Q496Y0 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC5.14□□□□□ -1.59
LONRF3Q496Y0 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.14□□□□□ -1.59
LONRF3Q496Y0 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.14□□□□□ -1.59
LONRF3Q496Y0 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.14□□□□□ -1.59
LONRF3Q496Y0 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.14□□□□□ -1.59
LONRF3Q496Y0 AP001781.1-201ENST00000530977 207 ntBASIC5.14□□□□□ -1.59
LONRF3Q496Y0 AC009643.1-201ENST00000532030 391 ntBASIC5.14□□□□□ -1.59
LONRF3Q496Y0 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.14□□□□□ -1.59
LONRF3Q496Y0 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.14□□□□□ -1.59
LONRF3Q496Y0 ISCA1P3-201ENST00000577104 373 ntBASIC5.14□□□□□ -1.59
LONRF3Q496Y0 MIR5096-201ENST00000583713 70 ntBASIC5.14□□□□□ -1.59
LONRF3Q496Y0 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.14□□□□□ -1.59
LONRF3Q496Y0 VN1R90P-201ENST00000595717 726 ntBASIC5.14□□□□□ -1.59
LONRF3Q496Y0 AL590229.1-201ENST00000603497 542 ntBASIC5.14□□□□□ -1.59
LONRF3Q496Y0 AC009220.3-201ENST00000604318 586 ntBASIC5.14□□□□□ -1.59
LONRF3Q496Y0 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC5.14□□□□□ -1.59
LONRF3Q496Y0 AC091965.5-201ENST00000624785 342 ntBASIC5.14□□□□□ -1.59
LONRF3Q496Y0 U3.53-201ENST00000628922 216 ntBASIC5.14□□□□□ -1.59
LONRF3Q496Y0 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
LONRF3Q496Y0 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
LONRF3Q496Y0 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
LONRF3Q496Y0 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.14□□□□□ -1.59
LONRF3Q496Y0 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LONRF3Q496Y0 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
LONRF3Q496Y0 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.13□□□□□ -1.59
LONRF3Q496Y0 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
LONRF3Q496Y0 AC139713.2-215ENST00000641428 5037 ntBASIC5.13□□□□□ -1.59
LONRF3Q496Y0 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
LONRF3Q496Y0 AC021146.4-201ENST00000309229 279 ntBASIC5.13□□□□□ -1.59
LONRF3Q496Y0 SUGT1P1-201ENST00000379514 476 ntBASIC5.13□□□□□ -1.59
LONRF3Q496Y0 RNU6-657P-201ENST00000383904 107 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 217.5 ms