Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AP000926.4-201ENST00000527351 454 ntBASIC3.33□□□□□ -1.88
VSX2P58304 HIGD1AP10-201ENST00000527837 282 ntBASIC3.33□□□□□ -1.88
VSX2P58304 MIR3186-201ENST00000577404 85 ntBASIC3.33□□□□□ -1.88
VSX2P58304 AC011374.2-201ENST00000607135 526 ntBASIC3.33□□□□□ -1.88
VSX2P58304 XIST_intron.1-201ENST00000619444 68 ntBASIC3.33□□□□□ -1.88
VSX2P58304 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.33□□□□□ -1.88
VSX2P58304 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.33□□□□□ -1.88
VSX2P58304 U6.107-201ENST00000637108 79 ntBASIC3.33□□□□□ -1.88
VSX2P58304 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
VSX2P58304 MTND4P31-201ENST00000425607 1343 ntBASIC3.33□□□□□ -1.88
VSX2P58304 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
VSX2P58304 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
VSX2P58304 NMD3P1-201ENST00000439704 1488 ntBASIC3.33□□□□□ -1.88
VSX2P58304 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
VSX2P58304 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
VSX2P58304 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
VSX2P58304 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
VSX2P58304 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.32□□□□□ -1.88
VSX2P58304 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
VSX2P58304 USP8P1-201ENST00000494673 3183 ntBASIC3.32□□□□□ -1.88
VSX2P58304 AC093908.1-201ENST00000623125 8092 ntBASIC3.32□□□□□ -1.88
VSX2P58304 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
VSX2P58304 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
VSX2P58304 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
VSX2P58304 MIR183-201ENST00000384958 110 ntBASIC3.32□□□□□ -1.88
VSX2P58304 TAF9BP2-201ENST00000400856 499 ntBASIC3.32□□□□□ -1.88
VSX2P58304 HMGB1P13-201ENST00000406019 642 ntBASIC3.32□□□□□ -1.88
VSX2P58304 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.32□□□□□ -1.88
VSX2P58304 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.32□□□□□ -1.88
VSX2P58304 AC017079.2-201ENST00000416102 485 ntBASIC3.32□□□□□ -1.88
VSX2P58304 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.32□□□□□ -1.88
VSX2P58304 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.32□□□□□ -1.88
VSX2P58304 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.32□□□□□ -1.88
VSX2P58304 PRDX3P3-201ENST00000447765 522 ntBASIC3.32□□□□□ -1.88
VSX2P58304 RBMY2UP-201ENST00000453474 324 ntBASIC3.32□□□□□ -1.88
VSX2P58304 RPL37P3-201ENST00000456825 293 ntBASIC3.32□□□□□ -1.88
VSX2P58304 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.32□□□□□ -1.88
VSX2P58304 RPL21P10-201ENST00000463521 490 ntBASIC3.32□□□□□ -1.88
VSX2P58304 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.32□□□□□ -1.88
VSX2P58304 RPS3AP50-201ENST00000487064 803 ntBASIC3.32□□□□□ -1.88
VSX2P58304 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.32□□□□□ -1.88
VSX2P58304 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.32□□□□□ -1.88
VSX2P58304 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.32□□□□□ -1.88
VSX2P58304 AC022790.1-201ENST00000522872 204 ntBASIC3.32□□□□□ -1.88
VSX2P58304 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.32□□□□□ -1.88
VSX2P58304 DUXAP6-201ENST00000553858 601 ntBASIC3.32□□□□□ -1.88
VSX2P58304 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.32□□□□□ -1.88
VSX2P58304 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.32□□□□□ -1.88
VSX2P58304 ZNF192P1-203ENST00000565888 810 ntBASIC3.32□□□□□ -1.88
VSX2P58304 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.32□□□□□ -1.88
VSX2P58304 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.32□□□□□ -1.88
VSX2P58304 MIR5186-201ENST00000577504 120 ntBASIC3.32□□□□□ -1.88
VSX2P58304 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.32□□□□□ -1.88
VSX2P58304 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.32□□□□□ -1.88
VSX2P58304 AC006254.3-201ENST00000603353 884 ntBASIC3.32□□□□□ -1.88
VSX2P58304 SRGNP1-201ENST00000603392 451 ntBASIC3.32□□□□□ -1.88
VSX2P58304 AC015849.2-201ENST00000605738 409 ntBASIC3.32□□□□□ -1.88
VSX2P58304 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
VSX2P58304 AC024023.1-201ENST00000624530 922 ntBASIC3.32□□□□□ -1.88
VSX2P58304 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
VSX2P58304 U6.105-201ENST00000637379 88 ntBASIC3.32□□□□□ -1.88
VSX2P58304 AL645937.1-201ENST00000641739 1652 ntBASIC3.32□□□□□ -1.88
VSX2P58304 AL118496.1-201ENST00000440201 1812 ntBASIC3.32□□□□□ -1.88
VSX2P58304 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
VSX2P58304 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
VSX2P58304 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
VSX2P58304 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.32□□□□□ -1.88
VSX2P58304 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
VSX2P58304 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VSX2P58304 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.31□□□□□ -1.88
VSX2P58304 AC119744.1-201ENST00000454746 1715 ntBASIC3.31□□□□□ -1.88
VSX2P58304 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
VSX2P58304 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
VSX2P58304 RNU6-761P-201ENST00000384148 107 ntBASIC3.31□□□□□ -1.88
VSX2P58304 MIR34B-201ENST00000385076 84 ntBASIC3.31□□□□□ -1.88
VSX2P58304 SNORD17-201ENST00000390930 237 ntBASIC3.31□□□□□ -1.88
VSX2P58304 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.31□□□□□ -1.88
VSX2P58304 AL159987.2-201ENST00000432754 307 ntBASIC3.31□□□□□ -1.88
VSX2P58304 HMGB3P8-201ENST00000449709 577 ntBASIC3.31□□□□□ -1.88
VSX2P58304 PPIAP3-201ENST00000450588 505 ntBASIC3.31□□□□□ -1.88
VSX2P58304 MRPS31P2-201ENST00000451581 518 ntBASIC3.31□□□□□ -1.88
VSX2P58304 OR52A4P-202ENST00000481634 799 ntBASIC3.31□□□□□ -1.88
VSX2P58304 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.31□□□□□ -1.88
VSX2P58304 ARL2BPP6-201ENST00000512757 439 ntBASIC3.31□□□□□ -1.88
VSX2P58304 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.31□□□□□ -1.88
VSX2P58304 AC008494.2-201ENST00000514544 370 ntBASIC3.31□□□□□ -1.88
VSX2P58304 AC103833.1-201ENST00000517442 172 ntBASIC3.31□□□□□ -1.88
VSX2P58304 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.31□□□□□ -1.88
VSX2P58304 NDUFB9P3-201ENST00000521269 501 ntBASIC3.31□□□□□ -1.88
VSX2P58304 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VSX2P58304 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.31□□□□□ -1.88
VSX2P58304 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.31□□□□□ -1.88
VSX2P58304 MIR4738-201ENST00000579134 87 ntBASIC3.31□□□□□ -1.88
VSX2P58304 MIR4425-201ENST00000580572 84 ntBASIC3.31□□□□□ -1.88
VSX2P58304 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.31□□□□□ -1.88
VSX2P58304 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.31□□□□□ -1.88
VSX2P58304 AC040174.2-201ENST00000602701 465 ntBASIC3.31□□□□□ -1.88
VSX2P58304 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.31□□□□□ -1.88
VSX2P58304 MIR1264-201ENST00000616374 69 ntBASIC3.31□□□□□ -1.88
VSX2P58304 AL355365.1-201ENST00000616480 294 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms