Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 MIR5004-201ENST00000579078 107 ntBASIC3.24□□□□□ -1.89
AP1S1P61966 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.24□□□□□ -1.89
AP1S1P61966 AC012468.1-201ENST00000604888 430 ntBASIC3.24□□□□□ -1.89
AP1S1P61966 AC015849.2-201ENST00000605738 409 ntBASIC3.24□□□□□ -1.89
AP1S1P61966 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.24□□□□□ -1.89
AP1S1P61966 SNORA35B-201ENST00000607417 129 ntBASIC3.24□□□□□ -1.89
AP1S1P61966 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.24□□□□□ -1.89
AP1S1P61966 AC005156.1-201ENST00000613371 573 ntBASIC3.24□□□□□ -1.89
AP1S1P61966 uc_338.25-201ENST00000613756 156 ntBASIC3.24□□□□□ -1.89
AP1S1P61966 AC138932.5-201ENST00000617759 563 ntBASIC3.24□□□□□ -1.89
AP1S1P61966 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
AP1S1P61966 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.24□□□□□ -1.89
AP1S1P61966 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
AP1S1P61966 AL079305.1-201ENST00000623159 3008 ntBASIC3.24□□□□□ -1.89
AP1S1P61966 AL118496.1-201ENST00000440201 1812 ntBASIC3.23□□□□□ -1.89
AP1S1P61966 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
AP1S1P61966 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
AP1S1P61966 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
AP1S1P61966 AC093908.1-201ENST00000623125 8092 ntBASIC3.23□□□□□ -1.89
AP1S1P61966 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
AP1S1P61966 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
AP1S1P61966 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
AP1S1P61966 AP000567.1-201ENST00000406413 156 ntBASIC3.23□□□□□ -1.89
AP1S1P61966 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
AP1S1P61966 RPL31P45-201ENST00000419532 356 ntBASIC3.23□□□□□ -1.89
AP1S1P61966 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.23□□□□□ -1.89
AP1S1P61966 ELOCP6-201ENST00000429066 328 ntBASIC3.23□□□□□ -1.89
AP1S1P61966 AC006946.1-201ENST00000429106 328 ntBASIC3.23□□□□□ -1.89
AP1S1P61966 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.23□□□□□ -1.89
AP1S1P61966 ELOCP12-201ENST00000458706 328 ntBASIC3.23□□□□□ -1.89
AP1S1P61966 RN7SL863P-201ENST00000462370 296 ntBASIC3.23□□□□□ -1.89
AP1S1P61966 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.23□□□□□ -1.89
AP1S1P61966 RPS27P29-201ENST00000463110 252 ntBASIC3.23□□□□□ -1.89
AP1S1P61966 RPL6P9-201ENST00000466502 859 ntBASIC3.23□□□□□ -1.89
AP1S1P61966 RPS4XP22-201ENST00000480755 780 ntBASIC3.23□□□□□ -1.89
AP1S1P61966 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.23□□□□□ -1.89
AP1S1P61966 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.23□□□□□ -1.89
AP1S1P61966 CAB39P1-201ENST00000502277 460 ntBASIC3.23□□□□□ -1.89
AP1S1P61966 TXNP6-201ENST00000510190 310 ntBASIC3.23□□□□□ -1.89
AP1S1P61966 AC005921.1-201ENST00000510589 286 ntBASIC3.23□□□□□ -1.89
AP1S1P61966 RNA5SP380-201ENST00000517190 98 ntBASIC3.23□□□□□ -1.89
AP1S1P61966 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
AP1S1P61966 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.23□□□□□ -1.89
AP1S1P61966 AC037471.2-201ENST00000564941 598 ntBASIC3.23□□□□□ -1.89
AP1S1P61966 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.23□□□□□ -1.89
AP1S1P61966 AC009303.3-201ENST00000591103 736 ntBASIC3.23□□□□□ -1.89
AP1S1P61966 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.23□□□□□ -1.89
AP1S1P61966 YPEL5P2-201ENST00000605553 359 ntBASIC3.23□□□□□ -1.89
AP1S1P61966 AC091903.1-201ENST00000624322 454 ntBASIC3.23□□□□□ -1.89
AP1S1P61966 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
AP1S1P61966 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
AP1S1P61966 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
AP1S1P61966 AC073346.2-201ENST00000624724 2058 ntBASIC3.23□□□□□ -1.89
AP1S1P61966 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.22□□□□□ -1.89
AP1S1P61966 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
AP1S1P61966 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
AP1S1P61966 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
AP1S1P61966 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.22□□□□□ -1.89
AP1S1P61966 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
AP1S1P61966 OR1S2-201ENST00000302592 978 ntBASIC3.22□□□□□ -1.89
AP1S1P61966 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.22□□□□□ -1.89
AP1S1P61966 RNA5SP295-201ENST00000362655 121 ntBASIC3.22□□□□□ -1.89
AP1S1P61966 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.22□□□□□ -1.89
AP1S1P61966 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
AP1S1P61966 RNA5SP107-201ENST00000411358 122 ntBASIC3.22□□□□□ -1.89
AP1S1P61966 TRGV6-201ENST00000417928 299 ntBASIC3.22□□□□□ -1.89
AP1S1P61966 AC048351.1-201ENST00000420064 602 ntBASIC3.22□□□□□ -1.89
AP1S1P61966 NPM1P24-201ENST00000428039 894 ntBASIC3.22□□□□□ -1.89
AP1S1P61966 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.22□□□□□ -1.89
AP1S1P61966 AC069277.2-201ENST00000454211 432 ntBASIC3.22□□□□□ -1.89
AP1S1P61966 snoU13.22-201ENST00000459428 104 ntBASIC3.22□□□□□ -1.89
AP1S1P61966 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.22□□□□□ -1.89
AP1S1P61966 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
AP1S1P61966 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.22□□□□□ -1.89
AP1S1P61966 OR4A2P-201ENST00000527276 913 ntBASIC3.22□□□□□ -1.89
AP1S1P61966 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
AP1S1P61966 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
AP1S1P61966 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
AP1S1P61966 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.22□□□□□ -1.89
AP1S1P61966 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.22□□□□□ -1.89
AP1S1P61966 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
AP1S1P61966 MTND5P27-201ENST00000428871 1720 ntBASIC3.22□□□□□ -1.89
AP1S1P61966 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.21□□□□□ -1.89
AP1S1P61966 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.21□□□□□ -1.9
AP1S1P61966 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.21□□□□□ -1.9
AP1S1P61966 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
AP1S1P61966 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
AP1S1P61966 SNORA31-201ENST00000362607 130 ntBASIC3.21□□□□□ -1.9
AP1S1P61966 SNORA70.4-201ENST00000365509 134 ntBASIC3.21□□□□□ -1.9
AP1S1P61966 SNORA7.4-201ENST00000384249 137 ntBASIC3.21□□□□□ -1.9
AP1S1P61966 AC007563.3-201ENST00000433233 371 ntBASIC3.21□□□□□ -1.9
AP1S1P61966 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.21□□□□□ -1.9
AP1S1P61966 BX510359.1-201ENST00000456973 237 ntBASIC3.21□□□□□ -1.9
AP1S1P61966 MTCYBP14-201ENST00000457471 715 ntBASIC3.21□□□□□ -1.9
AP1S1P61966 AC091179.1-201ENST00000461606 579 ntBASIC3.21□□□□□ -1.9
AP1S1P61966 RPL7P5-201ENST00000471472 736 ntBASIC3.21□□□□□ -1.9
AP1S1P61966 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC3.21□□□□□ -1.9
AP1S1P61966 AC023050.1-201ENST00000498198 304 ntBASIC3.21□□□□□ -1.9
AP1S1P61966 MTND4LP22-201ENST00000508209 276 ntBASIC3.21□□□□□ -1.9
AP1S1P61966 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms