Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC023050.3-201ENST00000541142 333 ntBASIC5.97□□□□□ -1.45
USP11P51784 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.97□□□□□ -1.45
USP11P51784 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC5.97□□□□□ -1.45
USP11P51784 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC5.97□□□□□ -1.45
USP11P51784 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.97□□□□□ -1.45
USP11P51784 AL161734.1-201ENST00000609720 557 ntBASIC5.97□□□□□ -1.45
USP11P51784 SDR42E1P1-201ENST00000611327 477 ntBASIC5.97□□□□□ -1.45
USP11P51784 uc_338.5-201ENST00000611839 155 ntBASIC5.97□□□□□ -1.45
USP11P51784 AC009248.2-201ENST00000619826 254 ntBASIC5.97□□□□□ -1.45
USP11P51784 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC5.97□□□□□ -1.45
USP11P51784 AC135068.12-201ENST00000637370 931 ntBASIC5.97□□□□□ -1.45
USP11P51784 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
USP11P51784 AC093311.1-201ENST00000506586 2021 ntBASIC5.97□□□□□ -1.45
USP11P51784 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.97□□□□□ -1.45
USP11P51784 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
USP11P51784 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
USP11P51784 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.97□□□□□ -1.45
USP11P51784 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
USP11P51784 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.97□□□□□ -1.45
USP11P51784 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.96□□□□□ -1.45
USP11P51784 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
USP11P51784 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
USP11P51784 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
USP11P51784 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC5.96□□□□□ -1.45
USP11P51784 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
USP11P51784 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
USP11P51784 AC023421.1-201ENST00000590535 1785 ntBASIC5.96□□□□□ -1.46
USP11P51784 PANDAR-201ENST00000629595 1506 ntBASIC5.96□□□□□ -1.46
USP11P51784 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
USP11P51784 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
USP11P51784 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
USP11P51784 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
USP11P51784 AC025574.1-201ENST00000554784 1653 ntBASIC5.96□□□□□ -1.46
USP11P51784 SNORA17.1-201ENST00000362945 126 ntBASIC5.96□□□□□ -1.46
USP11P51784 Y_RNA.128-201ENST00000363391 112 ntBASIC5.96□□□□□ -1.46
USP11P51784 U3.7-201ENST00000363668 216 ntBASIC5.96□□□□□ -1.46
USP11P51784 RNU1-74P-201ENST00000384108 171 ntBASIC5.96□□□□□ -1.46
USP11P51784 MIR506-201ENST00000384998 124 ntBASIC5.96□□□□□ -1.46
USP11P51784 MIR1305-201ENST00000408300 86 ntBASIC5.96□□□□□ -1.46
USP11P51784 MIR1182-201ENST00000408363 97 ntBASIC5.96□□□□□ -1.46
USP11P51784 AC073264.1-201ENST00000411508 416 ntBASIC5.96□□□□□ -1.46
USP11P51784 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC5.96□□□□□ -1.46
USP11P51784 COX6CP17-201ENST00000421389 185 ntBASIC5.96□□□□□ -1.46
USP11P51784 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC5.96□□□□□ -1.46
USP11P51784 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.96□□□□□ -1.46
USP11P51784 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.96□□□□□ -1.46
USP11P51784 NANOGP6-201ENST00000429190 847 ntBASIC5.96□□□□□ -1.46
USP11P51784 AL606489.2-201ENST00000433886 234 ntBASIC5.96□□□□□ -1.46
USP11P51784 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC5.96□□□□□ -1.46
USP11P51784 RPS27AP15-201ENST00000447672 466 ntBASIC5.96□□□□□ -1.46
USP11P51784 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC5.96□□□□□ -1.46
USP11P51784 RN7SL222P-201ENST00000476452 299 ntBASIC5.96□□□□□ -1.46
USP11P51784 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
USP11P51784 RPS15AP36-201ENST00000492022 382 ntBASIC5.96□□□□□ -1.46
USP11P51784 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC5.96□□□□□ -1.46
USP11P51784 RNA5SP92-201ENST00000516437 110 ntBASIC5.96□□□□□ -1.46
USP11P51784 RNU6-1003P-201ENST00000517099 105 ntBASIC5.96□□□□□ -1.46
USP11P51784 IGLV2-28-201ENST00000520681 304 ntBASIC5.96□□□□□ -1.46
USP11P51784 AC107953.1-201ENST00000522216 297 ntBASIC5.96□□□□□ -1.46
USP11P51784 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.96□□□□□ -1.46
USP11P51784 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC5.96□□□□□ -1.46
USP11P51784 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC5.96□□□□□ -1.46
USP11P51784 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.96□□□□□ -1.46
USP11P51784 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC5.96□□□□□ -1.46
USP11P51784 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC5.96□□□□□ -1.46
USP11P51784 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC5.96□□□□□ -1.46
USP11P51784 AC006116.10-201ENST00000591836 581 ntBASIC5.96□□□□□ -1.46
USP11P51784 TPMTP1-201ENST00000592307 737 ntBASIC5.96□□□□□ -1.46
USP11P51784 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.96□□□□□ -1.46
USP11P51784 AC136443.5-201ENST00000603741 370 ntBASIC5.96□□□□□ -1.46
USP11P51784 AL359999.1-201ENST00000604513 294 ntBASIC5.96□□□□□ -1.46
USP11P51784 AC011626.1-201ENST00000604710 562 ntBASIC5.96□□□□□ -1.46
USP11P51784 AP001521.1-201ENST00000609150 300 ntBASIC5.96□□□□□ -1.46
USP11P51784 AC023509.5-201ENST00000617434 807 ntBASIC5.96□□□□□ -1.46
USP11P51784 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC5.96□□□□□ -1.46
USP11P51784 TTK-211ENST00000627129 240 ntTSL 5 BASIC5.96□□□□□ -1.46
USP11P51784 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.96□□□□□ -1.46
USP11P51784 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
USP11P51784 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
USP11P51784 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
USP11P51784 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.96□□□□□ -1.46
USP11P51784 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.96□□□□□ -1.46
USP11P51784 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
USP11P51784 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
USP11P51784 CDC27P2-201ENST00000425026 1922 ntBASIC5.95□□□□□ -1.46
USP11P51784 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
USP11P51784 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
USP11P51784 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
USP11P51784 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
USP11P51784 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
USP11P51784 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
USP11P51784 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
USP11P51784 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.95□□□□□ -1.46
USP11P51784 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
USP11P51784 Y_RNA.184-201ENST00000363884 108 ntBASIC5.95□□□□□ -1.46
USP11P51784 OR1L6-202ENST00000373684 1044 ntBASIC5.95□□□□□ -1.46
USP11P51784 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC5.95□□□□□ -1.46
USP11P51784 SNORA69-201ENST00000383895 132 ntBASIC5.95□□□□□ -1.46
USP11P51784 RNU6-463P-201ENST00000384340 107 ntBASIC5.95□□□□□ -1.46
USP11P51784 MIR589-201ENST00000385238 99 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms