Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC2.42□□□□□ -2.02
CKS1BP61024 Z77249.1-201ENST00000444622 1175 ntBASIC2.42□□□□□ -2.02
CKS1BP61024 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.42□□□□□ -2.02
CKS1BP61024 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC2.42□□□□□ -2.02
CKS1BP61024 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.42□□□□□ -2.02
CKS1BP61024 snoU13.24-201ENST00000458998 104 ntBASIC2.42□□□□□ -2.02
CKS1BP61024 OR9M1P-201ENST00000459641 921 ntBASIC2.42□□□□□ -2.02
CKS1BP61024 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC2.42□□□□□ -2.02
CKS1BP61024 AC023598.1-201ENST00000472521 361 ntBASIC2.42□□□□□ -2.02
CKS1BP61024 GAPDHP39-201ENST00000481866 979 ntBASIC2.42□□□□□ -2.02
CKS1BP61024 RN7SL323P-201ENST00000494712 295 ntBASIC2.42□□□□□ -2.02
CKS1BP61024 HMGB1P3-201ENST00000502802 616 ntBASIC2.42□□□□□ -2.02
CKS1BP61024 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC2.42□□□□□ -2.02
CKS1BP61024 AIG1P1-201ENST00000503376 148 ntBASIC2.42□□□□□ -2.02
CKS1BP61024 AP001960.1-201ENST00000506494 658 ntBASIC2.42□□□□□ -2.02
CKS1BP61024 AC009901.1-201ENST00000506703 541 ntBASIC2.42□□□□□ -2.02
CKS1BP61024 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC2.42□□□□□ -2.02
CKS1BP61024 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC2.42□□□□□ -2.02
CKS1BP61024 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.42□□□□□ -2.02
CKS1BP61024 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC2.42□□□□□ -2.02
CKS1BP61024 SNORA70.19-201ENST00000516717 90 ntBASIC2.42□□□□□ -2.02
CKS1BP61024 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC2.42□□□□□ -2.02
CKS1BP61024 CR383656.6-201ENST00000550518 394 ntBASIC2.42□□□□□ -2.02
CKS1BP61024 IGKV2OR2-8-201ENST00000558710 300 ntBASIC2.42□□□□□ -2.02
CKS1BP61024 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC2.42□□□□□ -2.02
CKS1BP61024 AC138761.3-201ENST00000579993 334 ntBASIC2.42□□□□□ -2.02
CKS1BP61024 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC2.42□□□□□ -2.02
CKS1BP61024 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC2.42□□□□□ -2.02
CKS1BP61024 AC104785.1-201ENST00000603220 588 ntBASIC2.42□□□□□ -2.02
CKS1BP61024 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.42□□□□□ -2.02
CKS1BP61024 AP003355.3-201ENST00000623465 114 ntBASIC2.42□□□□□ -2.02
CKS1BP61024 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC2.42□□□□□ -2.02
CKS1BP61024 CCT7-217ENST00000626868 249 ntTSL 5 BASIC2.42□□□□□ -2.02
CKS1BP61024 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC2.42□□□□□ -2.02
CKS1BP61024 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC2.42□□□□□ -2.02
CKS1BP61024 CD36-221ENST00000534394 1741 ntTSL 2 BASIC2.42□□□□□ -2.02
CKS1BP61024 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
CKS1BP61024 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
CKS1BP61024 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.41□□□□□ -2.02
CKS1BP61024 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
CKS1BP61024 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.41□□□□□ -2.02
CKS1BP61024 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC2.41□□□□□ -2.02
CKS1BP61024 ZNF37BP-203ENST00000452306 1352 ntBASIC2.41□□□□□ -2.02
CKS1BP61024 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
CKS1BP61024 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CKS1BP61024 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
CKS1BP61024 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
CKS1BP61024 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
CKS1BP61024 SNORA70C-201ENST00000384538 135 ntBASIC2.41□□□□□ -2.02
CKS1BP61024 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC2.41□□□□□ -2.02
CKS1BP61024 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.41□□□□□ -2.02
CKS1BP61024 BRWD1P3-201ENST00000428816 390 ntBASIC2.41□□□□□ -2.02
CKS1BP61024 RPS26P56-201ENST00000444468 240 ntBASIC2.41□□□□□ -2.02
CKS1BP61024 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC2.41□□□□□ -2.02
CKS1BP61024 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC2.41□□□□□ -2.02
CKS1BP61024 HMGB1P15-201ENST00000453854 435 ntBASIC2.41□□□□□ -2.02
CKS1BP61024 AC022034.3-201ENST00000471393 478 ntBASIC2.41□□□□□ -2.02
CKS1BP61024 AC010301.1-201ENST00000473936 355 ntBASIC2.41□□□□□ -2.02
CKS1BP61024 RPS27AP9-201ENST00000477681 438 ntBASIC2.41□□□□□ -2.02
CKS1BP61024 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC2.41□□□□□ -2.02
CKS1BP61024 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC2.41□□□□□ -2.02
CKS1BP61024 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC2.41□□□□□ -2.02
CKS1BP61024 RPL7L1P13-201ENST00000511702 739 ntBASIC2.41□□□□□ -2.02
CKS1BP61024 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CKS1BP61024 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC2.41□□□□□ -2.02
CKS1BP61024 CIR1P1-201ENST00000524055 1133 ntBASIC2.41□□□□□ -2.02
CKS1BP61024 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.41□□□□□ -2.02
CKS1BP61024 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.41□□□□□ -2.02
CKS1BP61024 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC2.41□□□□□ -2.02
CKS1BP61024 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC2.41□□□□□ -2.02
CKS1BP61024 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.41□□□□□ -2.02
CKS1BP61024 AC009220.3-201ENST00000604318 586 ntBASIC2.41□□□□□ -2.02
CKS1BP61024 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC2.41□□□□□ -2.02
CKS1BP61024 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC2.41□□□□□ -2.02
CKS1BP61024 AC002064.3-201ENST00000623448 346 ntBASIC2.41□□□□□ -2.02
CKS1BP61024 AC110801.1-201ENST00000623590 212 ntBASIC2.41□□□□□ -2.02
CKS1BP61024 AC020923.1-201ENST00000624021 917 ntBASIC2.41□□□□□ -2.02
CKS1BP61024 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CKS1BP61024 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.41□□□□□ -2.02
CKS1BP61024 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CKS1BP61024 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.41□□□□□ -2.02
CKS1BP61024 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
CKS1BP61024 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.4□□□□□ -2.02
CKS1BP61024 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
CKS1BP61024 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.02
CKS1BP61024 OSBPL9P4-201ENST00000371707 1800 ntBASIC2.4□□□□□ -2.02
CKS1BP61024 AC006378.2-201ENST00000623178 2476 ntBASIC2.4□□□□□ -2.03
CKS1BP61024 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
CKS1BP61024 RNU6-629P-201ENST00000384061 103 ntBASIC2.4□□□□□ -2.03
CKS1BP61024 RNU6-244P-201ENST00000391028 104 ntBASIC2.4□□□□□ -2.03
CKS1BP61024 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CKS1BP61024 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC2.4□□□□□ -2.03
CKS1BP61024 AL356095.1-201ENST00000417217 199 ntBASIC2.4□□□□□ -2.03
CKS1BP61024 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC2.4□□□□□ -2.03
CKS1BP61024 HMGN2P30-201ENST00000423237 256 ntBASIC2.4□□□□□ -2.03
CKS1BP61024 RPL18P10-201ENST00000425606 538 ntBASIC2.4□□□□□ -2.03
CKS1BP61024 NIPA2P1-201ENST00000426223 976 ntBASIC2.4□□□□□ -2.03
CKS1BP61024 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.4□□□□□ -2.03
CKS1BP61024 PTP4A1P3-201ENST00000433661 420 ntBASIC2.4□□□□□ -2.03
CKS1BP61024 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms