Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
POLR2JP52435 CYCSP43-201ENST00000438233 310 ntBASIC2.75□□□□□ -1.97
POLR2JP52435 GSTA11P-201ENST00000452866 669 ntBASIC2.75□□□□□ -1.97
POLR2JP52435 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.75□□□□□ -1.97
POLR2JP52435 AC092451.1-201ENST00000480211 153 ntBASIC2.75□□□□□ -1.97
POLR2JP52435 OR2A20P-203ENST00000498397 1268 ntBASIC2.75□□□□□ -1.97
POLR2JP52435 AC010285.3-201ENST00000511668 676 ntBASIC2.75□□□□□ -1.97
POLR2JP52435 SAP18P1-201ENST00000512058 390 ntBASIC2.75□□□□□ -1.97
POLR2JP52435 AP000619.3-201ENST00000535634 1127 ntBASIC2.75□□□□□ -1.97
POLR2JP52435 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC2.75□□□□□ -1.97
POLR2JP52435 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.75□□□□□ -1.97
POLR2JP52435 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC2.75□□□□□ -1.97
POLR2JP52435 OR4H12P-201ENST00000556269 907 ntBASIC2.75□□□□□ -1.97
POLR2JP52435 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.75□□□□□ -1.97
POLR2JP52435 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC2.75□□□□□ -1.97
POLR2JP52435 MIR7112-201ENST00000616126 65 ntBASIC2.75□□□□□ -1.97
POLR2JP52435 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.75□□□□□ -1.97
POLR2JP52435 AC026422.1-201ENST00000623961 452 ntBASIC2.75□□□□□ -1.97
POLR2JP52435 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC2.75□□□□□ -1.97
POLR2JP52435 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.75□□□□□ -1.97
POLR2JP52435 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
POLR2JP52435 AC009313.2-201ENST00000417893 1941 ntBASIC2.75□□□□□ -1.97
POLR2JP52435 POMP-202ENST00000460403 1428 ntTSL 3 BASIC2.75□□□□□ -1.97
POLR2JP52435 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
POLR2JP52435 AC092079.1-201ENST00000558620 1985 ntBASIC2.74□□□□□ -1.97
POLR2JP52435 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC2.74□□□□□ -1.97
POLR2JP52435 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
POLR2JP52435 SNORA71.1-201ENST00000364523 117 ntBASIC2.74□□□□□ -1.97
POLR2JP52435 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
POLR2JP52435 OR13C3-201ENST00000374781 1108 ntBASIC2.74□□□□□ -1.97
POLR2JP52435 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
POLR2JP52435 AC069157.1-201ENST00000421749 137 ntBASIC2.74□□□□□ -1.97
POLR2JP52435 DUTP6-201ENST00000425573 462 ntBASIC2.74□□□□□ -1.97
POLR2JP52435 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC2.74□□□□□ -1.97
POLR2JP52435 NEK4P1-201ENST00000433383 879 ntBASIC2.74□□□□□ -1.97
POLR2JP52435 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC2.74□□□□□ -1.97
POLR2JP52435 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC2.74□□□□□ -1.97
POLR2JP52435 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.74□□□□□ -1.97
POLR2JP52435 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.74□□□□□ -1.97
POLR2JP52435 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC2.74□□□□□ -1.97
POLR2JP52435 RPL27AP5-201ENST00000469428 449 ntBASIC2.74□□□□□ -1.97
POLR2JP52435 GMPSP1-201ENST00000514075 579 ntBASIC2.74□□□□□ -1.97
POLR2JP52435 AC008885.1-201ENST00000514930 301 ntBASIC2.74□□□□□ -1.97
POLR2JP52435 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.74□□□□□ -1.97
POLR2JP52435 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC2.74□□□□□ -1.97
POLR2JP52435 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.74□□□□□ -1.97
POLR2JP52435 AC107016.2-201ENST00000547968 190 ntBASIC2.74□□□□□ -1.97
POLR2JP52435 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.74□□□□□ -1.97
POLR2JP52435 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC2.74□□□□□ -1.97
POLR2JP52435 CSNK1A1P1-202ENST00000563423 981 ntBASIC2.74□□□□□ -1.97
POLR2JP52435 MAGOH2P-202ENST00000584384 429 ntBASIC2.74□□□□□ -1.97
POLR2JP52435 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.74□□□□□ -1.97
POLR2JP52435 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC2.74□□□□□ -1.97
POLR2JP52435 ELOCP35-201ENST00000604289 336 ntBASIC2.74□□□□□ -1.97
POLR2JP52435 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.74□□□□□ -1.97
POLR2JP52435 MIR7975-201ENST00000619350 68 ntBASIC2.74□□□□□ -1.97
POLR2JP52435 AC022509.4-201ENST00000621404 572 ntBASIC2.74□□□□□ -1.97
POLR2JP52435 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
POLR2JP52435 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
POLR2JP52435 AL079305.1-201ENST00000623159 3008 ntBASIC2.74□□□□□ -1.97
POLR2JP52435 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
POLR2JP52435 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
POLR2JP52435 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC2.74□□□□□ -1.97
POLR2JP52435 MIR134-201ENST00000385258 73 ntBASIC2.73□□□□□ -1.97
POLR2JP52435 SNORA11B-201ENST00000408175 129 ntBASIC2.73□□□□□ -1.97
POLR2JP52435 TRIAP1P1-201ENST00000427062 225 ntBASIC2.73□□□□□ -1.97
POLR2JP52435 KCTD10P1-201ENST00000434203 625 ntBASIC2.73□□□□□ -1.97
POLR2JP52435 RAB9AP5-201ENST00000437794 597 ntBASIC2.73□□□□□ -1.97
POLR2JP52435 RAB9AP2-201ENST00000443911 597 ntBASIC2.73□□□□□ -1.97
POLR2JP52435 RPL37P4-201ENST00000448908 268 ntBASIC2.73□□□□□ -1.97
POLR2JP52435 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.73□□□□□ -1.97
POLR2JP52435 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC2.73□□□□□ -1.97
POLR2JP52435 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.73□□□□□ -1.97
POLR2JP52435 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.73□□□□□ -1.97
POLR2JP52435 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC2.73□□□□□ -1.97
POLR2JP52435 SNORA9.3-201ENST00000516383 129 ntBASIC2.73□□□□□ -1.97
POLR2JP52435 DUXAP2-201ENST00000519198 589 ntBASIC2.73□□□□□ -1.97
POLR2JP52435 HPRT1P3-201ENST00000539521 576 ntBASIC2.73□□□□□ -1.97
POLR2JP52435 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC2.73□□□□□ -1.97
POLR2JP52435 AC034105.4-201ENST00000568304 277 ntBASIC2.73□□□□□ -1.97
POLR2JP52435 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC2.73□□□□□ -1.97
POLR2JP52435 MIR4458-201ENST00000578872 75 ntBASIC2.73□□□□□ -1.97
POLR2JP52435 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.73□□□□□ -1.97
POLR2JP52435 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.73□□□□□ -1.97
POLR2JP52435 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC2.73□□□□□ -1.97
POLR2JP52435 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
POLR2JP52435 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.73□□□□□ -1.97
POLR2JP52435 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.72□□□□□ -1.97
POLR2JP52435 MTND5P7-201ENST00000413558 1798 ntBASIC2.72□□□□□ -1.97
POLR2JP52435 MAPK10-362ENST00000641864 4484 ntBASIC2.72□□□□□ -1.97
POLR2JP52435 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
POLR2JP52435 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
POLR2JP52435 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.72□□□□□ -1.97
POLR2JP52435 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
POLR2JP52435 GSTA8P-201ENST00000404253 637 ntBASIC2.72□□□□□ -1.97
POLR2JP52435 RNA5SP120-201ENST00000410900 112 ntBASIC2.72□□□□□ -1.97
POLR2JP52435 MTND4LP21-201ENST00000415303 295 ntBASIC2.72□□□□□ -1.97
POLR2JP52435 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.72□□□□□ -1.97
POLR2JP52435 AL672296.1-201ENST00000427780 2158 ntBASIC2.72□□□□□ -1.97
POLR2JP52435 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms