Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 HMGB1P50-201ENST00000605814 607 ntBASIC3.95□□□□□ -1.78
ATXN3P54252 AC026741.1-201ENST00000605892 482 ntBASIC3.95□□□□□ -1.78
ATXN3P54252 HMGN2P28-201ENST00000606102 262 ntBASIC3.95□□□□□ -1.78
ATXN3P54252 AP004247.3-201ENST00000608682 624 ntBASIC3.95□□□□□ -1.78
ATXN3P54252 AC015967.1-201ENST00000619893 476 ntBASIC3.95□□□□□ -1.78
ATXN3P54252 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.95□□□□□ -1.78
ATXN3P54252 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.95□□□□□ -1.78
ATXN3P54252 AL031985.3-201ENST00000565390 2449 ntBASIC3.95□□□□□ -1.78
ATXN3P54252 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.95□□□□□ -1.78
ATXN3P54252 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.95□□□□□ -1.78
ATXN3P54252 AP002001.2-201ENST00000529025 1469 ntBASIC3.94□□□□□ -1.78
ATXN3P54252 MTND5P1-201ENST00000445440 1375 ntBASIC3.94□□□□□ -1.78
ATXN3P54252 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ATXN3P54252 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ATXN3P54252 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.94□□□□□ -1.78
ATXN3P54252 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ATXN3P54252 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.94□□□□□ -1.78
ATXN3P54252 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.94□□□□□ -1.78
ATXN3P54252 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.94□□□□□ -1.78
ATXN3P54252 AC244098.2-201ENST00000422068 99 ntBASIC3.94□□□□□ -1.78
ATXN3P54252 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.94□□□□□ -1.78
ATXN3P54252 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.94□□□□□ -1.78
ATXN3P54252 AC096632.1-201ENST00000427395 310 ntBASIC3.94□□□□□ -1.78
ATXN3P54252 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.94□□□□□ -1.78
ATXN3P54252 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.94□□□□□ -1.78
ATXN3P54252 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.94□□□□□ -1.78
ATXN3P54252 AL356535.1-201ENST00000440335 398 ntBASIC3.94□□□□□ -1.78
ATXN3P54252 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
ATXN3P54252 NPM1P49-201ENST00000448027 714 ntBASIC3.94□□□□□ -1.78
ATXN3P54252 CYCSP53-201ENST00000455540 265 ntBASIC3.94□□□□□ -1.78
ATXN3P54252 RPL9P32-201ENST00000464118 620 ntBASIC3.94□□□□□ -1.78
ATXN3P54252 NCOR1P1-202ENST00000486162 291 ntBASIC3.94□□□□□ -1.78
ATXN3P54252 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.94□□□□□ -1.78
ATXN3P54252 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
ATXN3P54252 AC005798.1-201ENST00000513715 387 ntBASIC3.94□□□□□ -1.78
ATXN3P54252 RNU6-416P-201ENST00000516265 103 ntBASIC3.94□□□□□ -1.78
ATXN3P54252 MIR2114-201ENST00000516645 80 ntBASIC3.94□□□□□ -1.78
ATXN3P54252 RNA5SP179-201ENST00000517284 121 ntBASIC3.94□□□□□ -1.78
ATXN3P54252 NARSP2-201ENST00000518524 679 ntBASIC3.94□□□□□ -1.78
ATXN3P54252 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.94□□□□□ -1.78
ATXN3P54252 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.94□□□□□ -1.78
ATXN3P54252 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.94□□□□□ -1.78
ATXN3P54252 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.94□□□□□ -1.78
ATXN3P54252 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.94□□□□□ -1.78
ATXN3P54252 CCNG2P1-201ENST00000549521 1000 ntBASIC3.94□□□□□ -1.78
ATXN3P54252 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.94□□□□□ -1.78
ATXN3P54252 AGGF1P8-201ENST00000562979 1000 ntBASIC3.94□□□□□ -1.78
ATXN3P54252 RPL23AP87-202ENST00000573039 466 ntBASIC3.94□□□□□ -1.78
ATXN3P54252 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.94□□□□□ -1.78
ATXN3P54252 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
ATXN3P54252 AP002906.1-201ENST00000603405 233 ntBASIC3.94□□□□□ -1.78
ATXN3P54252 AL512506.1-201ENST00000613918 449 ntBASIC3.94□□□□□ -1.78
ATXN3P54252 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.94□□□□□ -1.78
ATXN3P54252 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ATXN3P54252 MIR1183-201ENST00000408856 89 ntBASIC3.93□□□□□ -1.78
ATXN3P54252 RN7SKP56-201ENST00000410513 331 ntBASIC3.93□□□□□ -1.78
ATXN3P54252 RNU2-72P-201ENST00000411175 163 ntBASIC3.93□□□□□ -1.78
ATXN3P54252 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.93□□□□□ -1.78
ATXN3P54252 Z97055.1-201ENST00000419730 712 ntBASIC3.93□□□□□ -1.78
ATXN3P54252 AC246680.2-201ENST00000422106 389 ntBASIC3.93□□□□□ -1.78
ATXN3P54252 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ATXN3P54252 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.93□□□□□ -1.78
ATXN3P54252 RPL21P112-201ENST00000434403 463 ntBASIC3.93□□□□□ -1.78
ATXN3P54252 TBCAP1-201ENST00000436520 327 ntBASIC3.93□□□□□ -1.78
ATXN3P54252 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.93□□□□□ -1.78
ATXN3P54252 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.93□□□□□ -1.78
ATXN3P54252 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.93□□□□□ -1.78
ATXN3P54252 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.93□□□□□ -1.78
ATXN3P54252 RPL21P11-201ENST00000461458 483 ntBASIC3.93□□□□□ -1.78
ATXN3P54252 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.93□□□□□ -1.78
ATXN3P54252 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.93□□□□□ -1.78
ATXN3P54252 BNIP3P41-201ENST00000503774 571 ntBASIC3.93□□□□□ -1.78
ATXN3P54252 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ATXN3P54252 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.93□□□□□ -1.78
ATXN3P54252 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.93□□□□□ -1.78
ATXN3P54252 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
ATXN3P54252 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.93□□□□□ -1.78
ATXN3P54252 GNRHR2P1-201ENST00000555315 631 ntBASIC3.93□□□□□ -1.78
ATXN3P54252 AC037471.2-201ENST00000564941 598 ntBASIC3.93□□□□□ -1.78
ATXN3P54252 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.93□□□□□ -1.78
ATXN3P54252 AC098483.2-201ENST00000603158 454 ntBASIC3.93□□□□□ -1.78
ATXN3P54252 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.93□□□□□ -1.78
ATXN3P54252 AC092354.2-201ENST00000607786 514 ntBASIC3.93□□□□□ -1.78
ATXN3P54252 MIR486-1-201ENST00000612171 68 ntBASIC3.93□□□□□ -1.78
ATXN3P54252 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.93□□□□□ -1.78
ATXN3P54252 AC105227.2-201ENST00000615075 605 ntBASIC3.93□□□□□ -1.78
ATXN3P54252 AC020923.1-201ENST00000624021 917 ntBASIC3.93□□□□□ -1.78
ATXN3P54252 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ATXN3P54252 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.93□□□□□ -1.78
ATXN3P54252 AL355578.1-201ENST00000607405 1328 ntBASIC3.93□□□□□ -1.78
ATXN3P54252 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
ATXN3P54252 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
ATXN3P54252 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.92□□□□□ -1.78
ATXN3P54252 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
ATXN3P54252 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.92□□□□□ -1.78
ATXN3P54252 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ATXN3P54252 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.92□□□□□ -1.78
ATXN3P54252 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.92□□□□□ -1.78
ATXN3P54252 AL121972.1-201ENST00000402023 252 ntBASIC3.92□□□□□ -1.78
ATXN3P54252 SFR1P1-201ENST00000403720 688 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms