Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 MIR93-201ENST00000385024 80 ntBASIC3.63□□□□□ -1.83
CX3CL1P78423 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CX3CL1P78423 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
CX3CL1P78423 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.63□□□□□ -1.83
CX3CL1P78423 FNDC3CP-201ENST00000420795 1155 ntBASIC3.63□□□□□ -1.83
CX3CL1P78423 RPL7P30-201ENST00000420888 709 ntBASIC3.63□□□□□ -1.83
CX3CL1P78423 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CX3CL1P78423 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.63□□□□□ -1.83
CX3CL1P78423 AL035407.1-201ENST00000429211 571 ntBASIC3.63□□□□□ -1.83
CX3CL1P78423 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CX3CL1P78423 ZYG11AP1-201ENST00000430329 837 ntBASIC3.63□□□□□ -1.83
CX3CL1P78423 AL445567.1-201ENST00000439121 144 ntBASIC3.63□□□□□ -1.83
CX3CL1P78423 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.63□□□□□ -1.83
CX3CL1P78423 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.63□□□□□ -1.83
CX3CL1P78423 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.63□□□□□ -1.83
CX3CL1P78423 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.63□□□□□ -1.83
CX3CL1P78423 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.63□□□□□ -1.83
CX3CL1P78423 AC009963.2-201ENST00000453431 138 ntBASIC3.63□□□□□ -1.83
CX3CL1P78423 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.63□□□□□ -1.83
CX3CL1P78423 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.63□□□□□ -1.83
CX3CL1P78423 RNU7-136P-201ENST00000458819 69 ntBASIC3.63□□□□□ -1.83
CX3CL1P78423 AC146507.1-201ENST00000468335 354 ntBASIC3.63□□□□□ -1.83
CX3CL1P78423 BZW1P2-201ENST00000473537 826 ntBASIC3.63□□□□□ -1.83
CX3CL1P78423 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.63□□□□□ -1.83
CX3CL1P78423 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.63□□□□□ -1.83
CX3CL1P78423 PTGES3P3-201ENST00000511479 482 ntBASIC3.63□□□□□ -1.83
CX3CL1P78423 MTCYBP43-201ENST00000513621 740 ntBASIC3.63□□□□□ -1.83
CX3CL1P78423 RNU6-759P-201ENST00000516740 103 ntBASIC3.63□□□□□ -1.83
CX3CL1P78423 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.63□□□□□ -1.83
CX3CL1P78423 AC090151.1-201ENST00000520784 730 ntBASIC3.63□□□□□ -1.83
CX3CL1P78423 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.63□□□□□ -1.83
CX3CL1P78423 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.63□□□□□ -1.83
CX3CL1P78423 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC3.63□□□□□ -1.83
CX3CL1P78423 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC3.63□□□□□ -1.83
CX3CL1P78423 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.63□□□□□ -1.83
CX3CL1P78423 AC135628.1-201ENST00000568867 534 ntBASIC3.63□□□□□ -1.83
CX3CL1P78423 KPNA2P3-201ENST00000584190 848 ntBASIC3.63□□□□□ -1.83
CX3CL1P78423 AC091178.1-203ENST00000584586 279 ntBASIC3.63□□□□□ -1.83
CX3CL1P78423 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CX3CL1P78423 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.63□□□□□ -1.83
CX3CL1P78423 VN1R92P-201ENST00000598511 928 ntBASIC3.63□□□□□ -1.83
CX3CL1P78423 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.63□□□□□ -1.83
CX3CL1P78423 AL109653.1-201ENST00000603091 248 ntBASIC3.63□□□□□ -1.83
CX3CL1P78423 AC004987.4-201ENST00000603383 338 ntBASIC3.63□□□□□ -1.83
CX3CL1P78423 AC024560.3-201ENST00000608482 349 ntBASIC3.63□□□□□ -1.83
CX3CL1P78423 AC073968.1-201ENST00000618594 637 ntBASIC3.63□□□□□ -1.83
CX3CL1P78423 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
CX3CL1P78423 AC010608.2-201ENST00000624830 470 ntBASIC3.63□□□□□ -1.83
CX3CL1P78423 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.63□□□□□ -1.83
CX3CL1P78423 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CX3CL1P78423 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CX3CL1P78423 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
CX3CL1P78423 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
CX3CL1P78423 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.63□□□□□ -1.83
CX3CL1P78423 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CX3CL1P78423 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.63□□□□□ -1.83
CX3CL1P78423 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CX3CL1P78423 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
CX3CL1P78423 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CX3CL1P78423 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
CX3CL1P78423 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CX3CL1P78423 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CX3CL1P78423 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CX3CL1P78423 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CX3CL1P78423 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CX3CL1P78423 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CX3CL1P78423 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
CX3CL1P78423 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
CX3CL1P78423 NUP58P1-201ENST00000502546 1738 ntBASIC3.62□□□□□ -1.83
CX3CL1P78423 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CX3CL1P78423 RPL21P132-201ENST00000331267 462 ntBASIC3.62□□□□□ -1.83
CX3CL1P78423 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CX3CL1P78423 RHOT1P2-201ENST00000366423 333 ntBASIC3.62□□□□□ -1.83
CX3CL1P78423 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.62□□□□□ -1.83
CX3CL1P78423 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CX3CL1P78423 Y_RNA.493-201ENST00000384422 102 ntBASIC3.62□□□□□ -1.83
CX3CL1P78423 MT-TC-201ENST00000387405 66 ntBASIC3.62□□□□□ -1.83
CX3CL1P78423 RNA5SP397-201ENST00000391323 118 ntBASIC3.62□□□□□ -1.83
CX3CL1P78423 SDHCP2-201ENST00000398565 501 ntBASIC3.62□□□□□ -1.83
CX3CL1P78423 MTND4LP20-201ENST00000402379 270 ntBASIC3.62□□□□□ -1.83
CX3CL1P78423 AL355379.1-201ENST00000405542 640 ntBASIC3.62□□□□□ -1.83
CX3CL1P78423 MIR1250-201ENST00000408098 113 ntBASIC3.62□□□□□ -1.83
CX3CL1P78423 AC004552.1-201ENST00000419089 348 ntBASIC3.62□□□□□ -1.83
CX3CL1P78423 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CX3CL1P78423 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.62□□□□□ -1.83
CX3CL1P78423 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CX3CL1P78423 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.62□□□□□ -1.83
CX3CL1P78423 AL353748.1-201ENST00000440753 474 ntBASIC3.62□□□□□ -1.83
CX3CL1P78423 OR6C5P-201ENST00000452388 923 ntBASIC3.62□□□□□ -1.83
CX3CL1P78423 RPS26P3-201ENST00000470205 348 ntBASIC3.62□□□□□ -1.83
CX3CL1P78423 BET1P1-201ENST00000482276 359 ntBASIC3.62□□□□□ -1.83
CX3CL1P78423 AC090543.2-201ENST00000483963 348 ntBASIC3.62□□□□□ -1.83
CX3CL1P78423 AC004057.1-201ENST00000485827 348 ntBASIC3.62□□□□□ -1.83
CX3CL1P78423 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.62□□□□□ -1.83
CX3CL1P78423 AC090453.1-201ENST00000495560 436 ntBASIC3.62□□□□□ -1.83
CX3CL1P78423 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.62□□□□□ -1.83
CX3CL1P78423 AC093534.1-201ENST00000504977 132 ntBASIC3.62□□□□□ -1.83
CX3CL1P78423 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.62□□□□□ -1.83
CX3CL1P78423 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.62□□□□□ -1.83
CX3CL1P78423 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms