Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 SMG1P6-201ENST00000532337 2930 ntBASIC5.03□□□□□ -1.6
GFRA1P56159 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.03□□□□□ -1.6
GFRA1P56159 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
GFRA1P56159 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
GFRA1P56159 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
GFRA1P56159 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.02□□□□□ -1.61
GFRA1P56159 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
GFRA1P56159 AP005435.3-201ENST00000531260 3198 ntBASIC5.02□□□□□ -1.61
GFRA1P56159 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
GFRA1P56159 AL138713.1-201ENST00000624026 2130 ntBASIC5.02□□□□□ -1.61
GFRA1P56159 MTND5P17-201ENST00000418405 1603 ntBASIC5.02□□□□□ -1.61
GFRA1P56159 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.02□□□□□ -1.61
GFRA1P56159 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.02□□□□□ -1.61
GFRA1P56159 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.02□□□□□ -1.61
GFRA1P56159 RNU6-845P-201ENST00000362578 103 ntBASIC5.02□□□□□ -1.61
GFRA1P56159 RNA5SP319-201ENST00000362768 119 ntBASIC5.02□□□□□ -1.61
GFRA1P56159 RNU4-73P-201ENST00000363164 141 ntBASIC5.02□□□□□ -1.61
GFRA1P56159 RNA5SP326-201ENST00000363209 110 ntBASIC5.02□□□□□ -1.61
GFRA1P56159 RN7SKP6-201ENST00000364795 319 ntBASIC5.02□□□□□ -1.61
GFRA1P56159 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
GFRA1P56159 RNU6-74P-201ENST00000384235 107 ntBASIC5.02□□□□□ -1.61
GFRA1P56159 Y_RNA.509-201ENST00000384506 99 ntBASIC5.02□□□□□ -1.61
GFRA1P56159 MIR551A-201ENST00000385042 96 ntBASIC5.02□□□□□ -1.61
GFRA1P56159 RN7SKP247-201ENST00000411094 308 ntBASIC5.02□□□□□ -1.61
GFRA1P56159 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.02□□□□□ -1.61
GFRA1P56159 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.02□□□□□ -1.61
GFRA1P56159 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.02□□□□□ -1.61
GFRA1P56159 RPS20P5-201ENST00000434808 360 ntBASIC5.02□□□□□ -1.61
GFRA1P56159 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.02□□□□□ -1.61
GFRA1P56159 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.02□□□□□ -1.61
GFRA1P56159 SPRYD7P1-201ENST00000443861 570 ntBASIC5.02□□□□□ -1.61
GFRA1P56159 CBWD4P-201ENST00000445695 655 ntBASIC5.02□□□□□ -1.61
GFRA1P56159 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC5.02□□□□□ -1.61
GFRA1P56159 AC100832.1-201ENST00000471945 383 ntBASIC5.02□□□□□ -1.61
GFRA1P56159 RN7SL583P-201ENST00000475692 287 ntBASIC5.02□□□□□ -1.61
GFRA1P56159 AC233702.1-201ENST00000482905 502 ntBASIC5.02□□□□□ -1.61
GFRA1P56159 RN7SL284P-201ENST00000498823 275 ntBASIC5.02□□□□□ -1.61
GFRA1P56159 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.02□□□□□ -1.61
GFRA1P56159 AC005798.1-201ENST00000513715 387 ntBASIC5.02□□□□□ -1.61
GFRA1P56159 Y_RNA.675-201ENST00000516389 149 ntBASIC5.02□□□□□ -1.61
GFRA1P56159 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.02□□□□□ -1.61
GFRA1P56159 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC5.02□□□□□ -1.61
GFRA1P56159 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC5.02□□□□□ -1.61
GFRA1P56159 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC5.02□□□□□ -1.61
GFRA1P56159 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.02□□□□□ -1.61
GFRA1P56159 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.02□□□□□ -1.61
GFRA1P56159 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.02□□□□□ -1.61
GFRA1P56159 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.02□□□□□ -1.61
GFRA1P56159 AC105429.2-201ENST00000610567 517 ntBASIC5.02□□□□□ -1.61
GFRA1P56159 AL118522.2-201ENST00000616045 615 ntBASIC5.02□□□□□ -1.61
GFRA1P56159 AC002550.2-201ENST00000621246 394 ntBASIC5.02□□□□□ -1.61
GFRA1P56159 AC244100.1-202ENST00000621554 382 ntBASIC5.02□□□□□ -1.61
GFRA1P56159 MIR8080-201ENST00000622224 89 ntBASIC5.02□□□□□ -1.61
GFRA1P56159 AC091925.2-201ENST00000625059 256 ntBASIC5.02□□□□□ -1.61
GFRA1P56159 MIR4496-201ENST00000635896 61 ntBASIC5.02□□□□□ -1.61
GFRA1P56159 AC112487.2-201ENST00000637950 304 ntBASIC5.02□□□□□ -1.61
GFRA1P56159 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.02□□□□□ -1.61
GFRA1P56159 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
GFRA1P56159 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
GFRA1P56159 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
GFRA1P56159 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
GFRA1P56159 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
GFRA1P56159 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
GFRA1P56159 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
GFRA1P56159 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
GFRA1P56159 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
GFRA1P56159 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
GFRA1P56159 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
GFRA1P56159 AC232271.1-201ENST00000602455 2715 ntBASIC5.02□□□□□ -1.61
GFRA1P56159 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
GFRA1P56159 AC006020.1-201ENST00000420179 1854 ntBASIC5.01□□□□□ -1.61
GFRA1P56159 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.01□□□□□ -1.61
GFRA1P56159 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
GFRA1P56159 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
GFRA1P56159 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
GFRA1P56159 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.01□□□□□ -1.61
GFRA1P56159 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
GFRA1P56159 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
GFRA1P56159 AL121886.1-201ENST00000358609 435 ntBASIC5.01□□□□□ -1.61
GFRA1P56159 U3.11-201ENST00000364476 212 ntBASIC5.01□□□□□ -1.61
GFRA1P56159 Y_RNA.255-201ENST00000364581 97 ntBASIC5.01□□□□□ -1.61
GFRA1P56159 RNU6-996P-201ENST00000365438 107 ntBASIC5.01□□□□□ -1.61
GFRA1P56159 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.01□□□□□ -1.61
GFRA1P56159 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
GFRA1P56159 SNORD51-201ENST00000384320 80 ntBASIC5.01□□□□□ -1.61
GFRA1P56159 Y_RNA.529-201ENST00000384586 119 ntBASIC5.01□□□□□ -1.61
GFRA1P56159 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
GFRA1P56159 Z93019.1-201ENST00000416450 973 ntBASIC5.01□□□□□ -1.61
GFRA1P56159 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC5.01□□□□□ -1.61
GFRA1P56159 AC007161.1-204ENST00000423039 460 ntBASIC5.01□□□□□ -1.61
GFRA1P56159 RPS12P5-201ENST00000423449 371 ntBASIC5.01□□□□□ -1.61
GFRA1P56159 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.01□□□□□ -1.61
GFRA1P56159 RIMKLBP2-201ENST00000424737 654 ntBASIC5.01□□□□□ -1.61
GFRA1P56159 BRWD1P3-201ENST00000428816 390 ntBASIC5.01□□□□□ -1.61
GFRA1P56159 PSMA2P3-201ENST00000429685 675 ntBASIC5.01□□□□□ -1.61
GFRA1P56159 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC5.01□□□□□ -1.61
GFRA1P56159 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.01□□□□□ -1.61
GFRA1P56159 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
GFRA1P56159 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.01□□□□□ -1.61
GFRA1P56159 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms