Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC1.94□□□□□ -2.1
RPS28P62857 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC1.94□□□□□ -2.1
RPS28P62857 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
RPS28P62857 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
RPS28P62857 SNORA6-201ENST00000384033 151 ntBASIC1.94□□□□□ -2.1
RPS28P62857 RNU6-198P-201ENST00000384258 104 ntBASIC1.94□□□□□ -2.1
RPS28P62857 RNU6-1226P-201ENST00000384317 107 ntBASIC1.94□□□□□ -2.1
RPS28P62857 MIR614-201ENST00000385082 90 ntBASIC1.94□□□□□ -2.1
RPS28P62857 RNU6-821P-201ENST00000390995 107 ntBASIC1.94□□□□□ -2.1
RPS28P62857 TAF9BP1-201ENST00000396646 746 ntBASIC1.94□□□□□ -2.1
RPS28P62857 HMGB3P19-201ENST00000403971 560 ntBASIC1.94□□□□□ -2.1
RPS28P62857 RN7SKP213-201ENST00000410746 298 ntBASIC1.94□□□□□ -2.1
RPS28P62857 RPS15AP38-201ENST00000413110 372 ntBASIC1.94□□□□□ -2.1
RPS28P62857 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.94□□□□□ -2.1
RPS28P62857 AC069213.1-202ENST00000417011 810 ntTSL 2 BASIC1.94□□□□□ -2.1
RPS28P62857 RPL18AP14-201ENST00000417685 526 ntBASIC1.94□□□□□ -2.1
RPS28P62857 AL161742.1-201ENST00000418154 584 ntBASIC1.94□□□□□ -2.1
RPS28P62857 USP9YP27-201ENST00000418455 438 ntBASIC1.94□□□□□ -2.1
RPS28P62857 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC1.94□□□□□ -2.1
RPS28P62857 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC1.94□□□□□ -2.1
RPS28P62857 AL358472.1-201ENST00000431295 329 ntBASIC1.94□□□□□ -2.1
RPS28P62857 ARPC3P1-201ENST00000437218 533 ntBASIC1.94□□□□□ -2.1
RPS28P62857 Z99127.2-201ENST00000441426 334 ntBASIC1.94□□□□□ -2.1
RPS28P62857 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC1.94□□□□□ -2.1
RPS28P62857 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC1.94□□□□□ -2.1
RPS28P62857 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC1.94□□□□□ -2.1
RPS28P62857 AC233279.1-201ENST00000455300 423 ntBASIC1.94□□□□□ -2.1
RPS28P62857 RPS23P6-201ENST00000466136 431 ntBASIC1.94□□□□□ -2.1
RPS28P62857 AL133445.1-201ENST00000467051 452 ntBASIC1.94□□□□□ -2.1
RPS28P62857 RN7SL571P-201ENST00000468302 295 ntBASIC1.94□□□□□ -2.1
RPS28P62857 AF305872.1-201ENST00000485217 471 ntBASIC1.94□□□□□ -2.1
RPS28P62857 RPL34P29-201ENST00000491411 325 ntBASIC1.94□□□□□ -2.1
RPS28P62857 AC110792.1-201ENST00000491826 472 ntBASIC1.94□□□□□ -2.1
RPS28P62857 TPT1P3-201ENST00000492841 512 ntBASIC1.94□□□□□ -2.1
RPS28P62857 EIF4EP3-201ENST00000498782 656 ntBASIC1.94□□□□□ -2.1
RPS28P62857 OR5H5P-201ENST00000503164 928 ntBASIC1.94□□□□□ -2.1
RPS28P62857 SCARNA22-201ENST00000503991 125 ntBASIC1.94□□□□□ -2.1
RPS28P62857 AC025459.1-201ENST00000504072 156 ntBASIC1.94□□□□□ -2.1
RPS28P62857 PCNAP1-201ENST00000505363 709 ntBASIC1.94□□□□□ -2.1
RPS28P62857 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC1.94□□□□□ -2.1
RPS28P62857 AC100849.2-201ENST00000518324 519 ntTSL 2 BASIC1.94□□□□□ -2.1
RPS28P62857 AC109329.2-201ENST00000519658 482 ntBASIC1.94□□□□□ -2.1
RPS28P62857 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC1.94□□□□□ -2.1
RPS28P62857 AP003102.1-201ENST00000525638 661 ntBASIC1.94□□□□□ -2.1
RPS28P62857 BRD9P1-201ENST00000529855 560 ntBASIC1.94□□□□□ -2.1
RPS28P62857 AC018630.1-201ENST00000541376 925 ntBASIC1.94□□□□□ -2.1
RPS28P62857 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC1.94□□□□□ -2.1
RPS28P62857 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.94□□□□□ -2.1
RPS28P62857 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC1.94□□□□□ -2.1
RPS28P62857 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC1.94□□□□□ -2.1
RPS28P62857 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC1.94□□□□□ -2.1
RPS28P62857 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC1.94□□□□□ -2.1
RPS28P62857 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC1.94□□□□□ -2.1
RPS28P62857 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC1.94□□□□□ -2.1
RPS28P62857 MIR4732-201ENST00000581873 76 ntBASIC1.94□□□□□ -2.1
RPS28P62857 AC090312.2-201ENST00000582687 378 ntBASIC1.94□□□□□ -2.1
RPS28P62857 AC107982.3-201ENST00000584957 985 ntBASIC1.94□□□□□ -2.1
RPS28P62857 NDUFA3P1-201ENST00000588007 252 ntBASIC1.94□□□□□ -2.1
RPS28P62857 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC1.94□□□□□ -2.1
RPS28P62857 AC015871.2-201ENST00000603605 948 ntBASIC1.94□□□□□ -2.1
RPS28P62857 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.94□□□□□ -2.1
RPS28P62857 AC245884.12-201ENST00000615364 59 ntBASIC1.94□□□□□ -2.1
RPS28P62857 MIR6776-201ENST00000616678 59 ntBASIC1.94□□□□□ -2.1
RPS28P62857 AC243830.3-201ENST00000616810 376 ntBASIC1.94□□□□□ -2.1
RPS28P62857 AC015967.1-201ENST00000619893 476 ntBASIC1.94□□□□□ -2.1
RPS28P62857 AL122023.1-201ENST00000622847 530 ntBASIC1.94□□□□□ -2.1
RPS28P62857 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.94□□□□□ -2.1
RPS28P62857 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
RPS28P62857 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC1.94□□□□□ -2.1
RPS28P62857 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC1.94□□□□□ -2.1
RPS28P62857 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
RPS28P62857 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC1.93□□□□□ -2.1
RPS28P62857 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
RPS28P62857 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
RPS28P62857 AL596028.1-201ENST00000326971 197 ntBASIC1.93□□□□□ -2.1
RPS28P62857 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
RPS28P62857 RAB28P1-201ENST00000411517 641 ntBASIC1.93□□□□□ -2.1
RPS28P62857 AC010385.1-201ENST00000412374 256 ntBASIC1.93□□□□□ -2.1
RPS28P62857 AF274854.1-201ENST00000413236 615 ntBASIC1.93□□□□□ -2.1
RPS28P62857 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC1.93□□□□□ -2.1
RPS28P62857 RPS3P2-201ENST00000421346 701 ntBASIC1.93□□□□□ -2.1
RPS28P62857 DDX39BP1-205ENST00000422507 192 ntBASIC1.93□□□□□ -2.1
RPS28P62857 AC092646.1-201ENST00000427142 901 ntBASIC1.93□□□□□ -2.1
RPS28P62857 FO393419.3-201ENST00000428741 282 ntBASIC1.93□□□□□ -2.1
RPS28P62857 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.93□□□□□ -2.1
RPS28P62857 AL356276.2-201ENST00000435919 558 ntBASIC1.93□□□□□ -2.1
RPS28P62857 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC1.93□□□□□ -2.1
RPS28P62857 PGBD4P3-201ENST00000440731 581 ntBASIC1.93□□□□□ -2.1
RPS28P62857 LINC02344-201ENST00000443576 644 ntTSL 2 BASIC1.93□□□□□ -2.1
RPS28P62857 IFNA11P-201ENST00000446352 526 ntBASIC1.93□□□□□ -2.1
RPS28P62857 DPPA3P1-201ENST00000448050 469 ntBASIC1.93□□□□□ -2.1
RPS28P62857 AC115115.1-201ENST00000449927 248 ntBASIC1.93□□□□□ -2.1
RPS28P62857 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC1.93□□□□□ -2.1
RPS28P62857 PNPLA4P1-201ENST00000458328 305 ntBASIC1.93□□□□□ -2.1
RPS28P62857 RPL31P41-201ENST00000477967 372 ntBASIC1.93□□□□□ -2.1
RPS28P62857 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC1.93□□□□□ -2.1
RPS28P62857 AC090543.1-201ENST00000492168 485 ntBASIC1.93□□□□□ -2.1
RPS28P62857 AC009567.2-201ENST00000502989 349 ntBASIC1.93□□□□□ -2.1
RPS28P62857 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC1.93□□□□□ -2.1
RPS28P62857 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms